RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 DHX32Q7L7V1 743 aaKnown RBP20.34■□□□□ 0.85
HDDC3-206ENST00000561036 C2CD5Q86YS7 1000 aa20.34■□□□□ 0.85
HDDC3-206ENST00000561036 FOXD4L1Q9NU39 408 aa20.34■□□□□ 0.85
HDDC3-206ENST00000561036 COL11A2P13942 1736 aaPredicted RBP20.33■□□□□ 0.85
HDDC3-206ENST00000561036 ZNF213O14771 459 aa20.33■□□□□ 0.85
HDDC3-206ENST00000561036 IL1R1P14778 569 aa20.33■□□□□ 0.85
HDDC3-206ENST00000561036 RAB3GAP1Q15042 981 aa20.33■□□□□ 0.85
HDDC3-206ENST00000561036 NFKBIBQ15653 356 aa20.33■□□□□ 0.85
HDDC3-206ENST00000561036 TTLL5Q6EMB2 1281 aa20.33■□□□□ 0.85
HDDC3-206ENST00000561036 STOX1Q6ZVD7 989 aa20.33■□□□□ 0.85
HDDC3-206ENST00000561036 NACAP1Q9BZK3 213 aa20.33■□□□□ 0.85
HDDC3-206ENST00000561036 MAST2Q6P0Q8 1798 aa20.33■□□□□ 0.84
HDDC3-206ENST00000561036 CACNA1SQ13698 1873 aa20.33■□□□□ 0.84
HDDC3-206ENST00000561036 MAGEB6P1A0A0J9YX57 407 aa20.32■□□□□ 0.84
HDDC3-206ENST00000561036 APPP05067 770 aa20.32■□□□□ 0.84
HDDC3-206ENST00000561036 CHAF1AQ13111 956 aaPredicted RBP20.32■□□□□ 0.84
HDDC3-206ENST00000561036 NOL8Q76FK4 1167 aaKnown RBP20.32■□□□□ 0.84
HDDC3-206ENST00000561036 FBXL16Q8N461 479 aa20.32■□□□□ 0.84
HDDC3-206ENST00000561036 NSUN4Q96CB9 384 aaKnown RBP20.32■□□□□ 0.84
HDDC3-206ENST00000561036 ARMT1Q9H993 441 aa20.32■□□□□ 0.84
HDDC3-206ENST00000561036 CD209Q9NNX6 404 aa20.32■□□□□ 0.84
HDDC3-206ENST00000561036 POLLQ9UGP5 575 aa20.32■□□□□ 0.84
HDDC3-206ENST00000561036 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.32■□□□□ 0.84
HDDC3-206ENST00000561036 EXOSC10Q01780 885 aaKnown RBP20.31■□□□□ 0.84
HDDC3-206ENST00000561036 IFNL3Q8IZI9 196 aa20.31■□□□□ 0.84
HDDC3-206ENST00000561036 CNKSR1Q969H4 720 aa20.31■□□□□ 0.84
HDDC3-206ENST00000561036 WDR19Q8NEZ3 1342 aa20.3■□□□□ 0.84
HDDC3-206ENST00000561036 GSG1L2A8MUP6 293 aa20.3■□□□□ 0.84
HDDC3-206ENST00000561036 C6orf229H3BNL8 230 aa20.3■□□□□ 0.84
HDDC3-206ENST00000561036 MECOMQ03112 1051 aa20.3■□□□□ 0.84
HDDC3-206ENST00000561036 TOB2Q14106 344 aaPredicted RBP20.3■□□□□ 0.84
HDDC3-206ENST00000561036 SLC51AQ86UW1 340 aa20.3■□□□□ 0.84
HDDC3-206ENST00000561036 LCORLQ8N3X6 602 aa20.3■□□□□ 0.84
HDDC3-206ENST00000561036 MPNDQ8N594 471 aa20.3■□□□□ 0.84
HDDC3-206ENST00000561036 AGXT2Q9BYV1 514 aa20.3■□□□□ 0.84
HDDC3-206ENST00000561036 SLC4A4Q9Y6R1 1079 aa20.3■□□□□ 0.84
HDDC3-206ENST00000561036 LAMA4Q16363 1823 aa20.3■□□□□ 0.84
HDDC3-206ENST00000561036 GSTO1P78417 241 aa20.29■□□□□ 0.84
HDDC3-206ENST00000561036 GIMAP6Q6P9H5 292 aa20.29■□□□□ 0.84
HDDC3-206ENST00000561036 NCOA7Q8NI08 942 aa20.29■□□□□ 0.84
HDDC3-206ENST00000561036 ZNF622Q969S3 477 aaKnown RBP eCLIP20.29■□□□□ 0.84
HDDC3-206ENST00000561036 RIOK1Q9BRS2 568 aaKnown RBP20.29■□□□□ 0.84
HDDC3-206ENST00000561036 COA1Q9GZY4 146 aa20.29■□□□□ 0.84
HDDC3-206ENST00000561036 NAPBQ9H115 298 aa20.29■□□□□ 0.84
HDDC3-206ENST00000561036 KIAA1551Q9HCM1 1747 aa20.29■□□□□ 0.84
HDDC3-206ENST00000561036 A0A0G2JLW4 131 aa20.28■□□□□ 0.84
HDDC3-206ENST00000561036 LDHBP07195 334 aaKnown RBP20.28■□□□□ 0.84
HDDC3-206ENST00000561036 DPP8Q6V1X1 898 aaPredicted RBP20.28■□□□□ 0.84
HDDC3-206ENST00000561036 Q6ZUG5 572 aa20.28■□□□□ 0.84
HDDC3-206ENST00000561036 ADGRA1Q86SQ6 560 aa20.28■□□□□ 0.84
HDDC3-206ENST00000561036 MIGA1Q8NAN2 632 aa20.28■□□□□ 0.84
HDDC3-206ENST00000561036 ZNF384Q8TF68 577 aa20.28■□□□□ 0.84
HDDC3-206ENST00000561036 TBC1D22AQ8WUA7 517 aa20.28■□□□□ 0.84
HDDC3-206ENST00000561036 EYA3Q99504 573 aa20.28■□□□□ 0.84
HDDC3-206ENST00000561036 EPB41L4AQ9HCS5 686 aaPredicted RBP20.28■□□□□ 0.84
HDDC3-206ENST00000561036 TPCN1Q9ULQ1 816 aa20.28■□□□□ 0.84
HDDC3-206ENST00000561036 CCDC88AQ3V6T2 1871 aa20.28■□□□□ 0.84
HDDC3-206ENST00000561036 FAM205AQ6ZU69 1335 aa20.27■□□□□ 0.84
HDDC3-206ENST00000561036 C10orf71Q711Q0 1435 aa20.27■□□□□ 0.84
HDDC3-206ENST00000561036 MCM5P33992 734 aa20.27■□□□□ 0.84
HDDC3-206ENST00000561036 HAND2P61296 217 aa20.27■□□□□ 0.84
HDDC3-206ENST00000561036 TRDNQ13061 729 aa20.27■□□□□ 0.84
HDDC3-206ENST00000561036 ME3Q16798 604 aa20.27■□□□□ 0.84
HDDC3-206ENST00000561036 CC2D2BQ6DHV5 1058 aa20.27■□□□□ 0.84
HDDC3-206ENST00000561036 RALYLQ86SE5 291 aaKnown RBP20.27■□□□□ 0.84
HDDC3-206ENST00000561036 DZIP1Q86YF9 867 aaKnown RBP20.27■□□□□ 0.84
HDDC3-206ENST00000561036 CERS3Q8IU89 383 aa20.27■□□□□ 0.84
HDDC3-206ENST00000561036 CHMP4CQ96CF2 233 aa20.27■□□□□ 0.84
HDDC3-206ENST00000561036 GPR101Q96P66 508 aaPredicted RBP20.27■□□□□ 0.84
HDDC3-206ENST00000561036 LDHCP07864 332 aa20.26■□□□□ 0.83
HDDC3-206ENST00000561036 PDIA4P13667 645 aaKnown RBP20.26■□□□□ 0.83
HDDC3-206ENST00000561036 PRDX5P30044 214 aa20.26■□□□□ 0.83
HDDC3-206ENST00000561036 TDO2P48775 406 aa20.26■□□□□ 0.83
HDDC3-206ENST00000561036 FGD1P98174 961 aa20.26■□□□□ 0.83
HDDC3-206ENST00000561036 COL9A3Q14050 684 aaPredicted RBP20.26■□□□□ 0.83
HDDC3-206ENST00000561036 NBR1Q14596 966 aa20.26■□□□□ 0.83
HDDC3-206ENST00000561036 GRIPAP1Q4V328 841 aa20.26■□□□□ 0.83
HDDC3-206ENST00000561036 CLEC17AQ6ZS10 378 aa20.26■□□□□ 0.83
HDDC3-206ENST00000561036 MB21D2Q8IYB1 491 aaPredicted RBP20.26■□□□□ 0.83
HDDC3-206ENST00000561036 ZC3H12CQ9C0D7 883 aaKnown RBP20.26■□□□□ 0.83
HDDC3-206ENST00000561036 LARGE1O95461 756 aa20.25■□□□□ 0.83
HDDC3-206ENST00000561036 TNPO1Q92973 898 aaKnown RBP20.25■□□□□ 0.83
HDDC3-206ENST00000561036 TCEANC2Q96MN5 208 aa20.25■□□□□ 0.83
HDDC3-206ENST00000561036 GBP4Q96PP9 640 aa20.25■□□□□ 0.83
HDDC3-206ENST00000561036 CRNKL1Q9BZJ0 848 aaKnown RBP20.25■□□□□ 0.83
HDDC3-206ENST00000561036 NBPF3Q9H094 633 aa20.25■□□□□ 0.83
HDDC3-206ENST00000561036 CNNM2Q9H8M5 875 aa20.25■□□□□ 0.83
HDDC3-206ENST00000561036 ANAPC4Q9UJX5 808 aa20.25■□□□□ 0.83
HDDC3-206ENST00000561036 SMC3Q9UQE7 1217 aa20.25■□□□□ 0.83
HDDC3-206ENST00000561036 SUGT1Q9Y2Z0 365 aa20.25■□□□□ 0.83
HDDC3-206ENST00000561036 TIAM2Q8IVF5 1701 aa20.24■□□□□ 0.83
HDDC3-206ENST00000561036 PRKAB2O43741 272 aa20.24■□□□□ 0.83
HDDC3-206ENST00000561036 EVCP57679 992 aa20.24■□□□□ 0.83
HDDC3-206ENST00000561036 LARP6Q9BRS8 491 aaKnown RBP20.24■□□□□ 0.83
HDDC3-206ENST00000561036 PPP4CP60510 307 aa20.23■□□□□ 0.83
HDDC3-206ENST00000561036 TBC1D10CQ8IV04 446 aa20.23■□□□□ 0.83
HDDC3-206ENST00000561036 CCDC83Q8IWF9 413 aa20.23■□□□□ 0.83
HDDC3-206ENST00000561036 SLF2Q8IX21 1173 aa20.23■□□□□ 0.83
HDDC3-206ENST00000561036 ZNF274Q96GC6 653 aaPredicted RBP20.23■□□□□ 0.83
HDDC3-206ENST00000561036 RTFDC1Q9BY42 306 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms