RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 TOPAZ1Q8N9V7 1692 aa18.99■□□□□ 0.63
TPM1-228ENST00000560975 ANO1Q5XXA6 986 aa18.98■□□□□ 0.63
TPM1-228ENST00000560975 INTS13Q9NVM9 706 aa18.98■□□□□ 0.63
TPM1-228ENST00000560975 N4BP1O75113 896 aaKnown RBP18.98■□□□□ 0.63
TPM1-228ENST00000560975 MYL6BP14649 208 aa18.98■□□□□ 0.63
TPM1-228ENST00000560975 TXLNAP40222 546 aa18.98■□□□□ 0.63
TPM1-228ENST00000560975 NOP2P46087 812 aaKnown RBP18.98■□□□□ 0.63
TPM1-228ENST00000560975 WWC2Q6AWC2 1192 aa18.98■□□□□ 0.63
TPM1-228ENST00000560975 KIFC2Q96AC6 838 aa18.98■□□□□ 0.63
TPM1-228ENST00000560975 EFCC1Q9HA90 598 aa18.98■□□□□ 0.63
TPM1-228ENST00000560975 SUGCTQ9HAC7 445 aa18.98■□□□□ 0.63
TPM1-228ENST00000560975 FCHSD1Q86WN1 690 aa18.97■□□□□ 0.63
TPM1-228ENST00000560975 ZNF274Q96GC6 653 aaPredicted RBP18.97■□□□□ 0.63
TPM1-228ENST00000560975 NCAPD2Q15021 1401 aa18.97■□□□□ 0.63
TPM1-228ENST00000560975 DDX58O95786 925 aaKnown RBP18.97■□□□□ 0.63
TPM1-228ENST00000560975 CMA1P23946 247 aa18.97■□□□□ 0.63
TPM1-228ENST00000560975 OLFM4Q6UX06 510 aa18.97■□□□□ 0.63
TPM1-228ENST00000560975 PTPRUQ92729 1446 aa18.97■□□□□ 0.63
TPM1-228ENST00000560975 ANKRD65E5RJM6 399 aa18.96■□□□□ 0.63
TPM1-228ENST00000560975 HAND2P61296 217 aa18.96■□□□□ 0.63
TPM1-228ENST00000560975 MYD88Q99836 296 aa18.96■□□□□ 0.63
TPM1-228ENST00000560975 AGXT2Q9BYV1 514 aa18.96■□□□□ 0.63
TPM1-228ENST00000560975 LZTFL1Q9NQ48 299 aa18.96■□□□□ 0.63
TPM1-228ENST00000560975 MTF1Q14872 753 aa18.96■□□□□ 0.63
TPM1-228ENST00000560975 LRRC59Q96AG4 307 aaKnown RBP18.96■□□□□ 0.63
TPM1-228ENST00000560975 NEUROD6Q96NK8 337 aa18.96■□□□□ 0.63
TPM1-228ENST00000560975 HAUS7Q99871 368 aa18.96■□□□□ 0.63
TPM1-228ENST00000560975 KBTBD3Q8NAB2 608 aa18.95■□□□□ 0.62
TPM1-228ENST00000560975 ESF1Q9H501 851 aaKnown RBP18.95■□□□□ 0.62
TPM1-228ENST00000560975 UTYO14607 1347 aa18.95■□□□□ 0.62
TPM1-228ENST00000560975 CCDC151A5D8V7 595 aa18.95■□□□□ 0.62
TPM1-228ENST00000560975 PHACTR2O75167 634 aa18.95■□□□□ 0.62
TPM1-228ENST00000560975 HSPD1P10809 573 aaKnown RBP18.95■□□□□ 0.62
TPM1-228ENST00000560975 CHMP4BP1P59074 171 aa18.95■□□□□ 0.62
TPM1-228ENST00000560975 PDE4BQ07343 736 aa18.95■□□□□ 0.62
TPM1-228ENST00000560975 MRPL44Q9H9J2 332 aaKnown RBP18.95■□□□□ 0.62
TPM1-228ENST00000560975 PSD3Q9NYI0 1048 aa18.95■□□□□ 0.62
TPM1-228ENST00000560975 FAN1Q9Y2M0 1017 aa18.95■□□□□ 0.62
TPM1-228ENST00000560975 LAMA4Q16363 1823 aa18.95■□□□□ 0.62
TPM1-228ENST00000560975 CLIC6Q96NY7 704 aa18.95■□□□□ 0.62
TPM1-228ENST00000560975 PTPN12Q05209 780 aaKnown RBP18.94■□□□□ 0.62
TPM1-228ENST00000560975 TC2NQ8N9U0 490 aa18.94■□□□□ 0.62
TPM1-228ENST00000560975 TUBE1Q9UJT0 475 aa18.94■□□□□ 0.62
TPM1-228ENST00000560975 KLF18A0A0U1RQI7 1052 aa18.94■□□□□ 0.62
TPM1-228ENST00000560975 A0A0U1RQJ8 604 aa18.94■□□□□ 0.62
TPM1-228ENST00000560975 GOLGA6L9A6NEM1 432 aa18.94■□□□□ 0.62
TPM1-228ENST00000560975 NEURL1BA8MQ27 555 aa18.94■□□□□ 0.62
TPM1-228ENST00000560975 GOLGA8BA8MQT2 603 aa18.94■□□□□ 0.62
TPM1-228ENST00000560975 MAP2K7O14733 419 aa18.94■□□□□ 0.62
TPM1-228ENST00000560975 CPLX1O14810 134 aa18.94■□□□□ 0.62
TPM1-228ENST00000560975 TFRCP02786 760 aaKnown RBP18.94■□□□□ 0.62
TPM1-228ENST00000560975 CDC27P30260 824 aa18.94■□□□□ 0.62
TPM1-228ENST00000560975 NEXNQ0ZGT2 675 aa18.94■□□□□ 0.62
TPM1-228ENST00000560975 ATRIPQ8WXE1 791 aa18.94■□□□□ 0.62
TPM1-228ENST00000560975 BRD3Q15059 726 aa18.93■□□□□ 0.62
TPM1-228ENST00000560975 AIFM3Q96NN9 605 aa18.93■□□□□ 0.62
TPM1-228ENST00000560975 PNKPQ96T60 521 aa18.93■□□□□ 0.62
TPM1-228ENST00000560975 PIK3C2AO00443 1686 aa18.93■□□□□ 0.62
TPM1-228ENST00000560975 FOXN1O15353 648 aa18.93■□□□□ 0.62
TPM1-228ENST00000560975 GTF2A1P52655 376 aaPredicted RBP18.93■□□□□ 0.62
TPM1-228ENST00000560975 GCKRQ14397 625 aa18.93■□□□□ 0.62
TPM1-228ENST00000560975 AKAP4Q5JQC9 854 aa18.93■□□□□ 0.62
TPM1-228ENST00000560975 JAKMIP3Q5VZ66 844 aa18.93■□□□□ 0.62
TPM1-228ENST00000560975 SHC4Q6S5L8 630 aa18.93■□□□□ 0.62
TPM1-228ENST00000560975 RNMTO43148 476 aaKnown RBP18.92■□□□□ 0.62
TPM1-228ENST00000560975 PIP4K2AP48426 406 aaPredicted RBP18.92■□□□□ 0.62
TPM1-228ENST00000560975 KIF23Q02241 960 aaPredicted RBP18.92■□□□□ 0.62
TPM1-228ENST00000560975 BRAPQ7Z569 592 aa18.92■□□□□ 0.62
TPM1-228ENST00000560975 PLEKHA4Q9H4M7 779 aa18.92■□□□□ 0.62
TPM1-228ENST00000560975 ANKZF1Q9H8Y5 726 aa18.92■□□□□ 0.62
TPM1-228ENST00000560975 SH3TC1Q8TE82 1336 aa18.92■□□□□ 0.62
TPM1-228ENST00000560975 ADAMTS13Q76LX8 1427 aa18.92■□□□□ 0.62
TPM1-228ENST00000560975 STX10O60499 249 aa18.92■□□□□ 0.62
TPM1-228ENST00000560975 RHOXF2BP0C7M4 288 aa18.92■□□□□ 0.62
TPM1-228ENST00000560975 LTKP29376 864 aa18.92■□□□□ 0.62
TPM1-228ENST00000560975 BEND6Q5SZJ8 279 aaPredicted RBP18.92■□□□□ 0.62
TPM1-228ENST00000560975 FOXP4Q8IVH2 680 aaPredicted RBP18.92■□□□□ 0.62
TPM1-228ENST00000560975 TRMT44Q8IYL2 757 aaKnown RBP18.92■□□□□ 0.62
TPM1-228ENST00000560975 GOLGA6L1Q8N7Z2 621 aa18.92■□□□□ 0.62
TPM1-228ENST00000560975 RHOXF2Q9BQY4 288 aa18.92■□□□□ 0.62
TPM1-228ENST00000560975 DSCC1Q9BVC3 393 aa18.92■□□□□ 0.62
TPM1-228ENST00000560975 ABCB6Q9NP58 842 aa18.92■□□□□ 0.62
TPM1-228ENST00000560975 COPRSQ9NQ92 184 aa18.92■□□□□ 0.62
TPM1-228ENST00000560975 AMOTL2Q9Y2J4 779 aa18.92■□□□□ 0.62
TPM1-228ENST00000560975 PCDHA5Q9Y5H7 936 aa18.92■□□□□ 0.62
TPM1-228ENST00000560975 SKIDA1Q1XH10 827 aa18.91■□□□□ 0.62
TPM1-228ENST00000560975 LONRF3Q496Y0 759 aa18.91■□□□□ 0.62
TPM1-228ENST00000560975 HDXQ7Z353 690 aa18.91■□□□□ 0.62
TPM1-228ENST00000560975 CCDC102AQ96A19 550 aa18.91■□□□□ 0.62
TPM1-228ENST00000560975 DDX21Q9NR30 783 aaKnown RBP eCLIP18.91■□□□□ 0.62
TPM1-228ENST00000560975 PAG1Q9NWQ8 432 aa18.91■□□□□ 0.62
TPM1-228ENST00000560975 SOWAHDA6NJG2 315 aa18.91■□□□□ 0.62
TPM1-228ENST00000560975 CUTAO60888 179 aa18.91■□□□□ 0.62
TPM1-228ENST00000560975 TBX2Q13207 712 aaPredicted RBP18.91■□□□□ 0.62
TPM1-228ENST00000560975 SLC39A14Q15043 492 aa18.91■□□□□ 0.62
TPM1-228ENST00000560975 C1orf141Q5JVX7 400 aa18.91■□□□□ 0.62
TPM1-228ENST00000560975 SPECC1Q5M775 1068 aa18.91■□□□□ 0.62
TPM1-228ENST00000560975 SRGAP1Q7Z6B7 1085 aa18.91■□□□□ 0.62
TPM1-228ENST00000560975 METTL16Q86W50 562 aaKnown RBP18.91■□□□□ 0.62
TPM1-228ENST00000560975 UBE3BQ7Z3V4 1068 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms