RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 KANSL3Q9P2N6 904 aa8.21□□□□□ -1.1
PSMA4-221ENST00000560842 SOX13Q9UN79 622 aa8.21□□□□□ -1.1
PSMA4-221ENST00000560842 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.21□□□□□ -1.1
PSMA4-221ENST00000560842 PDE2AO00408 941 aaPredicted RBP8.2□□□□□ -1.1
PSMA4-221ENST00000560842 CYP26A1O43174 497 aa8.2□□□□□ -1.1
PSMA4-221ENST00000560842 USP5P45974 858 aa8.2□□□□□ -1.1
PSMA4-221ENST00000560842 AEBP1Q8IUX7 1158 aa8.2□□□□□ -1.1
PSMA4-221ENST00000560842 CITED4Q96RK1 184 aa8.2□□□□□ -1.1
PSMA4-221ENST00000560842 GGNBP2Q9H3C7 697 aa8.2□□□□□ -1.1
PSMA4-221ENST00000560842 POLIQ9UNA4 740 aa8.2□□□□□ -1.1
PSMA4-221ENST00000560842 ACPPP15309 386 aa8.19□□□□□ -1.1
PSMA4-221ENST00000560842 DNM1Q05193 864 aaKnown RBP8.19□□□□□ -1.1
PSMA4-221ENST00000560842 AGBL5Q8NDL9 886 aa8.19□□□□□ -1.1
PSMA4-221ENST00000560842 SOX1O00570 391 aaPredicted RBP8.18□□□□□ -1.1
PSMA4-221ENST00000560842 IGHA2P01877 340 aa8.18□□□□□ -1.1
PSMA4-221ENST00000560842 PCSK2P16519 638 aa8.18□□□□□ -1.1
PSMA4-221ENST00000560842 CDPF1Q6NVV7 123 aa8.18□□□□□ -1.1
PSMA4-221ENST00000560842 ZNF438Q7Z4V0 828 aa8.18□□□□□ -1.1
PSMA4-221ENST00000560842 ADMP35318 185 aa8.17□□□□□ -1.1
PSMA4-221ENST00000560842 USP11P51784 963 aa8.17□□□□□ -1.1
PSMA4-221ENST00000560842 EHHADHQ08426 723 aa8.17□□□□□ -1.1
PSMA4-221ENST00000560842 LCE4AQ5TA78 99 aa8.17□□□□□ -1.1
PSMA4-221ENST00000560842 ZAR1Q86SH2 424 aa8.17□□□□□ -1.1
PSMA4-221ENST00000560842 C1orf127Q8N9H9 656 aa8.17□□□□□ -1.1
PSMA4-221ENST00000560842 TMEM102Q8N9M5 508 aaPredicted RBP8.17□□□□□ -1.1
PSMA4-221ENST00000560842 FBLIM1Q8WUP2 373 aa8.17□□□□□ -1.1
PSMA4-221ENST00000560842 HHIPQ96QV1 700 aa8.17□□□□□ -1.1
PSMA4-221ENST00000560842 FAM129BQ96TA1 746 aa8.17□□□□□ -1.1
PSMA4-221ENST00000560842 RBCK1Q9BYM8 510 aa8.17□□□□□ -1.1
PSMA4-221ENST00000560842 PAK6Q9NQU5 681 aaPredicted RBP8.17□□□□□ -1.1
PSMA4-221ENST00000560842 LOC100289279A0A1B0GTE1 492 aa8.16□□□□□ -1.1
PSMA4-221ENST00000560842 TRPA1O75762 1119 aa8.16□□□□□ -1.1
PSMA4-221ENST00000560842 DLGAP3O95886 979 aa8.16□□□□□ -1.1
PSMA4-221ENST00000560842 DRD2P14416 443 aa8.16□□□□□ -1.1
PSMA4-221ENST00000560842 CES1P23141 567 aa8.16□□□□□ -1.1
PSMA4-221ENST00000560842 EXOSC6Q5RKV6 272 aaKnown RBP8.16□□□□□ -1.1
PSMA4-221ENST00000560842 FLCNQ8NFG4 579 aa8.16□□□□□ -1.1
PSMA4-221ENST00000560842 EZH1Q92800 747 aaPredicted RBP8.16□□□□□ -1.1
PSMA4-221ENST00000560842 TBC1D32Q96NH3 1257 aa8.16□□□□□ -1.1
PSMA4-221ENST00000560842 PRKAG2Q9UGJ0 569 aa8.16□□□□□ -1.1
PSMA4-221ENST00000560842 BRPF3Q9ULD4 1205 aa8.16□□□□□ -1.1
PSMA4-221ENST00000560842 NDUFB5O43674 189 aa8.15□□□□□ -1.1
PSMA4-221ENST00000560842 AAMPQ13685 434 aa8.15□□□□□ -1.1
PSMA4-221ENST00000560842 IKBKEQ14164 716 aa8.15□□□□□ -1.1
PSMA4-221ENST00000560842 SND1Q7KZF4 910 aaKnown RBP eCLIP8.15□□□□□ -1.13e-8■■□□□ 11.8
PSMA4-221ENST00000560842 VN1R5Q7Z5H4 357 aa8.15□□□□□ -1.1
PSMA4-221ENST00000560842 BSNDQ8WZ55 320 aa8.15□□□□□ -1.1
PSMA4-221ENST00000560842 NXPE3Q969Y0 559 aa8.15□□□□□ -1.1
PSMA4-221ENST00000560842 C2CD4AQ8NCU7 369 aaPredicted RBP8.14□□□□□ -1.11
PSMA4-221ENST00000560842 GATA6Q92908 595 aa8.14□□□□□ -1.11
PSMA4-221ENST00000560842 USP26Q9BXU7 913 aa8.14□□□□□ -1.11
PSMA4-221ENST00000560842 SOX17Q9H6I2 414 aaPredicted RBP8.14□□□□□ -1.11
PSMA4-221ENST00000560842 DCTN4Q9UJW0 460 aa8.14□□□□□ -1.11
PSMA4-221ENST00000560842 FAM170BA6NMN3 283 aa8.13□□□□□ -1.11
PSMA4-221ENST00000560842 PAPLNO95428 1278 aa8.13□□□□□ -1.11
PSMA4-221ENST00000560842 PMEPA1Q969W9 287 aa8.13□□□□□ -1.11
PSMA4-221ENST00000560842 YIPF2Q9BWQ6 316 aa8.13□□□□□ -1.11
PSMA4-221ENST00000560842 A6NHS1 94 aa8.12□□□□□ -1.11
PSMA4-221ENST00000560842 TNFRSF21O75509 655 aa8.12□□□□□ -1.11
PSMA4-221ENST00000560842 SOX4Q06945 474 aaPredicted RBP8.12□□□□□ -1.11
PSMA4-221ENST00000560842 PDE3BQ13370 1112 aa8.12□□□□□ -1.11
PSMA4-221ENST00000560842 C8orf34Q49A92 452 aa8.12□□□□□ -1.11
PSMA4-221ENST00000560842 DUSP27Q5VZP5 1158 aa8.12□□□□□ -1.11
PSMA4-221ENST00000560842 ALKBH8Q96BT7 664 aaKnown RBP8.12□□□□□ -1.11
PSMA4-221ENST00000560842 CHRDQ9H2X0 955 aa8.12□□□□□ -1.11
PSMA4-221ENST00000560842 BIN2Q9UBW5 565 aaPredicted RBP8.12□□□□□ -1.11
PSMA4-221ENST00000560842 ZC3H7BQ9UGR2 993 aaKnown RBP8.12□□□□□ -1.11
PSMA4-221ENST00000560842 FBLN7Q53RD9 439 aa8.11□□□□□ -1.11
PSMA4-221ENST00000560842 ZNF648Q5T619 568 aaPredicted RBP8.11□□□□□ -1.11
PSMA4-221ENST00000560842 OSMRQ99650 979 aa8.11□□□□□ -1.11
PSMA4-221ENST00000560842 CYP27A1Q02318 531 aa8.1□□□□□ -1.11
PSMA4-221ENST00000560842 TTC16Q8NEE8 873 aa8.1□□□□□ -1.11
PSMA4-221ENST00000560842 DMRTB1Q96MA1 342 aa8.1□□□□□ -1.11
PSMA4-221ENST00000560842 DBX1A6NMT0 343 aa8.09□□□□□ -1.11
PSMA4-221ENST00000560842 GPR182O15218 404 aa8.09□□□□□ -1.11
PSMA4-221ENST00000560842 DSC3Q14574 896 aa8.09□□□□□ -1.11
PSMA4-221ENST00000560842 TMC7Q7Z402 723 aa8.09□□□□□ -1.11
PSMA4-221ENST00000560842 SNX29Q8TEQ0 813 aa8.09□□□□□ -1.11
PSMA4-221ENST00000560842 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.09□□□□□ -1.11
PSMA4-221ENST00000560842 BIN1O00499 593 aa8.08□□□□□ -1.12
PSMA4-221ENST00000560842 ESRRAP11474 423 aaPredicted RBP8.08□□□□□ -1.12
PSMA4-221ENST00000560842 ASB16Q96NS5 453 aa8.08□□□□□ -1.12
PSMA4-221ENST00000560842 ZKSCAN3Q9BRR0 538 aa8.08□□□□□ -1.12
PSMA4-221ENST00000560842 ZFYVE28Q9HCC9 887 aa8.08□□□□□ -1.12
PSMA4-221ENST00000560842 CARMIL2Q6F5E8 1435 aa8.08□□□□□ -1.12
PSMA4-221ENST00000560842 TREHO43280 583 aa8.07□□□□□ -1.12
PSMA4-221ENST00000560842 EIF4EBP3O60516 100 aaPredicted RBP8.07□□□□□ -1.12
PSMA4-221ENST00000560842 NEFLP07196 543 aa8.07□□□□□ -1.12
PSMA4-221ENST00000560842 MAPK1P28482 360 aa8.07□□□□□ -1.12
PSMA4-221ENST00000560842 MAP7Q14244 749 aa8.07□□□□□ -1.12
PSMA4-221ENST00000560842 ZNF124Q15973 351 aa8.07□□□□□ -1.12
PSMA4-221ENST00000560842 SPOCD1Q6ZMY3 1216 aa8.07□□□□□ -1.12
PSMA4-221ENST00000560842 BCL7CQ8WUZ0 217 aaPredicted RBP8.07□□□□□ -1.12
PSMA4-221ENST00000560842 GZF1Q9H116 711 aaPredicted RBP8.07□□□□□ -1.12
PSMA4-221ENST00000560842 LRRC4CQ9HCJ2 640 aa8.07□□□□□ -1.12
PSMA4-221ENST00000560842 FOXD3Q9UJU5 478 aaPredicted RBP8.07□□□□□ -1.12
PSMA4-221ENST00000560842 SLC5A6Q9Y289 635 aa8.07□□□□□ -1.12
PSMA4-221ENST00000560842 NFICP08651 508 aa8.06□□□□□ -1.12
PSMA4-221ENST00000560842 ADH5P11766 374 aa8.06□□□□□ -1.12
PSMA4-221ENST00000560842 ZNF765Q7L2R6 523 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms