RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 TAOK3Q9H2K8 898 aa7.88□□□□□ -1.15
AP4E1-203ENST00000560508 SAMM50Q9Y512 469 aa7.88□□□□□ -1.15
AP4E1-203ENST00000560508 SYT1P21579 422 aa7.88□□□□□ -1.15
AP4E1-203ENST00000560508 GNA11P29992 359 aa7.88□□□□□ -1.15
AP4E1-203ENST00000560508 TRAPPC3LQ5T215 181 aa7.88□□□□□ -1.15
AP4E1-203ENST00000560508 FERMT2Q96AC1 680 aa7.88□□□□□ -1.15
AP4E1-203ENST00000560508 F8W031 263 aaPredicted RBP7.88□□□□□ -1.15
AP4E1-203ENST00000560508 TCERG1LQ5VWI1 586 aa7.88□□□□□ -1.15
AP4E1-203ENST00000560508 KRI1Q8N9T8 703 aaKnown RBP7.88□□□□□ -1.15
AP4E1-203ENST00000560508 GOPCQ9HD26 462 aa7.88□□□□□ -1.15
AP4E1-203ENST00000560508 NPHP4O75161 1426 aaPredicted RBP7.88□□□□□ -1.15
AP4E1-203ENST00000560508 IBTKQ9P2D0 1353 aaPredicted RBP7.88□□□□□ -1.15
AP4E1-203ENST00000560508 NEBLO76041 1014 aa7.88□□□□□ -1.15
AP4E1-203ENST00000560508 DEXIO95424 95 aa7.88□□□□□ -1.15
AP4E1-203ENST00000560508 PARP1P09874 1014 aaKnown RBP7.88□□□□□ -1.15
AP4E1-203ENST00000560508 CLCN1P35523 988 aa7.88□□□□□ -1.15
AP4E1-203ENST00000560508 SKILP12757 684 aa7.87□□□□□ -1.15
AP4E1-203ENST00000560508 MCM7P33993 719 aa7.87□□□□□ -1.15
AP4E1-203ENST00000560508 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.87□□□□□ -1.15
AP4E1-203ENST00000560508 LPIN2Q92539 896 aa7.87□□□□□ -1.15
AP4E1-203ENST00000560508 FAM89AQ96GI7 184 aa7.87□□□□□ -1.15
AP4E1-203ENST00000560508 FAM227BQ96M60 508 aa7.87□□□□□ -1.15
AP4E1-203ENST00000560508 ZKSCAN5Q9Y2L8 839 aa7.87□□□□□ -1.15
AP4E1-203ENST00000560508 PPRC1Q5VV67 1664 aaKnown RBP7.87□□□□□ -1.15
AP4E1-203ENST00000560508 LTKP29376 864 aa7.87□□□□□ -1.15
AP4E1-203ENST00000560508 ASIC1P78348 528 aa7.87□□□□□ -1.15
AP4E1-203ENST00000560508 DTHD1Q6ZMT9 781 aa7.87□□□□□ -1.15
AP4E1-203ENST00000560508 KBTBD3Q8NAB2 608 aa7.87□□□□□ -1.15
AP4E1-203ENST00000560508 SMARCC2Q8TAQ2 1214 aa7.87□□□□□ -1.15
AP4E1-203ENST00000560508 CCDC87Q9NVE4 849 aa7.87□□□□□ -1.15
AP4E1-203ENST00000560508 ANKRD62A6NC57 917 aa7.87□□□□□ -1.15
AP4E1-203ENST00000560508 HSPA4P34932 840 aa7.87□□□□□ -1.15
AP4E1-203ENST00000560508 ZNF830Q96NB3 372 aaPredicted RBP7.87□□□□□ -1.15
AP4E1-203ENST00000560508 DBNDD2Q9BQY9 259 aa7.87□□□□□ -1.15
AP4E1-203ENST00000560508 DSCC1Q9BVC3 393 aa7.87□□□□□ -1.15
AP4E1-203ENST00000560508 TTC12Q9H892 705 aaPredicted RBP7.87□□□□□ -1.15
AP4E1-203ENST00000560508 WDHD1O75717 1129 aaPredicted RBP7.87□□□□□ -1.15
AP4E1-203ENST00000560508 GNG11P61952 73 aa7.87□□□□□ -1.15
AP4E1-203ENST00000560508 IFFO1Q0D2I5 559 aa7.87□□□□□ -1.15
AP4E1-203ENST00000560508 CCDC91Q7Z6B0 441 aa7.87□□□□□ -1.15
AP4E1-203ENST00000560508 SH3TC1Q8TE82 1336 aa7.87□□□□□ -1.15
AP4E1-203ENST00000560508 GNPATO15228 680 aa7.87□□□□□ -1.15
AP4E1-203ENST00000560508 PHKG2P15735 406 aa7.87□□□□□ -1.15
AP4E1-203ENST00000560508 CBX1P83916 185 aa7.87□□□□□ -1.15
AP4E1-203ENST00000560508 CCDC186Q7Z3E2 898 aa7.87□□□□□ -1.15
AP4E1-203ENST00000560508 ARMT1Q9H993 441 aa7.87□□□□□ -1.15
AP4E1-203ENST00000560508 GPAA1O43292 621 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 ATP5JP18859 108 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 ZNF594Q96JF6 807 aaPredicted RBP7.86□□□□□ -1.15
AP4E1-203ENST00000560508 JADE2Q9NQC1 790 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 ARHGAP31Q2M1Z3 1444 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 B4E1Z4 1266 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 HIBADHP31937 336 aaKnown RBP7.86□□□□□ -1.15
AP4E1-203ENST00000560508 NOP2P46087 812 aaKnown RBP7.86□□□□□ -1.15
AP4E1-203ENST00000560508 TIMM10P62072 90 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 FAM160A1Q05DH4 1040 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 BICD1Q96G01 975 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 ANKARQ7Z5J8 1434 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 ERICH4A6NGS2 130 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 TMCO5BA8MYB1 307 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 PPP1R2P41236 205 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 USP37Q86T82 979 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 CEP112Q8N8E3 955 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 TSGA10Q9BZW7 698 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 ZC3H12CQ9C0D7 883 aaKnown RBP7.86□□□□□ -1.15
AP4E1-203ENST00000560508 SPDYE3A6NKU9 549 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 CTSWP56202 376 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 PAF1Q8N7H5 531 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 SRRTQ9BXP5 876 aaKnown RBP7.86□□□□□ -1.15
AP4E1-203ENST00000560508 ANGEL1Q9UNK9 670 aaKnown RBP7.86□□□□□ -1.15
AP4E1-203ENST00000560508 CCDC175P0C221 793 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 KRT13P13646 458 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 CPA1P15085 419 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 HSPA2P54652 639 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 BMS1Q14692 1282 aaKnown RBP7.86□□□□□ -1.15
AP4E1-203ENST00000560508 OGFOD1Q8N543 542 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 SPATA5Q8NB90 893 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 ZKSCAN3Q9BRR0 538 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 CLSTN2Q9H4D0 955 aa7.86□□□□□ -1.15
AP4E1-203ENST00000560508 CTAGE9A4FU28 777 aa7.85□□□□□ -1.15
AP4E1-203ENST00000560508 LIG1P18858 919 aa7.85□□□□□ -1.15
AP4E1-203ENST00000560508 RXRAP19793 462 aa7.85□□□□□ -1.15
AP4E1-203ENST00000560508 USP8P40818 1118 aa7.85□□□□□ -1.15
AP4E1-203ENST00000560508 KRT83P78385 493 aa7.85□□□□□ -1.15
AP4E1-203ENST00000560508 KRT79Q5XKE5 535 aa7.85□□□□□ -1.15
AP4E1-203ENST00000560508 CTR9Q6PD62 1173 aa7.85□□□□□ -1.15
AP4E1-203ENST00000560508 CCDC174Q6PII3 467 aa7.85□□□□□ -1.15
AP4E1-203ENST00000560508 CNBD1Q8NA66 436 aa7.85□□□□□ -1.15
AP4E1-203ENST00000560508 SELENOOQ9BVL4 669 aa7.85□□□□□ -1.15
AP4E1-203ENST00000560508 MAST3O60307 1309 aa7.85□□□□□ -1.15
AP4E1-203ENST00000560508 KIF20BQ96Q89 1820 aa7.85□□□□□ -1.15
AP4E1-203ENST00000560508 A1BGP04217 495 aa7.85□□□□□ -1.15
AP4E1-203ENST00000560508 TUBB4BP68371 445 aa7.85□□□□□ -1.15
AP4E1-203ENST00000560508 SSH3Q8TE77 659 aa7.85□□□□□ -1.15
AP4E1-203ENST00000560508 DYDC1Q8WWB3 177 aa7.85□□□□□ -1.15
AP4E1-203ENST00000560508 INO80Q9ULG1 1556 aaPredicted RBP7.85□□□□□ -1.15
AP4E1-203ENST00000560508 GIGYF1O75420 1035 aaPredicted RBP7.85□□□□□ -1.15
AP4E1-203ENST00000560508 GSPT1P15170 499 aaKnown RBP7.85□□□□□ -1.15
AP4E1-203ENST00000560508 MICALCLQ6ZW33 695 aa7.85□□□□□ -1.15
AP4E1-203ENST00000560508 KLHDC4Q8TBB5 520 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms