RNA–Protein interactions for RNA: ENST00000560469.5

PBX1-218, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 1,674 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-218ENST00000560469 ARMT1Q9H993 441 aa26.73■■□□□ 1.87
PBX1-218ENST00000560469 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.73■■□□□ 1.87
PBX1-218ENST00000560469 COL11A2P13942 1736 aaPredicted RBP26.72■■□□□ 1.87
PBX1-218ENST00000560469 CACNA1SQ13698 1873 aa26.72■■□□□ 1.87
PBX1-218ENST00000560469 LTBP1Q14766 1721 aa26.72■■□□□ 1.87
PBX1-218ENST00000560469 CHAF1AQ13111 956 aaPredicted RBP26.72■■□□□ 1.87
PBX1-218ENST00000560469 NAA16Q6N069 864 aaPredicted RBP26.72■■□□□ 1.87
PBX1-218ENST00000560469 DEFB132Q7Z7B7 95 aa26.72■■□□□ 1.87
PBX1-218ENST00000560469 TBC1D16Q8TBP0 767 aa26.72■■□□□ 1.87
PBX1-218ENST00000560469 WDR66Q8TBY9 1149 aa26.72■■□□□ 1.87
PBX1-218ENST00000560469 A0A0G2JLW4 131 aa26.71■■□□□ 1.87
PBX1-218ENST00000560469 COL9A3Q14050 684 aaPredicted RBP26.71■■□□□ 1.87
PBX1-218ENST00000560469 TOB2Q14106 344 aaPredicted RBP26.71■■□□□ 1.87
PBX1-218ENST00000560469 MAST2Q6P0Q8 1798 aa26.7■■□□□ 1.87
PBX1-218ENST00000560469 TCEANC2Q96MN5 208 aa26.7■■□□□ 1.87
PBX1-218ENST00000560469 LARP6Q9BRS8 491 aaKnown RBP26.7■■□□□ 1.87
PBX1-218ENST00000560469 NACAP1Q9BZK3 213 aa26.7■■□□□ 1.87
PBX1-218ENST00000560469 MAGEB6P1A0A0J9YX57 407 aa26.7■■□□□ 1.86
PBX1-218ENST00000560469 EXOSC10Q01780 885 aaKnown RBP26.7■■□□□ 1.86
PBX1-218ENST00000560469 CCDC125Q86Z20 511 aa26.7■■□□□ 1.86
PBX1-218ENST00000560469 IFNL3Q8IZI9 196 aa26.7■■□□□ 1.86
PBX1-218ENST00000560469 LCORLQ8N3X6 602 aa26.7■■□□□ 1.86
PBX1-218ENST00000560469 NSUN4Q96CB9 384 aaKnown RBP26.7■■□□□ 1.86
PBX1-218ENST00000560469 TMX4Q9H1E5 349 aaPredicted RBP26.7■■□□□ 1.86
PBX1-218ENST00000560469 POLLQ9UGP5 575 aa26.7■■□□□ 1.86
PBX1-218ENST00000560469 TPCN1Q9ULQ1 816 aa26.7■■□□□ 1.86
PBX1-218ENST00000560469 HAND2P61296 217 aa26.69■■□□□ 1.86
PBX1-218ENST00000560469 ME3Q16798 604 aa26.69■■□□□ 1.86
PBX1-218ENST00000560469 STYK1Q6J9G0 422 aa26.69■■□□□ 1.86
PBX1-218ENST00000560469 Q6ZUG5 572 aa26.69■■□□□ 1.86
PBX1-218ENST00000560469 C2CD5Q86YS7 1000 aa26.69■■□□□ 1.86
PBX1-218ENST00000560469 TNPO1Q92973 898 aaKnown RBP26.69■■□□□ 1.86
PBX1-218ENST00000560469 SLC4A4Q9Y6R1 1079 aa26.69■■□□□ 1.86
PBX1-218ENST00000560469 CCDC88AQ3V6T2 1871 aa26.68■■□□□ 1.86
PBX1-218ENST00000560469 DUOX1Q9NRD9 1551 aa26.68■■□□□ 1.86
PBX1-218ENST00000560469 GSG1L2A8MUP6 293 aa26.68■■□□□ 1.86
PBX1-218ENST00000560469 H0YIN7 160 aa26.68■■□□□ 1.86
PBX1-218ENST00000560469 LARGE1O95461 756 aa26.68■■□□□ 1.86
PBX1-218ENST00000560469 MIGA1Q8NAN2 632 aa26.68■■□□□ 1.86
PBX1-218ENST00000560469 NAPBQ9H115 298 aa26.68■■□□□ 1.86
PBX1-218ENST00000560469 CD209Q9NNX6 404 aa26.68■■□□□ 1.86
PBX1-218ENST00000560469 C6orf229H3BNL8 230 aa26.67■■□□□ 1.86
PBX1-218ENST00000560469 IL1R1P14778 569 aa26.67■■□□□ 1.86
PBX1-218ENST00000560469 MECOMQ03112 1051 aa26.67■■□□□ 1.86
PBX1-218ENST00000560469 ADGRA1Q86SQ6 560 aa26.67■■□□□ 1.86
PBX1-218ENST00000560469 NCOA7Q8NI08 942 aa26.67■■□□□ 1.86
PBX1-218ENST00000560469 GPR101Q96P66 508 aaPredicted RBP26.67■■□□□ 1.86
PBX1-218ENST00000560469 FGD1P98174 961 aa26.66■■□□□ 1.86
PBX1-218ENST00000560469 RIOK1Q9BRS2 568 aaKnown RBP26.66■■□□□ 1.86
PBX1-218ENST00000560469 EPB41L4AQ9HCS5 686 aaPredicted RBP26.66■■□□□ 1.86
PBX1-218ENST00000560469 CCDC83Q8IWF9 413 aa26.66■■□□□ 1.86
PBX1-218ENST00000560469 FBXL16Q8N461 479 aa26.66■■□□□ 1.86
PBX1-218ENST00000560469 MPNDQ8N594 471 aa26.66■■□□□ 1.86
PBX1-218ENST00000560469 ZNF622Q969S3 477 aaKnown RBP eCLIP26.66■■□□□ 1.86
PBX1-218ENST00000560469 GBP4Q96PP9 640 aa26.66■■□□□ 1.86
PBX1-218ENST00000560469 AGXT2Q9BYV1 514 aa26.66■■□□□ 1.86
PBX1-218ENST00000560469 PRDX5P30044 214 aa26.65■■□□□ 1.86
PBX1-218ENST00000560469 TRDNQ13061 729 aa26.65■■□□□ 1.86
PBX1-218ENST00000560469 RALYLQ86SE5 291 aaKnown RBP26.65■■□□□ 1.86
PBX1-218ENST00000560469 ZNF384Q8TF68 577 aa26.65■■□□□ 1.86
PBX1-218ENST00000560469 SLC16A10Q8TF71 515 aa26.65■■□□□ 1.86
PBX1-218ENST00000560469 WDR19Q8NEZ3 1342 aa26.65■■□□□ 1.86
PBX1-218ENST00000560469 KIAA1551Q9HCM1 1747 aa26.65■■□□□ 1.86
PBX1-218ENST00000560469 SMC3Q9UQE7 1217 aa26.64■■□□□ 1.86
PBX1-218ENST00000560469 PRKAB2O43741 272 aa26.63■■□□□ 1.85
PBX1-218ENST00000560469 LDHBP07195 334 aaKnown RBP26.63■■□□□ 1.85
PBX1-218ENST00000560469 MCM4P33991 863 aa26.63■■□□□ 1.85
PBX1-218ENST00000560469 MCM5P33992 734 aa26.63■■□□□ 1.85
PBX1-218ENST00000560469 TDO2P48775 406 aa26.63■■□□□ 1.85
PBX1-218ENST00000560469 DZIP1Q86YF9 867 aaKnown RBP26.63■■□□□ 1.85
PBX1-218ENST00000560469 DPP8Q6V1X1 898 aaPredicted RBP26.63■■□□□ 1.85
PBX1-218ENST00000560469 CLEC17AQ6ZS10 378 aa26.63■■□□□ 1.85
PBX1-218ENST00000560469 MB21D2Q8IYB1 491 aaPredicted RBP26.63■■□□□ 1.85
PBX1-218ENST00000560469 BRF1Q92994 677 aa26.63■■□□□ 1.85
PBX1-218ENST00000560469 NBPF3Q9H094 633 aa26.63■■□□□ 1.85
PBX1-218ENST00000560469 GSTO1P78417 241 aa26.62■■□□□ 1.85
PBX1-218ENST00000560469 CNKSR1Q969H4 720 aa26.62■■□□□ 1.85
PBX1-218ENST00000560469 GIMAP6Q6P9H5 292 aa26.61■■□□□ 1.85
PBX1-218ENST00000560469 TBC1D10CQ8IV04 446 aa26.61■■□□□ 1.85
PBX1-218ENST00000560469 COA1Q9GZY4 146 aa26.61■■□□□ 1.85
PBX1-218ENST00000560469 JAG2Q9Y219 1238 aa26.61■■□□□ 1.85
PBX1-218ENST00000560469 TIAM2Q8IVF5 1701 aa26.61■■□□□ 1.85
PBX1-218ENST00000560469 ST3GAL1Q11201 340 aa26.6■■□□□ 1.85
PBX1-218ENST00000560469 NECAB1Q8N987 351 aa26.6■■□□□ 1.85
PBX1-218ENST00000560469 TBC1D22AQ8WUA7 517 aa26.6■■□□□ 1.85
PBX1-218ENST00000560469 LRRC2Q9BYS8 371 aa26.6■■□□□ 1.85
PBX1-218ENST00000560469 ZC3H12CQ9C0D7 883 aaKnown RBP26.6■■□□□ 1.85
PBX1-218ENST00000560469 DYNLL1P63167 89 aaKnown RBP26.6■■□□□ 1.85
PBX1-218ENST00000560469 PKP1Q13835 747 aa26.6■■□□□ 1.85
PBX1-218ENST00000560469 EYA3Q99504 573 aa26.6■■□□□ 1.85
PBX1-218ENST00000560469 PRC1O43663 620 aa26.59■■□□□ 1.85
PBX1-218ENST00000560469 BRD1O95696 1058 aa26.59■■□□□ 1.85
PBX1-218ENST00000560469 CNNM2Q9H8M5 875 aa26.59■■□□□ 1.85
PBX1-218ENST00000560469 ZDHHC9Q9Y397 364 aa26.59■■□□□ 1.85
PBX1-218ENST00000560469 FAM205AQ6ZU69 1335 aa26.58■■□□□ 1.85
PBX1-218ENST00000560469 DDX11L8A8MPP1 907 aa26.58■■□□□ 1.85
PBX1-218ENST00000560469 LDHCP07864 332 aa26.58■■□□□ 1.85
PBX1-218ENST00000560469 GTF3C6Q969F1 213 aa26.58■■□□□ 1.85
PBX1-218ENST00000560469 CHMP4CQ96CF2 233 aa26.58■■□□□ 1.85
PBX1-218ENST00000560469 CRNKL1Q9BZJ0 848 aaKnown RBP26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms