RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 LGR6Q9HBX8 967 aa15.24■□□□□ 0.03
TRAF3-208ENST00000560371 GIGYF2Q6Y7W6 1299 aaKnown RBP15.24■□□□□ 0.03
TRAF3-208ENST00000560371 NIM1KQ8IY84 436 aa15.24■□□□□ 0.03
TRAF3-208ENST00000560371 TSNARE1Q96NA8 513 aa15.24■□□□□ 0.03
TRAF3-208ENST00000560371 ARID5AQ03989 594 aa15.24■□□□□ 0.03
TRAF3-208ENST00000560371 APBB1IPQ7Z5R6 666 aaPredicted RBP15.24■□□□□ 0.03
TRAF3-208ENST00000560371 CCDC24Q8N4L8 307 aa15.24■□□□□ 0.03
TRAF3-208ENST00000560371 INCENPQ9NQS7 918 aa15.24■□□□□ 0.03
TRAF3-208ENST00000560371 AATFQ9NY61 560 aaKnown RBP eCLIP15.24■□□□□ 0.03
TRAF3-208ENST00000560371 DNM1Q05193 864 aaKnown RBP15.24■□□□□ 0.03
TRAF3-208ENST00000560371 SNW1Q13573 536 aaKnown RBP15.24■□□□□ 0.03
TRAF3-208ENST00000560371 RUFY3Q7L099 469 aa15.24■□□□□ 0.03
TRAF3-208ENST00000560371 BICDL2A1A5D9 508 aa15.23■□□□□ 0.03
TRAF3-208ENST00000560371 H7C1D1 291 aa15.23■□□□□ 0.03
TRAF3-208ENST00000560371 GRIPAP1Q4V328 841 aa15.23■□□□□ 0.03
TRAF3-208ENST00000560371 FCHSD1Q86WN1 690 aa15.23■□□□□ 0.03
TRAF3-208ENST00000560371 ZNF594Q96JF6 807 aaPredicted RBP15.23■□□□□ 0.03
TRAF3-208ENST00000560371 TCOF1Q13428 1488 aaKnown RBP15.23■□□□□ 0.03
TRAF3-208ENST00000560371 ZYXQ15942 572 aaKnown RBP15.23■□□□□ 0.03
TRAF3-208ENST00000560371 AKNAD1Q5T1N1 836 aa15.23■□□□□ 0.03
TRAF3-208ENST00000560371 DNAJC10Q8IXB1 793 aa15.23■□□□□ 0.03
TRAF3-208ENST00000560371 SELENOOQ9BVL4 669 aa15.23■□□□□ 0.03
TRAF3-208ENST00000560371 RGS22Q8NE09 1264 aa15.23■□□□□ 0.03
TRAF3-208ENST00000560371 ZBTB40Q9NUA8 1239 aa15.23■□□□□ 0.03
TRAF3-208ENST00000560371 TAF5LO75529 589 aa15.23■□□□□ 0.03
TRAF3-208ENST00000560371 ANO6Q4KMQ2 910 aa15.23■□□□□ 0.03
TRAF3-208ENST00000560371 XAGE2Q96GT9 111 aa15.23■□□□□ 0.03
TRAF3-208ENST00000560371 AK2P54819 239 aa15.22■□□□□ 0.03
TRAF3-208ENST00000560371 PTGS1P23219 599 aa15.22■□□□□ 0.03
TRAF3-208ENST00000560371 TCP10Q12799 353 aa15.22■□□□□ 0.03
TRAF3-208ENST00000560371 BRAPQ7Z569 592 aa15.22■□□□□ 0.03
TRAF3-208ENST00000560371 LPIN2Q92539 896 aa15.22■□□□□ 0.03
TRAF3-208ENST00000560371 DACT1Q9NYF0 836 aa15.22■□□□□ 0.03
TRAF3-208ENST00000560371 NOP56O00567 594 aaKnown RBP15.22■□□□□ 0.03
TRAF3-208ENST00000560371 GNG11P61952 73 aa15.22■□□□□ 0.03
TRAF3-208ENST00000560371 LETM2Q2VYF4 491 aa15.22■□□□□ 0.03
TRAF3-208ENST00000560371 G2E3Q7L622 706 aa15.22■□□□□ 0.03
TRAF3-208ENST00000560371 B4E1Z4 1266 aa15.22■□□□□ 0.03
TRAF3-208ENST00000560371 TNNI3KQ59H18 835 aa15.22■□□□□ 0.03
TRAF3-208ENST00000560371 BBXQ8WY36 941 aaPredicted RBP15.22■□□□□ 0.03
TRAF3-208ENST00000560371 FPGT-TNNI3KV9GXZ4 949 aa15.22■□□□□ 0.03
TRAF3-208ENST00000560371 PRPHP41219 470 aa15.22■□□□□ 0.03
TRAF3-208ENST00000560371 USP48Q86UV5 1035 aa15.22■□□□□ 0.03
TRAF3-208ENST00000560371 RTL1A6NKG5 1358 aa15.22■□□□□ 0.03
TRAF3-208ENST00000560371 SHTN1A0MZ66 631 aa15.22■□□□□ 0.03
TRAF3-208ENST00000560371 SMC1AQ14683 1233 aaKnown RBP15.22■□□□□ 0.03
TRAF3-208ENST00000560371 KLHL40Q2TBA0 621 aa15.22■□□□□ 0.03
TRAF3-208ENST00000560371 APPBP2Q92624 585 aa15.22■□□□□ 0.03
TRAF3-208ENST00000560371 CCDC65Q8IXS2 484 aa15.21■□□□□ 0.03
TRAF3-208ENST00000560371 IQUBQ8NA54 791 aa15.21■□□□□ 0.03
TRAF3-208ENST00000560371 IL13P35225 146 aa15.21■□□□□ 0.03
TRAF3-208ENST00000560371 PLEKHM2Q8IWE5 1019 aa15.21■□□□□ 0.03
TRAF3-208ENST00000560371 GTPBP4Q9BZE4 634 aaKnown RBP15.21■□□□□ 0.03
TRAF3-208ENST00000560371 PKD2L1Q9P0L9 805 aa15.21■□□□□ 0.03
TRAF3-208ENST00000560371 RAD50Q92878 1312 aa15.21■□□□□ 0.03
TRAF3-208ENST00000560371 PTPDC1A2A3K4 754 aa15.21■□□□□ 0.03
TRAF3-208ENST00000560371 GPR162Q16538 588 aa15.21■□□□□ 0.03
TRAF3-208ENST00000560371 MSANTD4Q8NCY6 345 aa15.21■□□□□ 0.03
TRAF3-208ENST00000560371 MAPKBP1O60336 1514 aa15.21■□□□□ 0.03
TRAF3-208ENST00000560371 DDX12PQ92771 950 aa15.21■□□□□ 0.03
TRAF3-208ENST00000560371 CHMLP26374 656 aa15.21■□□□□ 0.03
TRAF3-208ENST00000560371 ARMT1Q9H993 441 aa15.21■□□□□ 0.03
TRAF3-208ENST00000560371 ERVV-2B6SEH9 535 aa15.21■□□□□ 0.02
TRAF3-208ENST00000560371 F13A1P00488 732 aa15.21■□□□□ 0.02
TRAF3-208ENST00000560371 TBC1D22AQ8WUA7 517 aa15.21■□□□□ 0.02
TRAF3-208ENST00000560371 NAP1L4Q99733 375 aaKnown RBP15.21■□□□□ 0.02
TRAF3-208ENST00000560371 GPAA1O43292 621 aa15.2■□□□□ 0.02
TRAF3-208ENST00000560371 PPIP5K2O43314 1243 aa15.2■□□□□ 0.02
TRAF3-208ENST00000560371 RLBP1P12271 317 aa15.2■□□□□ 0.02
TRAF3-208ENST00000560371 SLC1A4P43007 532 aa15.2■□□□□ 0.02
TRAF3-208ENST00000560371 FRMD4BQ9Y2L6 1034 aa15.2■□□□□ 0.02
TRAF3-208ENST00000560371 TMEM87BQ96K49 555 aa15.2■□□□□ 0.02
TRAF3-208ENST00000560371 GLT8D2Q9H1C3 349 aa15.2■□□□□ 0.02
TRAF3-208ENST00000560371 FLAD1Q8NFF5 587 aa15.2■□□□□ 0.02
TRAF3-208ENST00000560371 ZFYVE16Q7Z3T8 1539 aa15.2■□□□□ 0.02
TRAF3-208ENST00000560371 MROH5Q6ZUA9 1318 aa15.2■□□□□ 0.02
TRAF3-208ENST00000560371 RPL13P26373 211 aaKnown RBP15.2■□□□□ 0.02
TRAF3-208ENST00000560371 CEP170Q5SW79 1584 aa15.2■□□□□ 0.02
TRAF3-208ENST00000560371 VWA3AA6NCI4 1184 aa15.2■□□□□ 0.02
TRAF3-208ENST00000560371 EEF2P13639 858 aaKnown RBP15.2■□□□□ 0.02
TRAF3-208ENST00000560371 SMTNP53814 917 aa15.2■□□□□ 0.02
TRAF3-208ENST00000560371 PRKG1Q13976 671 aa15.2■□□□□ 0.02
TRAF3-208ENST00000560371 DLGAP5Q15398 846 aa15.19■□□□□ 0.02
TRAF3-208ENST00000560371 UVSSAQ2YD98 709 aa15.19■□□□□ 0.02
TRAF3-208ENST00000560371 NEK11Q8NG66 645 aa15.19■□□□□ 0.02
TRAF3-208ENST00000560371 DPY19L2Q6NUT2 758 aa15.19■□□□□ 0.02
TRAF3-208ENST00000560371 PPP1R14CQ8TAE6 165 aa15.19■□□□□ 0.02
TRAF3-208ENST00000560371 KLHDC4Q8TBB5 520 aa15.19■□□□□ 0.02
TRAF3-208ENST00000560371 PLIN2Q99541 437 aa15.19■□□□□ 0.02
TRAF3-208ENST00000560371 ANGEL1Q9UNK9 670 aaKnown RBP15.19■□□□□ 0.02
TRAF3-208ENST00000560371 GINS2Q9Y248 185 aa15.19■□□□□ 0.02
TRAF3-208ENST00000560371 PLXNC1O60486 1568 aa15.19■□□□□ 0.02
TRAF3-208ENST00000560371 POTEB2H3BUK9 544 aa15.19■□□□□ 0.02
TRAF3-208ENST00000560371 MRPS9P82933 396 aaKnown RBP15.19■□□□□ 0.02
TRAF3-208ENST00000560371 CPXCR1Q8N123 301 aa15.19■□□□□ 0.02
TRAF3-208ENST00000560371 ZSCAN23Q3MJ62 389 aa15.19■□□□□ 0.02
TRAF3-208ENST00000560371 EAPPQ56P03 285 aaPredicted RBP15.19■□□□□ 0.02
TRAF3-208ENST00000560371 ZNF496Q96IT1 587 aaPredicted RBP15.19■□□□□ 0.02
TRAF3-208ENST00000560371 DBNDD2Q9BQY9 259 aa15.19■□□□□ 0.02
TRAF3-208ENST00000560371 CCNT1O60563 726 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms