RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 MFSD14BQ5SR56 506 aa21.18■□□□□ 0.98
HERC1-207ENST00000560316 LINS1Q8NG48 757 aa21.18■□□□□ 0.98
HERC1-207ENST00000560316 DNAAF4Q8WXU2 420 aa21.18■□□□□ 0.98
HERC1-207ENST00000560316 TTF2Q9UNY4 1162 aaKnown RBP21.18■□□□□ 0.98
HERC1-207ENST00000560316 ZSWIM8A7E2V4 1837 aa21.18■□□□□ 0.98
HERC1-207ENST00000560316 FKBP5Q13451 457 aaPredicted RBP21.17■□□□□ 0.98
HERC1-207ENST00000560316 CHRDL2Q6WN34 429 aa21.17■□□□□ 0.98
HERC1-207ENST00000560316 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.17■□□□□ 0.98
HERC1-207ENST00000560316 ZNF594Q96JF6 807 aaPredicted RBP21.17■□□□□ 0.98
HERC1-207ENST00000560316 SERPINA10Q9UK55 444 aa21.17■□□□□ 0.98
HERC1-207ENST00000560316 FAM205AQ6ZU69 1335 aa21.16■□□□□ 0.98
HERC1-207ENST00000560316 ECM2O94769 699 aaPredicted RBP21.16■□□□□ 0.98
HERC1-207ENST00000560316 DZIP1LQ8IYY4 767 aaKnown RBP21.16■□□□□ 0.98
HERC1-207ENST00000560316 CSADQ9Y600 493 aa21.16■□□□□ 0.98
HERC1-207ENST00000560316 TLR2O60603 784 aa21.14■□□□□ 0.97
HERC1-207ENST00000560316 GYG1P46976 350 aa21.14■□□□□ 0.97
HERC1-207ENST00000560316 LACTBP83111 547 aaPredicted RBP21.14■□□□□ 0.97
HERC1-207ENST00000560316 KIF22Q14807 665 aa21.14■□□□□ 0.97
HERC1-207ENST00000560316 LMBR1LQ6UX01 489 aa21.14■□□□□ 0.97
HERC1-207ENST00000560316 LDHAL6AQ6ZMR3 332 aa21.14■□□□□ 0.97
HERC1-207ENST00000560316 TDRD7Q8NHU6 1098 aaKnown RBP21.14■□□□□ 0.97
HERC1-207ENST00000560316 BTBD19C9JJ37 291 aa21.13■□□□□ 0.97
HERC1-207ENST00000560316 CRKP46108 304 aa21.13■□□□□ 0.97
HERC1-207ENST00000560316 TNNI2P48788 182 aa21.13■□□□□ 0.97
HERC1-207ENST00000560316 MTFR1Q15390 333 aa21.13■□□□□ 0.97
HERC1-207ENST00000560316 TAF7LQ5H9L4 462 aa21.13■□□□□ 0.97
HERC1-207ENST00000560316 EPHA10Q5JZY3 1008 aa21.13■□□□□ 0.97
HERC1-207ENST00000560316 CNNM1Q9NRU3 951 aa21.13■□□□□ 0.97
HERC1-207ENST00000560316 RBM27Q9P2N5 1060 aaKnown RBP21.13■□□□□ 0.97
HERC1-207ENST00000560316 SNCAIPQ9Y6H5 919 aa21.13■□□□□ 0.97
HERC1-207ENST00000560316 SPDYE5A6NIY4 337 aa21.12■□□□□ 0.97
HERC1-207ENST00000560316 WDHD1O75717 1129 aaPredicted RBP21.12■□□□□ 0.97
HERC1-207ENST00000560316 CETPP11597 493 aa21.12■□□□□ 0.97
HERC1-207ENST00000560316 CACNB3P54284 484 aa21.12■□□□□ 0.97
HERC1-207ENST00000560316 GRIK5Q16478 980 aa21.12■□□□□ 0.97
HERC1-207ENST00000560316 DPF3Q92784 378 aa21.12■□□□□ 0.97
HERC1-207ENST00000560316 SHISA4Q96DD7 197 aa21.12■□□□□ 0.97
HERC1-207ENST00000560316 PRKRIP1Q9H875 184 aaPredicted RBP21.12■□□□□ 0.97
HERC1-207ENST00000560316 ARAP2Q8WZ64 1704 aa21.12■□□□□ 0.97
HERC1-207ENST00000560316 HIBADHP31937 336 aaKnown RBP21.11■□□□□ 0.97
HERC1-207ENST00000560316 CCDC57Q2TAC2 916 aa21.11■□□□□ 0.97
HERC1-207ENST00000560316 F6X3S4 739 aa21.1■□□□□ 0.97
HERC1-207ENST00000560316 IRF6O14896 467 aa21.1■□□□□ 0.97
HERC1-207ENST00000560316 ZKSCAN4Q969J2 545 aaPredicted RBP21.1■□□□□ 0.97
HERC1-207ENST00000560316 FAM84BQ96KN1 310 aaPredicted RBP21.1■□□□□ 0.97
HERC1-207ENST00000560316 RANBP2P49792 3224 aaKnown RBP21.09■□□□□ 0.97
HERC1-207ENST00000560316 GNRH1P01148 92 aa21.09■□□□□ 0.97
HERC1-207ENST00000560316 CTGFP29279 349 aa21.09■□□□□ 0.97
HERC1-207ENST00000560316 ERO1BQ86YB8 467 aa21.09■□□□□ 0.97
HERC1-207ENST00000560316 WRNIP1Q96S55 665 aa21.09■□□□□ 0.97
HERC1-207ENST00000560316 SNAPC2Q13487 334 aa21.08■□□□□ 0.97
HERC1-207ENST00000560316 UBE4AQ14139 1066 aa21.08■□□□□ 0.97
HERC1-207ENST00000560316 BEND3Q5T5X7 828 aa21.08■□□□□ 0.97
HERC1-207ENST00000560316 ZCCHC17Q9NP64 241 aaKnown RBP21.08■□□□□ 0.97
HERC1-207ENST00000560316 CPA4Q9UI42 421 aa21.08■□□□□ 0.97
HERC1-207ENST00000560316 IQSEC3Q9UPP2 1182 aaPredicted RBP21.08■□□□□ 0.97
HERC1-207ENST00000560316 PRMT2P55345 433 aa21.07■□□□□ 0.96
HERC1-207ENST00000560316 WWC1Q8IX03 1113 aa21.07■□□□□ 0.96
HERC1-207ENST00000560316 PUS3Q9BZE2 481 aaKnown RBP21.07■□□□□ 0.96
HERC1-207ENST00000560316 PSMC4P43686 418 aa21.06■□□□□ 0.96
HERC1-207ENST00000560316 CHAF1AQ13111 956 aaPredicted RBP21.06■□□□□ 0.96
HERC1-207ENST00000560316 PPIL2Q13356 520 aa21.06■□□□□ 0.96
HERC1-207ENST00000560316 C17orf99Q6UX52 265 aa21.06■□□□□ 0.96
HERC1-207ENST00000560316 TRIM47Q96LD4 638 aa21.06■□□□□ 0.96
HERC1-207ENST00000560316 SRRDQ9UH36 339 aa21.06■□□□□ 0.96
HERC1-207ENST00000560316 GRM8O00222 908 aa21.04■□□□□ 0.96
HERC1-207ENST00000560316 OSBPP22059 807 aa21.04■□□□□ 0.96
HERC1-207ENST00000560316 GRK4P32298 578 aa21.04■□□□□ 0.96
HERC1-207ENST00000560316 CCDC27Q2M243 656 aa21.04■□□□□ 0.96
HERC1-207ENST00000560316 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.04■□□□□ 0.96
HERC1-207ENST00000560316 RAET1EQ8TD07 263 aa21.04■□□□□ 0.96
HERC1-207ENST00000560316 TEKT1Q969V4 418 aa21.04■□□□□ 0.96
HERC1-207ENST00000560316 RIPOR2Q9Y4F9 1068 aa21.04■□□□□ 0.96
HERC1-207ENST00000560316 VAMP4O75379 141 aa21.03■□□□□ 0.96
HERC1-207ENST00000560316 FMNL1O95466 1100 aaPredicted RBP21.03■□□□□ 0.96
HERC1-207ENST00000560316 CCL5P13501 91 aa21.03■□□□□ 0.96
HERC1-207ENST00000560316 GJA8P48165 433 aa21.03■□□□□ 0.96
HERC1-207ENST00000560316 HDLBPQ00341 1268 aaKnown RBP21.03■□□□□ 0.96
HERC1-207ENST00000560316 MIGA2Q7L4E1 593 aa21.03■□□□□ 0.96
HERC1-207ENST00000560316 UBE2Q1Q7Z7E8 422 aa21.03■□□□□ 0.96
HERC1-207ENST00000560316 VPS37DQ86XT2 251 aa21.03■□□□□ 0.96
HERC1-207ENST00000560316 NKX2-3Q8TAU0 364 aa21.03■□□□□ 0.96
HERC1-207ENST00000560316 FANCIQ9NVI1 1328 aa21.03■□□□□ 0.96
HERC1-207ENST00000560316 PDHXO00330 501 aa21.02■□□□□ 0.96
HERC1-207ENST00000560316 INPP5BP32019 993 aa21.02■□□□□ 0.96
HERC1-207ENST00000560316 FBXO33Q7Z6M2 555 aa21.02■□□□□ 0.96
HERC1-207ENST00000560316 SLC17A8Q8NDX2 589 aa21.02■□□□□ 0.96
HERC1-207ENST00000560316 HTATIP2Q9BUP3 242 aa21.02■□□□□ 0.96
HERC1-207ENST00000560316 RNF208Q9H0X6 261 aa21.02■□□□□ 0.96
HERC1-207ENST00000560316 PRO3102Q9H379 93 aa21.02■□□□□ 0.96
HERC1-207ENST00000560316 TMOD2Q9NZR1 351 aa21.02■□□□□ 0.96
HERC1-207ENST00000560316 MYPNQ86TC9 1320 aa21.02■□□□□ 0.95
HERC1-207ENST00000560316 DLL1O00548 723 aa21.01■□□□□ 0.95
HERC1-207ENST00000560316 FRAT2O75474 233 aaPredicted RBP21.01■□□□□ 0.95
HERC1-207ENST00000560316 GJB1P08034 283 aa21.01■□□□□ 0.95
HERC1-207ENST00000560316 HOXD10P28358 340 aa21.01■□□□□ 0.95
HERC1-207ENST00000560316 PPATQ06203 517 aa21.01■□□□□ 0.95
HERC1-207ENST00000560316 APOBEC3HQ6NTF7 200 aaKnown RBP21.01■□□□□ 0.95
HERC1-207ENST00000560316 ANKRD23Q86SG2 305 aa21.01■□□□□ 0.95
HERC1-207ENST00000560316 FAM83AQ86UY5 434 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms