RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 PRDX5P30044 214 aa20.63■□□□□ 0.89
RPL28-209ENST00000560055 CFAP100Q494V2 611 aa20.63■□□□□ 0.89
RPL28-209ENST00000560055 ZGPATQ8N5A5 531 aaKnown RBP20.63■□□□□ 0.89
RPL28-209ENST00000560055 GGA3Q9NZ52 723 aa20.63■□□□□ 0.89
RPL28-209ENST00000560055 AKAP11Q9UKA4 1901 aa20.63■□□□□ 0.89
RPL28-209ENST00000560055 MAST3O60307 1309 aa20.62■□□□□ 0.89
RPL28-209ENST00000560055 PITPNM2Q9BZ72 1349 aa20.62■□□□□ 0.89
RPL28-209ENST00000560055 SMARCA5O60264 1052 aaPredicted RBP20.62■□□□□ 0.89
RPL28-209ENST00000560055 IFIT2P09913 472 aaKnown RBP20.62■□□□□ 0.89
RPL28-209ENST00000560055 DLGAP5Q15398 846 aa20.62■□□□□ 0.89
RPL28-209ENST00000560055 CRKP46108 304 aa20.61■□□□□ 0.89
RPL28-209ENST00000560055 ANGEL2Q5VTE6 544 aaKnown RBP20.61■□□□□ 0.89
RPL28-209ENST00000560055 PRMT6Q96LA8 375 aaPredicted RBP20.61■□□□□ 0.89
RPL28-209ENST00000560055 GLIS2Q9BZE0 524 aaPredicted RBP20.61■□□□□ 0.89
RPL28-209ENST00000560055 AOX1Q06278 1338 aa20.6■□□□□ 0.89
RPL28-209ENST00000560055 LDHBP07195 334 aaKnown RBP20.6■□□□□ 0.89
RPL28-209ENST00000560055 CDC37L1Q7L3B6 337 aa20.6■□□□□ 0.89
RPL28-209ENST00000560055 TEKT1Q969V4 418 aa20.6■□□□□ 0.89
RPL28-209ENST00000560055 DCPSQ96C86 337 aaKnown RBP20.6■□□□□ 0.89
RPL28-209ENST00000560055 GCC1Q96CN9 775 aa20.6■□□□□ 0.89
RPL28-209ENST00000560055 CREBZFQ9NS37 354 aa20.6■□□□□ 0.89
RPL28-209ENST00000560055 MKRN1Q9UHC7 482 aaKnown RBP20.6■□□□□ 0.89
RPL28-209ENST00000560055 HHIPL2Q6UWX4 724 aa20.59■□□□□ 0.89
RPL28-209ENST00000560055 KRT26Q7Z3Y9 468 aa20.59■□□□□ 0.89
RPL28-209ENST00000560055 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.59■□□□□ 0.89
RPL28-209ENST00000560055 ZDHHC15Q96MV8 337 aa20.59■□□□□ 0.89
RPL28-209ENST00000560055 SNRKQ9NRH2 765 aa20.59■□□□□ 0.89
RPL28-209ENST00000560055 ABCF2Q9UG63 623 aa20.59■□□□□ 0.89
RPL28-209ENST00000560055 POLR2AP24928 1970 aaKnown RBP20.58■□□□□ 0.89
RPL28-209ENST00000560055 TRAF5O00463 557 aa20.58■□□□□ 0.89
RPL28-209ENST00000560055 IGHDP01880 384 aa20.58■□□□□ 0.89
RPL28-209ENST00000560055 CYP2E1P05181 493 aaPredicted RBP20.58■□□□□ 0.89
RPL28-209ENST00000560055 ZAP70P43403 619 aa20.58■□□□□ 0.89
RPL28-209ENST00000560055 IFFO2Q5TF58 517 aa20.58■□□□□ 0.89
RPL28-209ENST00000560055 SPTY2D1Q68D10 685 aaPredicted RBP20.58■□□□□ 0.89
RPL28-209ENST00000560055 TBC1D9Q6ZT07 1266 aa20.58■□□□□ 0.89
RPL28-209ENST00000560055 SMC5Q8IY18 1101 aa20.58■□□□□ 0.89
RPL28-209ENST00000560055 RWDD1Q9H446 243 aaPredicted RBP20.58■□□□□ 0.89
RPL28-209ENST00000560055 ADM5C9JUS6 153 aa20.57■□□□□ 0.88
RPL28-209ENST00000560055 RBM5P52756 815 aaKnown RBP eCLIP20.57■□□□□ 0.88
RPL28-209ENST00000560055 FMR1Q06787 632 aaKnown RBP eCLIP20.57■□□□□ 0.88
RPL28-209ENST00000560055 DIXDC1Q155Q3 683 aa20.57■□□□□ 0.88
RPL28-209ENST00000560055 APOBEC3HQ6NTF7 200 aaKnown RBP20.57■□□□□ 0.88
RPL28-209ENST00000560055 USP48Q86UV5 1035 aa20.57■□□□□ 0.88
RPL28-209ENST00000560055 SULF1Q8IWU6 871 aa20.57■□□□□ 0.88
RPL28-209ENST00000560055 ZNF384Q8TF68 577 aa20.57■□□□□ 0.88
RPL28-209ENST00000560055 SPDYE2Q495Y8 402 aa20.56■□□□□ 0.88
RPL28-209ENST00000560055 DLK2Q6UY11 383 aa20.56■□□□□ 0.88
RPL28-209ENST00000560055 ERICH6Q7L0X2 663 aa20.56■□□□□ 0.88
RPL28-209ENST00000560055 DAGLAQ9Y4D2 1042 aa20.56■□□□□ 0.88
RPL28-209ENST00000560055 GAKO14976 1311 aa20.55■□□□□ 0.88
RPL28-209ENST00000560055 ECM29Q5VYK3 1845 aa20.55■□□□□ 0.88
RPL28-209ENST00000560055 MYO1BO43795 1136 aa20.55■□□□□ 0.88
RPL28-209ENST00000560055 ATP5JP18859 108 aa20.55■□□□□ 0.88
RPL28-209ENST00000560055 MECOMQ03112 1051 aa20.55■□□□□ 0.88
RPL28-209ENST00000560055 DZIP1Q86YF9 867 aaKnown RBP20.55■□□□□ 0.88
RPL28-209ENST00000560055 APOBEC3FQ8IUX4 373 aaKnown RBP20.55■□□□□ 0.88
RPL28-209ENST00000560055 NSUN4Q96CB9 384 aaKnown RBP20.55■□□□□ 0.88
RPL28-209ENST00000560055 FAM163AQ96GL9 167 aaPredicted RBP20.55■□□□□ 0.88
RPL28-209ENST00000560055 BCL11AQ9H165 835 aa20.55■□□□□ 0.88
RPL28-209ENST00000560055 CLRN2A0PK11 232 aa20.54■□□□□ 0.88
RPL28-209ENST00000560055 TMEM88BA6NKF7 163 aa20.54■□□□□ 0.88
RPL28-209ENST00000560055 IGSF3O75054 1194 aa20.54■□□□□ 0.88
RPL28-209ENST00000560055 TDRD3Q9H7E2 651 aaKnown RBP20.54■□□□□ 0.88
RPL28-209ENST00000560055 PIH1D3Q9NQM4 214 aaKnown RBP20.54■□□□□ 0.88
RPL28-209ENST00000560055 SCAF8Q9UPN6 1271 aaKnown RBP20.54■□□□□ 0.88
RPL28-209ENST00000560055 NDUFB9Q9Y6M9 179 aa20.54■□□□□ 0.88
RPL28-209ENST00000560055 HSPA1AP0DMV8 641 aaKnown RBP20.53■□□□□ 0.88
RPL28-209ENST00000560055 HSPA1BP0DMV9 641 aaKnown RBP20.53■□□□□ 0.88
RPL28-209ENST00000560055 CST9Q5W186 159 aa20.53■□□□□ 0.88
RPL28-209ENST00000560055 ANTXR1Q9H6X2 564 aa20.53■□□□□ 0.88
RPL28-209ENST00000560055 LRP2BPQ9P2M1 347 aa20.53■□□□□ 0.88
RPL28-209ENST00000560055 ZNF70Q9UC06 446 aaPredicted RBP20.53■□□□□ 0.88
RPL28-209ENST00000560055 SALL3Q9BXA9 1300 aa20.53■□□□□ 0.88
RPL28-209ENST00000560055 CNTNAP1P78357 1384 aa20.52■□□□□ 0.88
RPL28-209ENST00000560055 COL13A1Q5TAT6 717 aaPredicted RBP20.52■□□□□ 0.88
RPL28-209ENST00000560055 ANKRD45Q5TZF3 282 aa20.52■□□□□ 0.88
RPL28-209ENST00000560055 SLF2Q8IX21 1173 aa20.52■□□□□ 0.88
RPL28-209ENST00000560055 ECHDC1Q9NTX5 307 aa20.52■□□□□ 0.88
RPL28-209ENST00000560055 RAI14Q9P0K7 980 aa20.52■□□□□ 0.88
RPL28-209ENST00000560055 MROH7-TTC4A0A0A0MT08 1334 aa20.52■□□□□ 0.87
RPL28-209ENST00000560055 MYH2Q9UKX2 1941 aa20.51■□□□□ 0.87
RPL28-209ENST00000560055 CENPBP07199 599 aaPredicted RBP20.51■□□□□ 0.87
RPL28-209ENST00000560055 OTUD7AQ8TE49 926 aaPredicted RBP20.51■□□□□ 0.87
RPL28-209ENST00000560055 CDCA5Q96FF9 252 aa20.51■□□□□ 0.87
RPL28-209ENST00000560055 HAUS7Q99871 368 aa20.51■□□□□ 0.87
RPL28-209ENST00000560055 DEFB129Q9H1M3 183 aa20.51■□□□□ 0.87
RPL28-209ENST00000560055 BOLA2Q9H3K6 86 aa20.51■□□□□ 0.87
RPL28-209ENST00000560055 TRPM7Q96QT4 1865 aa20.51■□□□□ 0.87
RPL28-209ENST00000560055 MAST2Q6P0Q8 1798 aa20.5■□□□□ 0.87
RPL28-209ENST00000560055 CELF2O95319 508 aaKnown RBP20.5■□□□□ 0.87
RPL28-209ENST00000560055 GSTO1P78417 241 aa20.5■□□□□ 0.87
RPL28-209ENST00000560055 FKBP1CQ5VVH2 108 aa20.5■□□□□ 0.87
RPL28-209ENST00000560055 CDC42EP5Q6NZY7 148 aa20.5■□□□□ 0.87
RPL28-209ENST00000560055 VEZTQ9HBM0 779 aa20.5■□□□□ 0.87
RPL28-209ENST00000560055 PPP2R3BQ9Y5P8 575 aa20.5■□□□□ 0.87
RPL28-209ENST00000560055 DOCK2Q92608 1830 aa20.49■□□□□ 0.87
RPL28-209ENST00000560055 GPR75-ASB3A0A0A6YYF3 556 aa20.49■□□□□ 0.87
RPL28-209ENST00000560055 VEGFBP49765 207 aa20.49■□□□□ 0.87
RPL28-209ENST00000560055 NUCB1Q02818 461 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms