RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 LMNB1P20700 586 aa13.98□□□□□ -0.17
TM2D3-208ENST00000559891 SCNN1DP51172 638 aa13.98□□□□□ -0.17
TM2D3-208ENST00000559891 USP17L1Q7RTZ2 530 aa13.98□□□□□ -0.17
TM2D3-208ENST00000559891 KIAA0825Q8IV33 1275 aa13.98□□□□□ -0.17
TM2D3-208ENST00000559891 JDP2Q8WYK2 163 aa13.98□□□□□ -0.17
TM2D3-208ENST00000559891 OSBP2Q969R2 916 aa13.98□□□□□ -0.17
TM2D3-208ENST00000559891 PUS7LQ9H0K6 701 aaKnown RBP13.98□□□□□ -0.17
TM2D3-208ENST00000559891 BRPF3Q9ULD4 1205 aa13.98□□□□□ -0.17
TM2D3-208ENST00000559891 ZNF532Q9HCE3 1301 aa13.98□□□□□ -0.17
TM2D3-208ENST00000559891 ADAMTSL1Q8N6G6 1762 aa13.98□□□□□ -0.17
TM2D3-208ENST00000559891 TCRBV5S4A2TA0A5A2 114 aa13.97□□□□□ -0.17
TM2D3-208ENST00000559891 C9orf131Q5VYM1 1079 aa13.97□□□□□ -0.17
TM2D3-208ENST00000559891 ZNF589Q86UQ0 364 aaPredicted RBP13.97□□□□□ -0.17
TM2D3-208ENST00000559891 WDR66Q8TBY9 1149 aa13.97□□□□□ -0.17
TM2D3-208ENST00000559891 NSUN4Q96CB9 384 aaKnown RBP13.97□□□□□ -0.17
TM2D3-208ENST00000559891 M0R2C6 588 aa13.97□□□□□ -0.17
TM2D3-208ENST00000559891 CDC45O75419 566 aa13.97□□□□□ -0.17
TM2D3-208ENST00000559891 ADD2P35612 726 aa13.97□□□□□ -0.17
TM2D3-208ENST00000559891 STRIP1Q5VSL9 837 aa13.97□□□□□ -0.17
TM2D3-208ENST00000559891 MIGA1Q8NAN2 632 aa13.97□□□□□ -0.17
TM2D3-208ENST00000559891 PDS5AQ29RF7 1337 aaKnown RBP13.97□□□□□ -0.17
TM2D3-208ENST00000559891 FZD9O00144 591 aa13.96□□□□□ -0.17
TM2D3-208ENST00000559891 RNF113AO15541 343 aaKnown RBP13.96□□□□□ -0.17
TM2D3-208ENST00000559891 TTF1Q15361 905 aaPredicted RBP13.96□□□□□ -0.17
TM2D3-208ENST00000559891 CNKSR2Q8WXI2 1034 aa13.96□□□□□ -0.17
TM2D3-208ENST00000559891 VPS33BQ9H267 617 aa13.96□□□□□ -0.17
TM2D3-208ENST00000559891 RTN4Q9NQC3 1192 aaKnown RBP13.96□□□□□ -0.17
TM2D3-208ENST00000559891 MYH7P12883 1935 aa13.96□□□□□ -0.17
TM2D3-208ENST00000559891 SALL1Q9NSC2 1324 aa13.96□□□□□ -0.17
TM2D3-208ENST00000559891 LDHBP07195 334 aaKnown RBP13.96□□□□□ -0.18
TM2D3-208ENST00000559891 DIAPH3Q9NSV4 1193 aa13.96□□□□□ -0.18
TM2D3-208ENST00000559891 TTF2Q9UNY4 1162 aaKnown RBP13.96□□□□□ -0.18
TM2D3-208ENST00000559891 GJA3Q9Y6H8 435 aa13.96□□□□□ -0.18
TM2D3-208ENST00000559891 VIL1P09327 827 aaKnown RBP13.95□□□□□ -0.18
TM2D3-208ENST00000559891 DYNLL1P63167 89 aaKnown RBP13.95□□□□□ -0.18
TM2D3-208ENST00000559891 MAP3K12Q12852 859 aa13.95□□□□□ -0.18
TM2D3-208ENST00000559891 TBC1D32Q96NH3 1257 aa13.95□□□□□ -0.18
TM2D3-208ENST00000559891 UPF2Q9HAU5 1272 aaKnown RBP13.95□□□□□ -0.18
TM2D3-208ENST00000559891 PSME4Q14997 1843 aa13.95□□□□□ -0.18
TM2D3-208ENST00000559891 DICER1Q9UPY3 1922 aaKnown RBP13.94□□□□□ -0.18
TM2D3-208ENST00000559891 CYP7A1P22680 504 aa13.94□□□□□ -0.18
TM2D3-208ENST00000559891 ZMYM1Q5SVZ6 1142 aa13.94□□□□□ -0.18
TM2D3-208ENST00000559891 VPS53Q5VIR6 699 aa13.94□□□□□ -0.18
TM2D3-208ENST00000559891 CIAPIN1Q6FI81 312 aa13.94□□□□□ -0.18
TM2D3-208ENST00000559891 ESYT1Q9BSJ8 1104 aa13.94□□□□□ -0.18
TM2D3-208ENST00000559891 MAST3O60307 1309 aa13.94□□□□□ -0.18
TM2D3-208ENST00000559891 EGFRP00533 1210 aa13.94□□□□□ -0.18
TM2D3-208ENST00000559891 NAA16Q6N069 864 aaPredicted RBP13.94□□□□□ -0.18
TM2D3-208ENST00000559891 RSBN1LQ6PCB5 846 aaPredicted RBP13.94□□□□□ -0.18
TM2D3-208ENST00000559891 DZIP1Q86YF9 867 aaKnown RBP13.94□□□□□ -0.18
TM2D3-208ENST00000559891 GMLQ99445 158 aa13.94□□□□□ -0.18
TM2D3-208ENST00000559891 DDNO94850 711 aaPredicted RBP13.93□□□□□ -0.18
TM2D3-208ENST00000559891 TBC1D22AQ8WUA7 517 aa13.93□□□□□ -0.18
TM2D3-208ENST00000559891 ARMT1Q9H993 441 aa13.93□□□□□ -0.18
TM2D3-208ENST00000559891 AATFQ9NY61 560 aaKnown RBP eCLIP13.93□□□□□ -0.18
TM2D3-208ENST00000559891 MYH2Q9UKX2 1941 aa13.93□□□□□ -0.18
TM2D3-208ENST00000559891 FOXP2O15409 715 aa13.93□□□□□ -0.18
TM2D3-208ENST00000559891 PRKAB2O43741 272 aa13.93□□□□□ -0.18
TM2D3-208ENST00000559891 GRIN3BO60391 1043 aa13.93□□□□□ -0.18
TM2D3-208ENST00000559891 MFAP1P55081 439 aaKnown RBP13.93□□□□□ -0.18
TM2D3-208ENST00000559891 LCORLQ8N3X6 602 aa13.93□□□□□ -0.18
TM2D3-208ENST00000559891 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.93□□□□□ -0.18
TM2D3-208ENST00000559891 TIAM2Q8IVF5 1701 aa13.93□□□□□ -0.18
TM2D3-208ENST00000559891 SGSM2O43147 1006 aa13.92□□□□□ -0.18
TM2D3-208ENST00000559891 GMPSP49915 693 aaPredicted RBP13.92□□□□□ -0.18
TM2D3-208ENST00000559891 PTH1RQ03431 593 aa13.92□□□□□ -0.18
TM2D3-208ENST00000559891 UBE3CQ15386 1083 aa13.92□□□□□ -0.18
TM2D3-208ENST00000559891 APPBP2Q92624 585 aa13.92□□□□□ -0.18
TM2D3-208ENST00000559891 MBD4O95243 580 aa13.91□□□□□ -0.18
TM2D3-208ENST00000559891 EIF6P56537 245 aaKnown RBP13.91□□□□□ -0.18
TM2D3-208ENST00000559891 ZGPATQ8N5A5 531 aaKnown RBP13.91□□□□□ -0.18
TM2D3-208ENST00000559891 DAGLAQ9Y4D2 1042 aa13.91□□□□□ -0.18
TM2D3-208ENST00000559891 MCMDC2Q4G0Z9 681 aa13.91□□□□□ -0.18
TM2D3-208ENST00000559891 SPTY2D1Q68D10 685 aaPredicted RBP13.91□□□□□ -0.18
TM2D3-208ENST00000559891 RIOK1Q9BRS2 568 aaKnown RBP13.91□□□□□ -0.18
TM2D3-208ENST00000559891 SCAF8Q9UPN6 1271 aaKnown RBP13.91□□□□□ -0.18
TM2D3-208ENST00000559891 SMIM22K7EJ46 135 aa13.9□□□□□ -0.18
TM2D3-208ENST00000559891 GPAA1O43292 621 aa13.9□□□□□ -0.18
TM2D3-208ENST00000559891 ZFYP08048 801 aaPredicted RBP13.9□□□□□ -0.18
TM2D3-208ENST00000559891 CRKP46108 304 aa13.9□□□□□ -0.18
TM2D3-208ENST00000559891 RBM5P52756 815 aaKnown RBP eCLIP13.9□□□□□ -0.18
TM2D3-208ENST00000559891 CACNB3P54284 484 aa13.9□□□□□ -0.18
TM2D3-208ENST00000559891 EVX2Q03828 476 aa13.9□□□□□ -0.18
TM2D3-208ENST00000559891 RBM26Q5T8P6 1007 aaKnown RBP13.9□□□□□ -0.18
TM2D3-208ENST00000559891 SAMD7Q7Z3H4 446 aa13.9□□□□□ -0.18
TM2D3-208ENST00000559891 SH3RF3Q8TEJ3 882 aaPredicted RBP13.9□□□□□ -0.18
TM2D3-208ENST00000559891 SDR42E1Q8WUS8 393 aa13.9□□□□□ -0.18
TM2D3-208ENST00000559891 RFX7Q2KHR2 1363 aa13.89□□□□□ -0.19
TM2D3-208ENST00000559891 MROH7-TTC4A0A0A0MT08 1334 aa13.89□□□□□ -0.19
TM2D3-208ENST00000559891 BTDP43251 543 aa13.89□□□□□ -0.19
TM2D3-208ENST00000559891 FKBP1AP62942 108 aaKnown RBP13.89□□□□□ -0.19
TM2D3-208ENST00000559891 TNIP1Q15025 636 aa13.89□□□□□ -0.19
TM2D3-208ENST00000559891 ZSCAN25Q6NSZ9 544 aa13.89□□□□□ -0.19
TM2D3-208ENST00000559891 APOBEC3HQ6NTF7 200 aaKnown RBP13.89□□□□□ -0.19
TM2D3-208ENST00000559891 PRMT6Q96LA8 375 aaPredicted RBP13.89□□□□□ -0.19
TM2D3-208ENST00000559891 STRBPQ96SI9 672 aaKnown RBP13.89□□□□□ -0.19
TM2D3-208ENST00000559891 LSG1Q9H089 658 aaKnown RBP13.89□□□□□ -0.19
TM2D3-208ENST00000559891 ANO2Q9NQ90 1003 aa13.89□□□□□ -0.19
TM2D3-208ENST00000559891 HELLSQ9NRZ9 838 aa13.89□□□□□ -0.19
TM2D3-208ENST00000559891 MAST2Q6P0Q8 1798 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 813.9 ms