RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 MECOMQ03112 1051 aa14.64□□□□□ -0.07
HERC1-205ENST00000559886 MFSD14BQ5SR56 506 aa14.64□□□□□ -0.07
HERC1-205ENST00000559886 MAP4K1Q92918 833 aa14.64□□□□□ -0.07
HERC1-205ENST00000559886 ZNF277Q9NRM2 450 aaPredicted RBP14.64□□□□□ -0.07
HERC1-205ENST00000559886 MYH2Q9UKX2 1941 aa14.63□□□□□ -0.07
HERC1-205ENST00000559886 CYP7A1P22680 504 aa14.63□□□□□ -0.07
HERC1-205ENST00000559886 TTLL5Q6EMB2 1281 aa14.63□□□□□ -0.07
HERC1-205ENST00000559886 NAA16Q6N069 864 aaPredicted RBP14.63□□□□□ -0.07
HERC1-205ENST00000559886 SYT17Q9BSW7 474 aa14.63□□□□□ -0.07
HERC1-205ENST00000559886 TAOK3Q9H2K8 898 aa14.63□□□□□ -0.07
HERC1-205ENST00000559886 NFKBIEO00221 500 aa14.63□□□□□ -0.07
HERC1-205ENST00000559886 SOCS7O14512 581 aa14.63□□□□□ -0.07
HERC1-205ENST00000559886 GPAA1O43292 621 aa14.63□□□□□ -0.07
HERC1-205ENST00000559886 GRIK5Q16478 980 aa14.62□□□□□ -0.07
HERC1-205ENST00000559886 ADGRA1Q86SQ6 560 aa14.62□□□□□ -0.07
HERC1-205ENST00000559886 SUGT1Q9Y2Z0 365 aa14.62□□□□□ -0.07
HERC1-205ENST00000559886 COL4A5P29400 1685 aa14.62□□□□□ -0.07
HERC1-205ENST00000559886 LTBP3Q9NS15 1303 aa14.62□□□□□ -0.07
HERC1-205ENST00000559886 MCCP23508 829 aa14.61□□□□□ -0.07
HERC1-205ENST00000559886 HSPA4P34932 840 aa14.61□□□□□ -0.07
HERC1-205ENST00000559886 IARSP41252 1262 aaKnown RBP14.61□□□□□ -0.07
HERC1-205ENST00000559886 STRIP1Q5VSL9 837 aa14.61□□□□□ -0.07
HERC1-205ENST00000559886 DZIP1Q86YF9 867 aaKnown RBP14.61□□□□□ -0.07
HERC1-205ENST00000559886 LARGE2Q8N3Y3 721 aa14.61□□□□□ -0.07
HERC1-205ENST00000559886 DSCC1Q9BVC3 393 aa14.61□□□□□ -0.07
HERC1-205ENST00000559886 KCNQ5Q9NR82 932 aa14.61□□□□□ -0.07
HERC1-205ENST00000559886 HSPD1P10809 573 aaKnown RBP14.61□□□□□ -0.07
HERC1-205ENST00000559886 VPS53Q5VIR6 699 aa14.61□□□□□ -0.07
HERC1-205ENST00000559886 AIDAQ96BJ3 306 aa14.61□□□□□ -0.07
HERC1-205ENST00000559886 STRBPQ96SI9 672 aaKnown RBP14.61□□□□□ -0.07
HERC1-205ENST00000559886 SRCAPQ6ZRS2 3230 aa14.61□□□□□ -0.07
HERC1-205ENST00000559886 YDJCA8MPS7 323 aa14.6□□□□□ -0.07
HERC1-205ENST00000559886 FKBP1AP62942 108 aaKnown RBP14.6□□□□□ -0.07
HERC1-205ENST00000559886 NECTIN1Q15223 517 aa14.6□□□□□ -0.07
HERC1-205ENST00000559886 CERS5Q8N5B7 392 aa14.6□□□□□ -0.07
HERC1-205ENST00000559886 FBXW7Q969H0 707 aa14.6□□□□□ -0.07
HERC1-205ENST00000559886 KIF2CQ99661 725 aa14.6□□□□□ -0.07
HERC1-205ENST00000559886 RBM8AQ9Y5S9 174 aaKnown RBP14.6□□□□□ -0.07
HERC1-205ENST00000559886 USP17L3A6NCW0 530 aa14.6□□□□□ -0.07
HERC1-205ENST00000559886 USP17L4A6NCW7 530 aa14.6□□□□□ -0.07
HERC1-205ENST00000559886 MBD4O95243 580 aa14.6□□□□□ -0.07
HERC1-205ENST00000559886 GSTO1P78417 241 aa14.6□□□□□ -0.07
HERC1-205ENST00000559886 USP17L1Q7RTZ2 530 aa14.6□□□□□ -0.07
HERC1-205ENST00000559886 FOXP2O15409 715 aa14.59□□□□□ -0.07
HERC1-205ENST00000559886 ANAPC15P60006 121 aa14.59□□□□□ -0.07
HERC1-205ENST00000559886 DACT2Q5SW24 774 aa14.59□□□□□ -0.07
HERC1-205ENST00000559886 MIGA1Q8NAN2 632 aa14.59□□□□□ -0.07
HERC1-205ENST00000559886 IL17RAQ96F46 866 aa14.59□□□□□ -0.07
HERC1-205ENST00000559886 MAGEB6P1A0A0J9YX57 407 aa14.59□□□□□ -0.07
HERC1-205ENST00000559886 KCNB2Q92953 911 aa14.59□□□□□ -0.07
HERC1-205ENST00000559886 RIOK1Q9BRS2 568 aaKnown RBP14.59□□□□□ -0.07
HERC1-205ENST00000559886 ARMT1Q9H993 441 aa14.59□□□□□ -0.07
HERC1-205ENST00000559886 PALD1Q9ULE6 856 aa14.59□□□□□ -0.07
HERC1-205ENST00000559886 U3KPZ7 1027 aaPredicted RBP14.59□□□□□ -0.07
HERC1-205ENST00000559886 LDHCP07864 332 aa14.58□□□□□ -0.07
HERC1-205ENST00000559886 NIM1KQ8IY84 436 aa14.58□□□□□ -0.07
HERC1-205ENST00000559886 LCORLQ8N3X6 602 aa14.58□□□□□ -0.07
HERC1-205ENST00000559886 MXD3Q9BW11 206 aa14.58□□□□□ -0.07
HERC1-205ENST00000559886 GNAT2P19087 354 aa14.58□□□□□ -0.08
HERC1-205ENST00000559886 ANP32AP39687 249 aaKnown RBP14.58□□□□□ -0.08
HERC1-205ENST00000559886 DIXDC1Q155Q3 683 aa14.58□□□□□ -0.08
HERC1-205ENST00000559886 FAM163AQ96GL9 167 aaPredicted RBP14.58□□□□□ -0.08
HERC1-205ENST00000559886 ZNRF3Q9ULT6 936 aa14.58□□□□□ -0.08
HERC1-205ENST00000559886 CREB3L3Q68CJ9 461 aa14.57□□□□□ -0.08
HERC1-205ENST00000559886 SLF2Q8IX21 1173 aa14.57□□□□□ -0.08
HERC1-205ENST00000559886 DICER1Q9UPY3 1922 aaKnown RBP14.57□□□□□ -0.08
HERC1-205ENST00000559886 SBF1O95248 1867 aa14.57□□□□□ -0.08
HERC1-205ENST00000559886 MROH7-TTC4A0A0A0MT08 1334 aa14.57□□□□□ -0.08
HERC1-205ENST00000559886 PATL2C9JE40 543 aaKnown RBP14.56□□□□□ -0.08
HERC1-205ENST00000559886 SLC27A2O14975 620 aa14.56□□□□□ -0.08
HERC1-205ENST00000559886 DYNLL1P63167 89 aaKnown RBP14.56□□□□□ -0.08
HERC1-205ENST00000559886 RASSF7Q02833 373 aa14.56□□□□□ -0.08
HERC1-205ENST00000559886 RNF20Q5VTR2 975 aa14.56□□□□□ -0.08
HERC1-205ENST00000559886 RASEFQ8IZ41 740 aa14.56□□□□□ -0.08
HERC1-205ENST00000559886 TTF2Q9UNY4 1162 aaKnown RBP14.56□□□□□ -0.08
HERC1-205ENST00000559886 SNX14Q9Y5W7 946 aa14.56□□□□□ -0.08
HERC1-205ENST00000559886 RPAP1Q9BWH6 1393 aaPredicted RBP14.56□□□□□ -0.08
HERC1-205ENST00000559886 GAKO14976 1311 aa14.56□□□□□ -0.08
HERC1-205ENST00000559886 CDK5RAP2Q96SN8 1893 aa14.56□□□□□ -0.08
HERC1-205ENST00000559886 FGAP02671 866 aa14.56□□□□□ -0.08
HERC1-205ENST00000559886 PPP4CP60510 307 aa14.56□□□□□ -0.08
HERC1-205ENST00000559886 ALX1Q15699 326 aa14.56□□□□□ -0.08
HERC1-205ENST00000559886 JDP2Q8WYK2 163 aa14.56□□□□□ -0.08
HERC1-205ENST00000559886 AATFQ9NY61 560 aaKnown RBP eCLIP14.56□□□□□ -0.08
HERC1-205ENST00000559886 CTNNA3Q9UI47 895 aa14.56□□□□□ -0.08
HERC1-205ENST00000559886 LAMA4Q16363 1823 aa14.55□□□□□ -0.08
HERC1-205ENST00000559886 GSG1L2A8MUP6 293 aa14.55□□□□□ -0.08
HERC1-205ENST00000559886 VIL1P09327 827 aaKnown RBP14.55□□□□□ -0.08
HERC1-205ENST00000559886 PRELPP51888 382 aa14.55□□□□□ -0.08
HERC1-205ENST00000559886 SLC4A4Q9Y6R1 1079 aa14.55□□□□□ -0.08
HERC1-205ENST00000559886 ZMYM6O95789 1325 aa14.55□□□□□ -0.08
HERC1-205ENST00000559886 BAZ2AQ9UIF9 1905 aaKnown RBP14.55□□□□□ -0.08
HERC1-205ENST00000559886 GPR75-ASB3A0A0A6YYF3 556 aa14.55□□□□□ -0.08
HERC1-205ENST00000559886 F8W031 263 aaPredicted RBP14.55□□□□□ -0.08
HERC1-205ENST00000559886 PRKAB2O43741 272 aa14.55□□□□□ -0.08
HERC1-205ENST00000559886 RAD17O75943 681 aa14.55□□□□□ -0.08
HERC1-205ENST00000559886 APPP05067 770 aa14.55□□□□□ -0.08
HERC1-205ENST00000559886 ZKSCAN1P17029 563 aaPredicted RBP14.55□□□□□ -0.08
HERC1-205ENST00000559886 TSGA10IPQ3SY00 556 aa14.55□□□□□ -0.08
HERC1-205ENST00000559886 CERS3Q8IU89 383 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms