RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 H7C1D1 291 aa12.36□□□□□ -0.43
CARMIL3-202ENST00000559694 SCNN1DP51172 638 aa12.36□□□□□ -0.43
CARMIL3-202ENST00000559694 EIF5P55010 431 aaKnown RBP12.36□□□□□ -0.43
CARMIL3-202ENST00000559694 SLC26A6Q9BXS9 759 aa12.36□□□□□ -0.43
CARMIL3-202ENST00000559694 KRT18P05783 430 aaKnown RBP12.35□□□□□ -0.43
CARMIL3-202ENST00000559694 TTLL6Q8N841 843 aa12.35□□□□□ -0.43
CARMIL3-202ENST00000559694 FBXO41Q8TF61 875 aa12.35□□□□□ -0.43
CARMIL3-202ENST00000559694 DBNLQ9UJU6 430 aaKnown RBP12.35□□□□□ -0.43
CARMIL3-202ENST00000559694 LEMD3Q9Y2U8 911 aa12.35□□□□□ -0.43
CARMIL3-202ENST00000559694 KIF20BQ96Q89 1820 aa12.35□□□□□ -0.43
CARMIL3-202ENST00000559694 SNAP23O00161 211 aa12.35□□□□□ -0.43
CARMIL3-202ENST00000559694 PRKG1Q13976 671 aa12.35□□□□□ -0.43
CARMIL3-202ENST00000559694 DPY19L2Q6NUT2 758 aa12.35□□□□□ -0.43
CARMIL3-202ENST00000559694 Q6ZUG5 572 aa12.35□□□□□ -0.43
CARMIL3-202ENST00000559694 CD163L1Q9NR16 1453 aa12.35□□□□□ -0.43
CARMIL3-202ENST00000559694 SSBP05455 408 aaKnown RBP eCLIP12.35□□□□□ -0.43
CARMIL3-202ENST00000559694 MAPKAPK5Q8IW41 473 aa12.35□□□□□ -0.43
CARMIL3-202ENST00000559694 LINC00116Q8NCU8 138 aa12.35□□□□□ -0.43
CARMIL3-202ENST00000559694 ZKSCAN3Q9BRR0 538 aa12.35□□□□□ -0.43
CARMIL3-202ENST00000559694 DBNDD1Q9H9R9 158 aa12.35□□□□□ -0.43
CARMIL3-202ENST00000559694 C21orf2O43822 256 aa12.34□□□□□ -0.43
CARMIL3-202ENST00000559694 NPR1P16066 1061 aa12.34□□□□□ -0.43
CARMIL3-202ENST00000559694 SPATA32Q96LK8 384 aa12.34□□□□□ -0.43
CARMIL3-202ENST00000559694 ZHX3Q9H4I2 956 aa12.34□□□□□ -0.43
CARMIL3-202ENST00000559694 CFAP45Q9UL16 551 aa12.34□□□□□ -0.43
CARMIL3-202ENST00000559694 DYNC1I1O14576 645 aa12.34□□□□□ -0.43
CARMIL3-202ENST00000559694 TEKT1Q969V4 418 aa12.34□□□□□ -0.43
CARMIL3-202ENST00000559694 RAD50Q92878 1312 aa12.34□□□□□ -0.43
CARMIL3-202ENST00000559694 GRAPQ13588 217 aa12.33□□□□□ -0.43
CARMIL3-202ENST00000559694 GRAPLQ8TC17 118 aaPredicted RBP12.33□□□□□ -0.43
CARMIL3-202ENST00000559694 TGFBRAP1Q8WUH2 860 aa12.33□□□□□ -0.43
CARMIL3-202ENST00000559694 TLR7Q9NYK1 1049 aaKnown RBP12.33□□□□□ -0.43
CARMIL3-202ENST00000559694 IBTKQ9P2D0 1353 aaPredicted RBP12.33□□□□□ -0.43
CARMIL3-202ENST00000559694 CCDC194A0A1B0GVG4 234 aa12.33□□□□□ -0.44
CARMIL3-202ENST00000559694 CIAO1O76071 339 aa12.33□□□□□ -0.44
CARMIL3-202ENST00000559694 ANAPC15P60006 121 aa12.33□□□□□ -0.44
CARMIL3-202ENST00000559694 RAB3GAP1Q15042 981 aa12.33□□□□□ -0.44
CARMIL3-202ENST00000559694 EZH2Q15910 746 aaKnown RBP12.33□□□□□ -0.44
CARMIL3-202ENST00000559694 DALRD3Q5D0E6 543 aaKnown RBP12.33□□□□□ -0.44
CARMIL3-202ENST00000559694 RC3H1Q5TC82 1133 aaKnown RBP12.33□□□□□ -0.44
CARMIL3-202ENST00000559694 CUL5Q93034 780 aa12.33□□□□□ -0.44
CARMIL3-202ENST00000559694 MASTLQ96GX5 879 aa12.33□□□□□ -0.44
CARMIL3-202ENST00000559694 ISCA1Q9BUE6 129 aa12.33□□□□□ -0.44
CARMIL3-202ENST00000559694 UBR1Q8IWV7 1749 aa12.33□□□□□ -0.44
CARMIL3-202ENST00000559694 CPA1P15085 419 aa12.33□□□□□ -0.44
CARMIL3-202ENST00000559694 EAPPQ56P03 285 aaPredicted RBP12.33□□□□□ -0.44
CARMIL3-202ENST00000559694 CCDC178Q5BJE1 867 aa12.33□□□□□ -0.44
CARMIL3-202ENST00000559694 TMC4Q7Z404 712 aa12.33□□□□□ -0.44
CARMIL3-202ENST00000559694 NOC3LQ8WTT2 800 aaKnown RBP12.33□□□□□ -0.44
CARMIL3-202ENST00000559694 USP40Q9NVE5 1235 aa12.33□□□□□ -0.44
CARMIL3-202ENST00000559694 B4E1Z4 1266 aa12.33□□□□□ -0.44
CARMIL3-202ENST00000559694 GPS2Q13227 327 aa12.33□□□□□ -0.44
CARMIL3-202ENST00000559694 CCDC112Q8NEF3 446 aa12.33□□□□□ -0.44
CARMIL3-202ENST00000559694 AOX1Q06278 1338 aa12.32□□□□□ -0.44
CARMIL3-202ENST00000559694 SGSM2O43147 1006 aa12.32□□□□□ -0.44
CARMIL3-202ENST00000559694 RTN1Q16799 776 aa12.32□□□□□ -0.44
CARMIL3-202ENST00000559694 FNBP4Q8N3X1 1017 aaPredicted RBP12.32□□□□□ -0.44
CARMIL3-202ENST00000559694 ANKRD20A12PQ8NF67 263 aa12.32□□□□□ -0.44
CARMIL3-202ENST00000559694 PCMTD1Q96MG8 357 aaPredicted RBP12.32□□□□□ -0.44
CARMIL3-202ENST00000559694 RAD17O75943 681 aa12.32□□□□□ -0.44
CARMIL3-202ENST00000559694 DHX32Q7L7V1 743 aaKnown RBP12.32□□□□□ -0.44
CARMIL3-202ENST00000559694 SIRT2Q8IXJ6 389 aa12.32□□□□□ -0.44
CARMIL3-202ENST00000559694 CELF1Q92879 486 aaKnown RBP12.32□□□□□ -0.44
CARMIL3-202ENST00000559694 TMX3Q96JJ7 454 aa12.32□□□□□ -0.44
CARMIL3-202ENST00000559694 GPR101Q96P66 508 aaPredicted RBP12.32□□□□□ -0.44
CARMIL3-202ENST00000559694 RBM27Q9P2N5 1060 aaKnown RBP12.32□□□□□ -0.44
CARMIL3-202ENST00000559694 ECM2O94769 699 aaPredicted RBP12.32□□□□□ -0.44
CARMIL3-202ENST00000559694 PDE6AP16499 860 aa12.32□□□□□ -0.44
CARMIL3-202ENST00000559694 CCDC93Q567U6 631 aa12.32□□□□□ -0.44
CARMIL3-202ENST00000559694 SEC62Q99442 399 aaKnown RBP12.32□□□□□ -0.44
CARMIL3-202ENST00000559694 PIM2Q9P1W9 311 aa12.32□□□□□ -0.44
CARMIL3-202ENST00000559694 OFD1O75665 1012 aa12.31□□□□□ -0.44
CARMIL3-202ENST00000559694 PDIA4P13667 645 aaKnown RBP12.31□□□□□ -0.44
CARMIL3-202ENST00000559694 RXRAP19793 462 aa12.31□□□□□ -0.44
CARMIL3-202ENST00000559694 GJB2P29033 226 aa12.31□□□□□ -0.44
CARMIL3-202ENST00000559694 CHMP4BP1P59074 171 aa12.31□□□□□ -0.44
CARMIL3-202ENST00000559694 ARGLU1Q9NWB6 273 aaPredicted RBP12.31□□□□□ -0.44
CARMIL3-202ENST00000559694 ITSN1Q15811 1721 aa12.31□□□□□ -0.44
CARMIL3-202ENST00000559694 CCDC192P0DO97 292 aa12.31□□□□□ -0.44
CARMIL3-202ENST00000559694 TRIM28Q13263 835 aaKnown RBP12.31□□□□□ -0.44
CARMIL3-202ENST00000559694 ZSCAN23Q3MJ62 389 aa12.31□□□□□ -0.44
CARMIL3-202ENST00000559694 PI16Q6UXB8 463 aa12.31□□□□□ -0.44
CARMIL3-202ENST00000559694 MNS1Q8NEH6 495 aa12.31□□□□□ -0.44
CARMIL3-202ENST00000559694 USP26Q9BXU7 913 aa12.31□□□□□ -0.44
CARMIL3-202ENST00000559694 SASH1O94885 1247 aa12.31□□□□□ -0.44
CARMIL3-202ENST00000559694 TMEM132AQ24JP5 1023 aa12.31□□□□□ -0.44
CARMIL3-202ENST00000559694 PPP4R3BQ5MIZ7 849 aa12.31□□□□□ -0.44
CARMIL3-202ENST00000559694 BSDC1Q9NW68 430 aaPredicted RBP12.31□□□□□ -0.44
CARMIL3-202ENST00000559694 NRKQ7Z2Y5 1582 aa12.31□□□□□ -0.44
CARMIL3-202ENST00000559694 COL3A1P02461 1466 aaPredicted RBP12.31□□□□□ -0.44
CARMIL3-202ENST00000559694 HAUS7Q99871 368 aa12.3□□□□□ -0.44
CARMIL3-202ENST00000559694 USP25Q9UHP3 1055 aa12.3□□□□□ -0.44
CARMIL3-202ENST00000559694 ANKRD26Q9UPS8 1709 aa12.3□□□□□ -0.44
CARMIL3-202ENST00000559694 USP17L12C9JPN9 530 aa12.3□□□□□ -0.44
CARMIL3-202ENST00000559694 USP17L21D6R901 530 aa12.3□□□□□ -0.44
CARMIL3-202ENST00000559694 GNAQP50148 359 aa12.3□□□□□ -0.44
CARMIL3-202ENST00000559694 APOBRQ0VD83 1088 aa12.3□□□□□ -0.44
CARMIL3-202ENST00000559694 TSR1Q2NL82 804 aaKnown RBP12.3□□□□□ -0.44
CARMIL3-202ENST00000559694 TFIP11Q9UBB9 837 aaKnown RBP12.3□□□□□ -0.44
CARMIL3-202ENST00000559694 MEGF6O75095 1541 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms