RNA–Protein interactions for RNA: ENST00000559573.3

FAM227B-208, Transcript of family with sequence similarity 227 member B, human

TSL 3

Gene FAM227B, Length 2,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM227B-208	ENST00000559573	CFAP100	Q494V2	611 aa		12.43	□□□□□ -0.42
FAM227B-208	ENST00000559573	CHADL	Q6NUI6	762 aa		12.43	□□□□□ -0.42
FAM227B-208	ENST00000559573	TDRD3	Q9H7E2	651 aa	Known RBP	12.43	□□□□□ -0.42
FAM227B-208	ENST00000559573	OGFOD1	Q8N543	542 aa		12.42	□□□□□ -0.42
FAM227B-208	ENST00000559573	DPF2	Q92785	391 aa		12.42	□□□□□ -0.42
FAM227B-208	ENST00000559573	CCDC136	Q96JN2	1154 aa		12.42	□□□□□ -0.42
FAM227B-208	ENST00000559573	VEZT	Q9HBM0	779 aa		12.42	□□□□□ -0.42
FAM227B-208	ENST00000559573	SLC4A8	Q2Y0W8	1093 aa		12.42	□□□□□ -0.42
FAM227B-208	ENST00000559573	TTC39A	Q5SRH9	613 aa		12.42	□□□□□ -0.42
FAM227B-208	ENST00000559573	LDHD	Q86WU2	507 aa		12.42	□□□□□ -0.42
FAM227B-208	ENST00000559573	AGBL3	Q8NEM8	1001 aa		12.42	□□□□□ -0.42
FAM227B-208	ENST00000559573	CST9	Q5W186	159 aa		12.41	□□□□□ -0.42
FAM227B-208	ENST00000559573	KRT26	Q7Z3Y9	468 aa		12.41	□□□□□ -0.42
FAM227B-208	ENST00000559573	SMC1B	Q8NDV3	1235 aa		12.41	□□□□□ -0.42
FAM227B-208	ENST00000559573	IL27	Q8NEV9	243 aa		12.41	□□□□□ -0.42
FAM227B-208	ENST00000559573	BOLA2	Q9H3K6	86 aa		12.41	□□□□□ -0.42
FAM227B-208	ENST00000559573	AKAP2	Q9Y2D5	859 aa		12.41	□□□□□ -0.42
FAM227B-208	ENST00000559573	TCP10L2	B9ZVM9	353 aa		12.41	□□□□□ -0.42
FAM227B-208	ENST00000559573	HMMR	O75330	724 aa		12.41	□□□□□ -0.42
FAM227B-208	ENST00000559573	CYP2E1	P05181	493 aa	Predicted RBP	12.41	□□□□□ -0.42
FAM227B-208	ENST00000559573	ZNF280A	P59817	542 aa	Predicted RBP	12.41	□□□□□ -0.42
FAM227B-208	ENST00000559573	ANKRD45	Q5TZF3	282 aa		12.41	□□□□□ -0.42
FAM227B-208	ENST00000559573	PNMA8A	Q86V59	439 aa	Predicted RBP	12.41	□□□□□ -0.42
FAM227B-208	ENST00000559573	SPATA5	Q8NB90	893 aa		12.41	□□□□□ -0.42
FAM227B-208	ENST00000559573	DNAJC2	Q99543	621 aa	Known RBP	12.41	□□□□□ -0.42
FAM227B-208	ENST00000559573	AKAP11	Q9UKA4	1901 aa		12.4	□□□□□ -0.42
FAM227B-208	ENST00000559573	CRK	P46108	304 aa		12.4	□□□□□ -0.42
FAM227B-208	ENST00000559573	USP50	Q70EL3	339 aa	Predicted RBP	12.4	□□□□□ -0.42
FAM227B-208	ENST00000559573	RBM46	Q8TBY0	533 aa	Known RBP	12.4	□□□□□ -0.42
FAM227B-208	ENST00000559573	PIH1D3	Q9NQM4	214 aa	Known RBP	12.4	□□□□□ -0.42
FAM227B-208	ENST00000559573	MKRN1	Q9UHC7	482 aa	Known RBP	12.4	□□□□□ -0.42
FAM227B-208	ENST00000559573	FBXO3	Q9UK99	471 aa		12.4	□□□□□ -0.42
FAM227B-208	ENST00000559573	FAM205A	Q6ZU69	1335 aa		12.4	□□□□□ -0.43
FAM227B-208	ENST00000559573	DLGAP5	Q15398	846 aa		12.39	□□□□□ -0.43
FAM227B-208	ENST00000559573	ADGRA1	Q86SQ6	560 aa		12.39	□□□□□ -0.43
FAM227B-208	ENST00000559573	LRRCC1	Q9C099	1032 aa		12.39	□□□□□ -0.43
FAM227B-208	ENST00000559573	LNPK	Q9C0E8	428 aa		12.39	□□□□□ -0.43
FAM227B-208	ENST00000559573	DCTPP1	Q9H773	170 aa		12.39	□□□□□ -0.43
FAM227B-208	ENST00000559573	IFIT2	P09913	472 aa	Known RBP	12.39	□□□□□ -0.43
FAM227B-208	ENST00000559573	RPS12	P25398	132 aa	Known RBP	12.39	□□□□□ -0.43
FAM227B-208	ENST00000559573	TCP10	Q12799	353 aa		12.39	□□□□□ -0.43
FAM227B-208	ENST00000559573	KIF1BP	Q96EK5	621 aa		12.39	□□□□□ -0.43
FAM227B-208	ENST00000559573	ARAP2	Q8WZ64	1704 aa		12.38	□□□□□ -0.43
FAM227B-208	ENST00000559573	MKI67	P46013	3256 aa	Known RBP	12.38	□□□□□ -0.43
FAM227B-208	ENST00000559573	CELF2	O95319	508 aa	Known RBP	12.38	□□□□□ -0.43
FAM227B-208	ENST00000559573	MECOM	Q03112	1051 aa		12.38	□□□□□ -0.43
FAM227B-208	ENST00000559573	ZFPM1	Q8IX07	1006 aa		12.38	□□□□□ -0.43
FAM227B-208	ENST00000559573	CLASRP	Q8N2M8	674 aa	Known RBP	12.38	□□□□□ -0.43
FAM227B-208	ENST00000559573	IPO9	Q96P70	1041 aa	Known RBP	12.38	□□□□□ -0.43
FAM227B-208	ENST00000559573	RAI14	Q9P0K7	980 aa		12.38	□□□□□ -0.43
FAM227B-208	ENST00000559573	SPDYE2B	A6NHP3	402 aa		12.38	□□□□□ -0.43
FAM227B-208	ENST00000559573	SPDYE6	P0CI01	402 aa		12.38	□□□□□ -0.43
FAM227B-208	ENST00000559573	HSPA6	P17066	643 aa		12.38	□□□□□ -0.43
FAM227B-208	ENST00000559573	NFIA	Q12857	509 aa		12.38	□□□□□ -0.43
FAM227B-208	ENST00000559573	CCDC158	Q5M9N0	1113 aa		12.38	□□□□□ -0.43
FAM227B-208	ENST00000559573	TMEM39B	Q9GZU3	492 aa		12.38	□□□□□ -0.43
FAM227B-208	ENST00000559573	MYH2	Q9UKX2	1941 aa		12.37	□□□□□ -0.43
FAM227B-208	ENST00000559573	GOLIM4	O00461	696 aa		12.37	□□□□□ -0.43
FAM227B-208	ENST00000559573	IDH1	O75874	414 aa	Known RBP	12.37	□□□□□ -0.43
FAM227B-208	ENST00000559573	LDHB	P07195	334 aa	Known RBP	12.37	□□□□□ -0.43
FAM227B-208	ENST00000559573	APOBEC3H	Q6NTF7	200 aa	Known RBP	12.37	□□□□□ -0.43
FAM227B-208	ENST00000559573	DCPS	Q96C86	337 aa	Known RBP	12.37	□□□□□ -0.43
FAM227B-208	ENST00000559573	GNL3L	Q9NVN8	582 aa	Known RBP	12.37	□□□□□ -0.43
FAM227B-208	ENST00000559573	HTT	P42858	3142 aa		12.37	□□□□□ -0.43
FAM227B-208	ENST00000559573	ARID4A	P29374	1257 aa	Predicted RBP	12.37	□□□□□ -0.43
FAM227B-208	ENST00000559573	MKRN3	Q13064	507 aa	Known RBP	12.37	□□□□□ -0.43
FAM227B-208	ENST00000559573	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.37	□□□□□ -0.43
FAM227B-208	ENST00000559573	MIGA1	Q8NAN2	632 aa		12.37	□□□□□ -0.43
FAM227B-208	ENST00000559573	LRP2BP	Q9P2M1	347 aa		12.37	□□□□□ -0.43
FAM227B-208	ENST00000559573	DENND2A	Q9ULE3	1009 aa		12.37	□□□□□ -0.43
FAM227B-208	ENST00000559573	DAGLA	Q9Y4D2	1042 aa		12.37	□□□□□ -0.43
FAM227B-208	ENST00000559573	PASK	Q96RG2	1323 aa		12.36	□□□□□ -0.43
FAM227B-208	ENST00000559573	HDAC9	Q9UKV0	1011 aa		12.36	□□□□□ -0.43
FAM227B-208	ENST00000559573	ANP32A	P39687	249 aa	Known RBP	12.35	□□□□□ -0.43
FAM227B-208	ENST00000559573	DYNLL1	P63167	89 aa	Known RBP	12.35	□□□□□ -0.43
FAM227B-208	ENST00000559573	EVX2	Q03828	476 aa		12.35	□□□□□ -0.43
FAM227B-208	ENST00000559573	PICALM	Q13492	652 aa		12.35	□□□□□ -0.43
FAM227B-208	ENST00000559573	NBPF12	Q5TAG4	269 aa	Predicted RBP	12.35	□□□□□ -0.43
FAM227B-208	ENST00000559573	DZIP1	Q86YF9	867 aa	Known RBP	12.35	□□□□□ -0.43
FAM227B-208	ENST00000559573	SULF1	Q8IWU6	871 aa		12.35	□□□□□ -0.43
FAM227B-208	ENST00000559573	WDR66	Q8TBY9	1149 aa		12.35	□□□□□ -0.43
FAM227B-208	ENST00000559573	ZIC5	Q96T25	663 aa		12.35	□□□□□ -0.43
FAM227B-208	ENST00000559573	ZNF70	Q9UC06	446 aa	Predicted RBP	12.35	□□□□□ -0.43
FAM227B-208	ENST00000559573	ABT1	Q9ULW3	272 aa	Known RBP	12.35	□□□□□ -0.43
FAM227B-208	ENST00000559573	AK9	Q5TCS8	1911 aa		12.35	□□□□□ -0.43
FAM227B-208	ENST00000559573	APLP1	P51693	650 aa		12.35	□□□□□ -0.43
FAM227B-208	ENST00000559573	ERC1	Q8IUD2	1116 aa		12.35	□□□□□ -0.43
FAM227B-208	ENST00000559573	TEKT1	Q969V4	418 aa		12.35	□□□□□ -0.43
FAM227B-208	ENST00000559573	CDCA5	Q96FF9	252 aa		12.35	□□□□□ -0.43
FAM227B-208	ENST00000559573	ZBED3	Q96IU2	234 aa	Predicted RBP	12.35	□□□□□ -0.43
FAM227B-208	ENST00000559573	DEFB129	Q9H1M3	183 aa		12.35	□□□□□ -0.43
FAM227B-208	ENST00000559573	AATF	Q9NY61	560 aa	Known RBP eCLIP	12.35	□□□□□ -0.43
FAM227B-208	ENST00000559573	ZBTB47	Q9UFB7	747 aa	Predicted RBP	12.35	□□□□□ -0.43
FAM227B-208	ENST00000559573	MYO3B	Q8WXR4	1341 aa		12.35	□□□□□ -0.43
FAM227B-208	ENST00000559573	FAM196B	A6NMK8	535 aa		12.34	□□□□□ -0.43
FAM227B-208	ENST00000559573	RASA3	Q14644	834 aa		12.34	□□□□□ -0.43
FAM227B-208	ENST00000559573	CDC42EP5	Q6NZY7	148 aa		12.34	□□□□□ -0.43
FAM227B-208	ENST00000559573	CDC37L1	Q7L3B6	337 aa		12.34	□□□□□ -0.43
FAM227B-208	ENST00000559573	MIGA2	Q7L4E1	593 aa		12.34	□□□□□ -0.43
FAM227B-208	ENST00000559573	NSUN4	Q96CB9	384 aa	Known RBP	12.34	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms