RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 LDHBP07195 334 aaKnown RBP24.83■■□□□ 1.56
TSPAN3-207ENST00000559494 CRKP46108 304 aa24.83■■□□□ 1.56
TSPAN3-207ENST00000559494 PRMT6Q96LA8 375 aaPredicted RBP24.83■■□□□ 1.56
TSPAN3-207ENST00000559494 MRIQ9BWK5 157 aa24.83■■□□□ 1.56
TSPAN3-207ENST00000559494 ABCF2Q9UG63 623 aa24.83■■□□□ 1.56
TSPAN3-207ENST00000559494 SERPINA10Q9UK55 444 aa24.83■■□□□ 1.56
TSPAN3-207ENST00000559494 ZAP70P43403 619 aa24.82■■□□□ 1.56
TSPAN3-207ENST00000559494 HDLBPQ00341 1268 aaKnown RBP24.82■■□□□ 1.56
TSPAN3-207ENST00000559494 SMC5Q8IY18 1101 aa24.82■■□□□ 1.56
TSPAN3-207ENST00000559494 ZGPATQ8N5A5 531 aaKnown RBP24.82■■□□□ 1.56
TSPAN3-207ENST00000559494 SPDYE2BA6NHP3 402 aa24.81■■□□□ 1.56
TSPAN3-207ENST00000559494 CYP2E1P05181 493 aaPredicted RBP24.81■■□□□ 1.56
TSPAN3-207ENST00000559494 SPDYE6P0CI01 402 aa24.81■■□□□ 1.56
TSPAN3-207ENST00000559494 RBM5P52756 815 aaKnown RBP eCLIP24.81■■□□□ 1.56
TSPAN3-207ENST00000559494 ANKRD45Q5TZF3 282 aa24.81■■□□□ 1.56
TSPAN3-207ENST00000559494 GGA3Q9NZ52 723 aa24.81■■□□□ 1.56
TSPAN3-207ENST00000559494 AOX1Q06278 1338 aa24.81■■□□□ 1.56
TSPAN3-207ENST00000559494 ANGEL2Q5VTE6 544 aaKnown RBP24.8■■□□□ 1.56
TSPAN3-207ENST00000559494 SPTY2D1Q68D10 685 aaPredicted RBP24.8■■□□□ 1.56
TSPAN3-207ENST00000559494 DCPSQ96C86 337 aaKnown RBP24.8■■□□□ 1.56
TSPAN3-207ENST00000559494 GLIS2Q9BZE0 524 aaPredicted RBP24.8■■□□□ 1.56
TSPAN3-207ENST00000559494 NDUFB9Q9Y6M9 179 aa24.8■■□□□ 1.56
TSPAN3-207ENST00000559494 FMR1Q06787 632 aaKnown RBP eCLIP24.79■■□□□ 1.56
TSPAN3-207ENST00000559494 HHIPL2Q6UWX4 724 aa24.79■■□□□ 1.56
TSPAN3-207ENST00000559494 ERICH6Q7L0X2 663 aa24.79■■□□□ 1.56
TSPAN3-207ENST00000559494 USP48Q86UV5 1035 aa24.79■■□□□ 1.56
TSPAN3-207ENST00000559494 TEKT1Q969V4 418 aa24.79■■□□□ 1.56
TSPAN3-207ENST00000559494 MAST3O60307 1309 aa24.79■■□□□ 1.56
TSPAN3-207ENST00000559494 PASKQ96RG2 1323 aa24.78■■□□□ 1.56
TSPAN3-207ENST00000559494 DIXDC1Q155Q3 683 aa24.78■■□□□ 1.56
TSPAN3-207ENST00000559494 DLK2Q6UY11 383 aa24.78■■□□□ 1.56
TSPAN3-207ENST00000559494 CDC37L1Q7L3B6 337 aa24.78■■□□□ 1.56
TSPAN3-207ENST00000559494 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.78■■□□□ 1.56
TSPAN3-207ENST00000559494 SCAF8Q9UPN6 1271 aaKnown RBP24.78■■□□□ 1.56
TSPAN3-207ENST00000559494 TRAF5O00463 557 aa24.77■■□□□ 1.56
TSPAN3-207ENST00000559494 ATP5JP18859 108 aa24.77■■□□□ 1.56
TSPAN3-207ENST00000559494 ZNF384Q8TF68 577 aa24.77■■□□□ 1.56
TSPAN3-207ENST00000559494 ZDHHC15Q96MV8 337 aa24.77■■□□□ 1.56
TSPAN3-207ENST00000559494 PIH1D3Q9NQM4 214 aaKnown RBP24.77■■□□□ 1.56
TSPAN3-207ENST00000559494 PITPNM2Q9BZ72 1349 aa24.76■■□□□ 1.55
TSPAN3-207ENST00000559494 MECOMQ03112 1051 aa24.76■■□□□ 1.55
TSPAN3-207ENST00000559494 B4GALNT3Q6L9W6 998 aa24.76■■□□□ 1.55
TSPAN3-207ENST00000559494 APOBEC3HQ6NTF7 200 aaKnown RBP24.76■■□□□ 1.55
TSPAN3-207ENST00000559494 KRT26Q7Z3Y9 468 aa24.76■■□□□ 1.55
TSPAN3-207ENST00000559494 OTUD7AQ8TE49 926 aaPredicted RBP24.76■■□□□ 1.55
TSPAN3-207ENST00000559494 BOLA2Q9H3K6 86 aa24.76■■□□□ 1.55
TSPAN3-207ENST00000559494 ANTXR1Q9H6X2 564 aa24.76■■□□□ 1.55
TSPAN3-207ENST00000559494 TDRD3Q9H7E2 651 aaKnown RBP24.76■■□□□ 1.55
TSPAN3-207ENST00000559494 LRP2BPQ9P2M1 347 aa24.76■■□□□ 1.55
TSPAN3-207ENST00000559494 DZIP1Q86YF9 867 aaKnown RBP24.75■■□□□ 1.55
TSPAN3-207ENST00000559494 ECHDC1Q9NTX5 307 aa24.75■■□□□ 1.55
TSPAN3-207ENST00000559494 RAI14Q9P0K7 980 aa24.75■■□□□ 1.55
TSPAN3-207ENST00000559494 DAGLAQ9Y4D2 1042 aa24.75■■□□□ 1.55
TSPAN3-207ENST00000559494 MYO5AQ9Y4I1 1855 aaKnown RBP24.75■■□□□ 1.55
TSPAN3-207ENST00000559494 CLRN2A0PK11 232 aa24.74■■□□□ 1.55
TSPAN3-207ENST00000559494 ADM5C9JUS6 153 aa24.74■■□□□ 1.55
TSPAN3-207ENST00000559494 NSUN4Q96CB9 384 aaKnown RBP24.74■■□□□ 1.55
TSPAN3-207ENST00000559494 FAM163AQ96GL9 167 aaPredicted RBP24.74■■□□□ 1.55
TSPAN3-207ENST00000559494 ZNF70Q9UC06 446 aaPredicted RBP24.74■■□□□ 1.55
TSPAN3-207ENST00000559494 ZBTB47Q9UFB7 747 aaPredicted RBP24.74■■□□□ 1.55
TSPAN3-207ENST00000559494 MYH2Q9UKX2 1941 aa24.74■■□□□ 1.55
TSPAN3-207ENST00000559494 MYO1BO43795 1136 aa24.73■■□□□ 1.55
TSPAN3-207ENST00000559494 SULF1Q8IWU6 871 aa24.73■■□□□ 1.55
TSPAN3-207ENST00000559494 HSPA6P17066 643 aa24.72■■□□□ 1.55
TSPAN3-207ENST00000559494 NUCB1Q02818 461 aa24.72■■□□□ 1.55
TSPAN3-207ENST00000559494 SPDYE2Q495Y8 402 aa24.72■■□□□ 1.55
TSPAN3-207ENST00000559494 TSHZ3Q63HK5 1081 aa24.72■■□□□ 1.55
TSPAN3-207ENST00000559494 EDC3Q96F86 508 aaKnown RBP24.72■■□□□ 1.55
TSPAN3-207ENST00000559494 DNAJC2Q99543 621 aaKnown RBP24.72■■□□□ 1.55
TSPAN3-207ENST00000559494 HAUS7Q99871 368 aa24.72■■□□□ 1.55
TSPAN3-207ENST00000559494 LNPKQ9C0E8 428 aa24.72■■□□□ 1.55
TSPAN3-207ENST00000559494 GAKO14976 1311 aa24.71■■□□□ 1.55
TSPAN3-207ENST00000559494 SALL3Q9BXA9 1300 aa24.71■■□□□ 1.55
TSPAN3-207ENST00000559494 APLP1P51693 650 aa24.71■■□□□ 1.55
TSPAN3-207ENST00000559494 CST9Q5W186 159 aa24.7■■□□□ 1.54
TSPAN3-207ENST00000559494 CHD1LQ86WJ1 897 aa24.7■■□□□ 1.54
TSPAN3-207ENST00000559494 APOBEC3FQ8IUX4 373 aaKnown RBP24.7■■□□□ 1.54
TSPAN3-207ENST00000559494 SLF2Q8IX21 1173 aa24.7■■□□□ 1.54
TSPAN3-207ENST00000559494 GPATCH3Q96I76 525 aa24.7■■□□□ 1.54
TSPAN3-207ENST00000559494 VEZTQ9HBM0 779 aa24.7■■□□□ 1.54
TSPAN3-207ENST00000559494 ECM29Q5VYK3 1845 aa24.7■■□□□ 1.54
TSPAN3-207ENST00000559494 GOLIM4O00461 696 aa24.69■■□□□ 1.54
TSPAN3-207ENST00000559494 PRAMEF18Q5VWM3 479 aa24.69■■□□□ 1.54
TSPAN3-207ENST00000559494 CDC42EP5Q6NZY7 148 aa24.69■■□□□ 1.54
TSPAN3-207ENST00000559494 MROH7-TTC4A0A0A0MT08 1334 aa24.69■■□□□ 1.54
TSPAN3-207ENST00000559494 IGSF3O75054 1194 aa24.68■■□□□ 1.54
TSPAN3-207ENST00000559494 IDH1O75874 414 aaKnown RBP24.68■■□□□ 1.54
TSPAN3-207ENST00000559494 LDHCP07864 332 aa24.68■■□□□ 1.54
TSPAN3-207ENST00000559494 GSTO1P78417 241 aa24.68■■□□□ 1.54
TSPAN3-207ENST00000559494 TTF1Q15361 905 aaPredicted RBP24.68■■□□□ 1.54
TSPAN3-207ENST00000559494 NAA16Q6N069 864 aaPredicted RBP24.68■■□□□ 1.54
TSPAN3-207ENST00000559494 PAG1Q9NWQ8 432 aa24.68■■□□□ 1.54
TSPAN3-207ENST00000559494 TTC41PQ6P2S7 1318 aa24.68■■□□□ 1.54
TSPAN3-207ENST00000559494 GPR75-ASB3A0A0A6YYF3 556 aa24.67■■□□□ 1.54
TSPAN3-207ENST00000559494 MX1P20591 662 aa24.67■■□□□ 1.54
TSPAN3-207ENST00000559494 CACNB3P54284 484 aa24.67■■□□□ 1.54
TSPAN3-207ENST00000559494 PI4K2BQ8TCG2 481 aa24.67■■□□□ 1.54
TSPAN3-207ENST00000559494 CDCA5Q96FF9 252 aa24.67■■□□□ 1.54
TSPAN3-207ENST00000559494 DEFB129Q9H1M3 183 aa24.67■■□□□ 1.54
TSPAN3-207ENST00000559494 USP40Q9NVE5 1235 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms