RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 CBX1P83916 185 aa19.3■□□□□ 0.68
SPG11-215ENST00000559193 TRIM28Q13263 835 aaKnown RBP19.3■□□□□ 0.68
SPG11-215ENST00000559193 CCDC112Q8NEF3 446 aa19.3■□□□□ 0.68
SPG11-215ENST00000559193 NBPF3Q9H094 633 aa19.3■□□□□ 0.68
SPG11-215ENST00000559193 WDR19Q8NEZ3 1342 aa19.29■□□□□ 0.68
SPG11-215ENST00000559193 CPLX1O14810 134 aa19.29■□□□□ 0.68
SPG11-215ENST00000559193 KIF23Q02241 960 aaPredicted RBP19.29■□□□□ 0.68
SPG11-215ENST00000559193 TAF7LQ5H9L4 462 aa19.29■□□□□ 0.68
SPG11-215ENST00000559193 NYAP1Q6ZVC0 841 aa19.29■□□□□ 0.68
SPG11-215ENST00000559193 ZNF213O14771 459 aa19.29■□□□□ 0.68
SPG11-215ENST00000559193 PRDM4Q9UKN5 801 aa19.29■□□□□ 0.68
SPG11-215ENST00000559193 IL2RBP14784 551 aa19.28■□□□□ 0.68
SPG11-215ENST00000559193 U2AF2P26368 475 aaKnown RBP eCLIP19.28■□□□□ 0.68
SPG11-215ENST00000559193 MCAMP43121 646 aa19.28■□□□□ 0.68
SPG11-215ENST00000559193 IFIT5Q13325 482 aaKnown RBP19.28■□□□□ 0.68
SPG11-215ENST00000559193 AXDND1Q5T1B0 1012 aaPredicted RBP19.28■□□□□ 0.68
SPG11-215ENST00000559193 NKX2-3Q8TAU0 364 aa19.28■□□□□ 0.68
SPG11-215ENST00000559193 BPIFA3Q9BQP9 254 aa19.28■□□□□ 0.68
SPG11-215ENST00000559193 DENND2AQ9ULE3 1009 aa19.28■□□□□ 0.68
SPG11-215ENST00000559193 TOGARAM1Q9Y4F4 1720 aa19.28■□□□□ 0.68
SPG11-215ENST00000559193 MYH7P12883 1935 aa19.27■□□□□ 0.68
SPG11-215ENST00000559193 MROH7-TTC4A0A0A0MT08 1334 aa19.27■□□□□ 0.68
SPG11-215ENST00000559193 NAA30Q147X3 362 aaPredicted RBP19.27■□□□□ 0.68
SPG11-215ENST00000559193 ANO1Q5XXA6 986 aa19.27■□□□□ 0.68
SPG11-215ENST00000559193 ZBTB38Q8NAP3 1195 aaPredicted RBP19.27■□□□□ 0.68
SPG11-215ENST00000559193 ZNF592Q92610 1267 aa19.27■□□□□ 0.68
SPG11-215ENST00000559193 OSBPL5Q9H0X9 879 aaPredicted RBP19.27■□□□□ 0.68
SPG11-215ENST00000559193 SYNE4Q8N205 404 aa19.27■□□□□ 0.67
SPG11-215ENST00000559193 ZNF202O95125 648 aa19.26■□□□□ 0.67
SPG11-215ENST00000559193 SLC3A2P08195 630 aaKnown RBP19.26■□□□□ 0.67
SPG11-215ENST00000559193 SYNE3Q6ZMZ3 975 aa19.26■□□□□ 0.67
SPG11-215ENST00000559193 TBC1D10CQ8IV04 446 aa19.26■□□□□ 0.67
SPG11-215ENST00000559193 CCAR2Q8N163 923 aaKnown RBP19.26■□□□□ 0.67
SPG11-215ENST00000559193 RIPOR2Q9Y4F9 1068 aa19.26■□□□□ 0.67
SPG11-215ENST00000559193 SPDYE4A6NLX3 237 aa19.26■□□□□ 0.67
SPG11-215ENST00000559193 PFKFB1P16118 471 aa19.26■□□□□ 0.67
SPG11-215ENST00000559193 ADD2P35612 726 aa19.26■□□□□ 0.67
SPG11-215ENST00000559193 GSDMDP57764 484 aa19.26■□□□□ 0.67
SPG11-215ENST00000559193 PTPN14Q15678 1187 aa19.26■□□□□ 0.67
SPG11-215ENST00000559193 METTL24Q5JXM2 366 aa19.26■□□□□ 0.67
SPG11-215ENST00000559193 ATRNO75882 1429 aa19.25■□□□□ 0.67
SPG11-215ENST00000559193 ZMYM6O95789 1325 aa19.25■□□□□ 0.67
SPG11-215ENST00000559193 BIN1O00499 593 aa19.25■□□□□ 0.67
SPG11-215ENST00000559193 WDHD1O75717 1129 aaPredicted RBP19.25■□□□□ 0.67
SPG11-215ENST00000559193 ZSCAN20P17040 1043 aaPredicted RBP19.25■□□□□ 0.67
SPG11-215ENST00000559193 ZRSR1Q15695 479 aaKnown RBP19.25■□□□□ 0.67
SPG11-215ENST00000559193 KIF6Q6ZMV9 814 aa19.25■□□□□ 0.67
SPG11-215ENST00000559193 AIFM3Q96NN9 605 aa19.25■□□□□ 0.67
SPG11-215ENST00000559193 CARD10Q9BWT7 1032 aa19.25■□□□□ 0.67
SPG11-215ENST00000559193 KCND1Q9NSA2 647 aa19.25■□□□□ 0.67
SPG11-215ENST00000559193 TRMT1Q9NXH9 659 aaKnown RBP19.25■□□□□ 0.67
SPG11-215ENST00000559193 AKAP11Q9UKA4 1901 aa19.25■□□□□ 0.67
SPG11-215ENST00000559193 CMA1P23946 247 aa19.25■□□□□ 0.67
SPG11-215ENST00000559193 NLRP12P59046 1061 aa19.25■□□□□ 0.67
SPG11-215ENST00000559193 CYB5R4Q7L1T6 521 aa19.25■□□□□ 0.67
SPG11-215ENST00000559193 XPO4Q9C0E2 1151 aaKnown RBP19.25■□□□□ 0.67
SPG11-215ENST00000559193 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.25■□□□□ 0.67
SPG11-215ENST00000559193 IMPACTQ9P2X3 320 aa19.25■□□□□ 0.67
SPG11-215ENST00000559193 NCAPHQ15003 741 aa19.24■□□□□ 0.67
SPG11-215ENST00000559193 BRINP3Q76B58 766 aa19.24■□□□□ 0.67
SPG11-215ENST00000559193 DNAJC10Q8IXB1 793 aa19.24■□□□□ 0.67
SPG11-215ENST00000559193 ANGEL1Q9UNK9 670 aaKnown RBP19.24■□□□□ 0.67
SPG11-215ENST00000559193 GREM2Q9H772 168 aa19.24■□□□□ 0.67
SPG11-215ENST00000559193 PIH1D3Q9NQM4 214 aaKnown RBP19.24■□□□□ 0.67
SPG11-215ENST00000559193 IFNKQ9P0W0 207 aa19.24■□□□□ 0.67
SPG11-215ENST00000559193 SH2B2O14492 632 aaPredicted RBP19.23■□□□□ 0.67
SPG11-215ENST00000559193 SMC2O95347 1197 aa19.23■□□□□ 0.67
SPG11-215ENST00000559193 SLC39A14Q15043 492 aa19.23■□□□□ 0.67
SPG11-215ENST00000559193 TMOD3Q9NYL9 352 aa19.23■□□□□ 0.67
SPG11-215ENST00000559193 CDHR2Q9BYE9 1310 aa19.23■□□□□ 0.67
SPG11-215ENST00000559193 ITGA6P23229 1130 aa19.23■□□□□ 0.67
SPG11-215ENST00000559193 MARCKSP29966 332 aaPredicted RBP19.23■□□□□ 0.67
SPG11-215ENST00000559193 TRDNQ13061 729 aa19.23■□□□□ 0.67
SPG11-215ENST00000559193 SLC9C2Q5TAH2 1124 aa19.23■□□□□ 0.67
SPG11-215ENST00000559193 LDHAL6AQ6ZMR3 332 aa19.23■□□□□ 0.67
SPG11-215ENST00000559193 RGS22Q8NE09 1264 aa19.23■□□□□ 0.67
SPG11-215ENST00000559193 ALG1Q9BT22 464 aa19.23■□□□□ 0.67
SPG11-215ENST00000559193 RXRAP19793 462 aa19.22■□□□□ 0.67
SPG11-215ENST00000559193 METAP2P50579 478 aaKnown RBP eCLIP19.22■□□□□ 0.67
SPG11-215ENST00000559193 ARMCX5Q6P1M9 558 aa19.22■□□□□ 0.67
SPG11-215ENST00000559193 VGLL2Q8N8G2 317 aa19.22■□□□□ 0.67
SPG11-215ENST00000559193 TTLL11Q8NHH1 800 aa19.22■□□□□ 0.67
SPG11-215ENST00000559193 SENP2Q9HC62 589 aa19.22■□□□□ 0.67
SPG11-215ENST00000559193 CDC27P30260 824 aa19.22■□□□□ 0.67
SPG11-215ENST00000559193 DMTNQ08495 405 aa19.22■□□□□ 0.67
SPG11-215ENST00000559193 HLFQ16534 295 aa19.22■□□□□ 0.67
SPG11-215ENST00000559193 TMC6Q7Z403 805 aa19.22■□□□□ 0.67
SPG11-215ENST00000559193 VPS37DQ86XT2 251 aa19.22■□□□□ 0.67
SPG11-215ENST00000559193 ZNF512BQ96KM6 892 aaPredicted RBP19.22■□□□□ 0.67
SPG11-215ENST00000559193 ASAP1Q9ULH1 1129 aa19.22■□□□□ 0.67
SPG11-215ENST00000559193 MAP3K15Q6ZN16 1313 aa19.22■□□□□ 0.67
SPG11-215ENST00000559193 GPTP24298 496 aa19.21■□□□□ 0.67
SPG11-215ENST00000559193 GIGYF2Q6Y7W6 1299 aaKnown RBP19.21■□□□□ 0.67
SPG11-215ENST00000559193 KRT40Q6A162 431 aa19.21■□□□□ 0.67
SPG11-215ENST00000559193 APOA5Q6Q788 366 aa19.21■□□□□ 0.67
SPG11-215ENST00000559193 NLRP10Q86W26 655 aa19.21■□□□□ 0.67
SPG11-215ENST00000559193 CCDC150Q8NCX0 1101 aa19.21■□□□□ 0.67
SPG11-215ENST00000559193 ZNF215Q9UL58 517 aaPredicted RBP19.21■□□□□ 0.67
SPG11-215ENST00000559193 CTSWP56202 376 aa19.2■□□□□ 0.66
SPG11-215ENST00000559193 E4F1Q66K89 784 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms