RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 BANK1Q8NDB2 785 aa7.33□□□□□ -1.24
LRRC28-208ENST00000558771 JDP2Q8WYK2 163 aa7.33□□□□□ -1.24
LRRC28-208ENST00000558771 CDK15Q96Q40 435 aa7.33□□□□□ -1.24
LRRC28-208ENST00000558771 MCOLN1Q9GZU1 580 aa7.33□□□□□ -1.24
LRRC28-208ENST00000558771 USP16Q9Y5T5 823 aa7.33□□□□□ -1.24
LRRC28-208ENST00000558771 CASP8AP2Q9UKL3 1982 aa7.33□□□□□ -1.24
LRRC28-208ENST00000558771 MAGEB6P1A0A0J9YX57 407 aa7.32□□□□□ -1.24
LRRC28-208ENST00000558771 PRAMEF22A3QJZ6 481 aa7.32□□□□□ -1.24
LRRC28-208ENST00000558771 TRAF5O00463 557 aa7.32□□□□□ -1.24
LRRC28-208ENST00000558771 MAP2K2P36507 400 aa7.32□□□□□ -1.24
LRRC28-208ENST00000558771 EIF4G2P78344 907 aaKnown RBP eCLIP7.32□□□□□ -1.24
LRRC28-208ENST00000558771 ARID5BQ14865 1188 aa7.32□□□□□ -1.24
LRRC28-208ENST00000558771 TPTE2Q6XPS3 522 aa7.32□□□□□ -1.24
LRRC28-208ENST00000558771 PNMA1Q8ND90 353 aa7.32□□□□□ -1.24
LRRC28-208ENST00000558771 GAS2L2Q8NHY3 880 aa7.32□□□□□ -1.24
LRRC28-208ENST00000558771 PSMD1Q99460 953 aa7.32□□□□□ -1.24
LRRC28-208ENST00000558771 C1QTNF2Q9BXJ5 285 aa7.32□□□□□ -1.24
LRRC28-208ENST00000558771 TRIM34Q9BYJ4 488 aa7.32□□□□□ -1.24
LRRC28-208ENST00000558771 NIP7Q9Y221 180 aaKnown RBP eCLIP7.32□□□□□ -1.24
LRRC28-208ENST00000558771 ZNF652Q9Y2D9 606 aa7.32□□□□□ -1.24
LRRC28-208ENST00000558771 BTBD11A6QL63 1104 aa7.31□□□□□ -1.24
LRRC28-208ENST00000558771 PDE4DIPQ5VU43 2346 aa7.31□□□□□ -1.24
LRRC28-208ENST00000558771 USP50Q70EL3 339 aaPredicted RBP7.31□□□□□ -1.24
LRRC28-208ENST00000558771 ARHGAP9Q9BRR9 750 aa7.31□□□□□ -1.24
LRRC28-208ENST00000558771 DACH1Q9UI36 760 aa7.31□□□□□ -1.24
LRRC28-208ENST00000558771 TIMELESSQ9UNS1 1208 aa7.31□□□□□ -1.24
LRRC28-208ENST00000558771 CEMIPQ8WUJ3 1361 aa7.31□□□□□ -1.24
LRRC28-208ENST00000558771 U2SURPO15042 1029 aaKnown RBP7.3□□□□□ -1.24
LRRC28-208ENST00000558771 CA12O43570 354 aa7.3□□□□□ -1.24
LRRC28-208ENST00000558771 GTF2E1P29083 439 aaPredicted RBP7.3□□□□□ -1.24
LRRC28-208ENST00000558771 PTK2Q05397 1052 aa7.3□□□□□ -1.24
LRRC28-208ENST00000558771 DGKZQ13574 1117 aa7.3□□□□□ -1.24
LRRC28-208ENST00000558771 HLFQ16534 295 aa7.3□□□□□ -1.24
LRRC28-208ENST00000558771 ZNF787Q6DD87 383 aa7.3□□□□□ -1.24
LRRC28-208ENST00000558771 NBPF10Q6P3W6 841 aaKnown RBP7.3□□□□□ -1.24
LRRC28-208ENST00000558771 SAPCD2Q86UD0 394 aa7.3□□□□□ -1.24
LRRC28-208ENST00000558771 SLC51AQ86UW1 340 aa7.3□□□□□ -1.24
LRRC28-208ENST00000558771 LARGE2Q8N3Y3 721 aa7.3□□□□□ -1.24
LRRC28-208ENST00000558771 NBPF15Q8N660 670 aa7.3□□□□□ -1.24
LRRC28-208ENST00000558771 ABCC12Q96J65 1359 aa7.3□□□□□ -1.24
LRRC28-208ENST00000558771 COL3A1P02461 1466 aaPredicted RBP7.3□□□□□ -1.24
LRRC28-208ENST00000558771 CELF2O95319 508 aaKnown RBP7.29□□□□□ -1.24
LRRC28-208ENST00000558771 ADH1CP00326 375 aa7.29□□□□□ -1.24
LRRC28-208ENST00000558771 SNRPA1P09661 255 aaKnown RBP7.29□□□□□ -1.24
LRRC28-208ENST00000558771 GRM5P41594 1212 aa7.29□□□□□ -1.24
LRRC28-208ENST00000558771 NNTQ13423 1086 aa7.29□□□□□ -1.24
LRRC28-208ENST00000558771 CRY2Q49AN0 593 aa7.29□□□□□ -1.24
LRRC28-208ENST00000558771 CC2D2BQ6DHV5 1058 aa7.29□□□□□ -1.24
LRRC28-208ENST00000558771 CIAPIN1Q6FI81 312 aa7.29□□□□□ -1.24
LRRC28-208ENST00000558771 ZBTB33Q86T24 672 aa7.29□□□□□ -1.24
LRRC28-208ENST00000558771 TRMT44Q8IYL2 757 aaKnown RBP7.29□□□□□ -1.24
LRRC28-208ENST00000558771 HHIPL1Q96JK4 782 aa7.29□□□□□ -1.24
LRRC28-208ENST00000558771 OCSTAMPQ9BR26 566 aa7.29□□□□□ -1.24
LRRC28-208ENST00000558771 SNRKQ9NRH2 765 aa7.29□□□□□ -1.24
LRRC28-208ENST00000558771 ADARB2Q9NS39 739 aaKnown RBP7.29□□□□□ -1.24
LRRC28-208ENST00000558771 GPSM3Q9Y4H4 160 aa7.29□□□□□ -1.24
LRRC28-208ENST00000558771 NR5A1Q13285 461 aa7.28□□□□□ -1.24
LRRC28-208ENST00000558771 CC2D1BQ5T0F9 858 aaKnown RBP7.28□□□□□ -1.24
LRRC28-208ENST00000558771 NIM1KQ8IY84 436 aa7.28□□□□□ -1.24
LRRC28-208ENST00000558771 RPGRQ92834 1020 aaKnown RBP7.28□□□□□ -1.24
LRRC28-208ENST00000558771 PHACTR3Q96KR7 559 aa7.28□□□□□ -1.24
LRRC28-208ENST00000558771 ZIC5Q96T25 663 aa7.28□□□□□ -1.24
LRRC28-208ENST00000558771 GLIS2Q9BZE0 524 aaPredicted RBP7.28□□□□□ -1.24
LRRC28-208ENST00000558771 NYXQ9GZU5 481 aa7.28□□□□□ -1.24
LRRC28-208ENST00000558771 ZNF408Q9H9D4 720 aa7.28□□□□□ -1.24
LRRC28-208ENST00000558771 GPRC5DQ9NZD1 345 aa7.28□□□□□ -1.24
LRRC28-208ENST00000558771 TCERG1O14776 1098 aaKnown RBP7.27□□□□□ -1.25
LRRC28-208ENST00000558771 CAPN5O15484 640 aaPredicted RBP7.27□□□□□ -1.25
LRRC28-208ENST00000558771 PPIP5K2O43314 1243 aa7.27□□□□□ -1.25
LRRC28-208ENST00000558771 HOXA10P31260 410 aaPredicted RBP7.27□□□□□ -1.25
LRRC28-208ENST00000558771 CXCL9Q07325 125 aa7.27□□□□□ -1.25
LRRC28-208ENST00000558771 AOC3Q16853 763 aa7.27□□□□□ -1.25
LRRC28-208ENST00000558771 VASH1Q7L8A9 365 aaPredicted RBP7.27□□□□□ -1.25
LRRC28-208ENST00000558771 MAP4K5Q9Y4K4 846 aa7.27□□□□□ -1.25
LRRC28-208ENST00000558771 NPC1L1Q9UHC9 1359 aa7.27□□□□□ -1.25
LRRC28-208ENST00000558771 NUP98P52948 1817 aa7.27□□□□□ -1.25
LRRC28-208ENST00000558771 RIC1Q4ADV7 1423 aa7.27□□□□□ -1.25
LRRC28-208ENST00000558771 KIF7Q2M1P5 1343 aa7.27□□□□□ -1.25
LRRC28-208ENST00000558771 PRKAR2BP31323 418 aa7.26□□□□□ -1.25
LRRC28-208ENST00000558771 GMPSP49915 693 aaPredicted RBP7.26□□□□□ -1.25
LRRC28-208ENST00000558771 HIRAP54198 1017 aaPredicted RBP7.26□□□□□ -1.25
LRRC28-208ENST00000558771 SOX10P56693 466 aa7.26□□□□□ -1.25
LRRC28-208ENST00000558771 NOGQ13253 232 aa7.26□□□□□ -1.25
LRRC28-208ENST00000558771 MCM10Q7L590 875 aa7.26□□□□□ -1.25
LRRC28-208ENST00000558771 NGEFQ8N5V2 710 aa7.26□□□□□ -1.25
LRRC28-208ENST00000558771 MTMR14Q8NCE2 650 aa7.26□□□□□ -1.25
LRRC28-208ENST00000558771 ADAM32Q8TC27 787 aa7.26□□□□□ -1.25
LRRC28-208ENST00000558771 RBM17Q96I25 401 aaKnown RBP7.26□□□□□ -1.25
LRRC28-208ENST00000558771 CRAMP1Q96RY5 1269 aa7.26□□□□□ -1.25
LRRC28-208ENST00000558771 PGAP2Q9UHJ9 254 aa7.26□□□□□ -1.25
LRRC28-208ENST00000558771 UBN2Q6ZU65 1347 aa7.26□□□□□ -1.25
LRRC28-208ENST00000558771 IBTKQ9P2D0 1353 aaPredicted RBP7.25□□□□□ -1.25
LRRC28-208ENST00000558771 ERVV-1B6SEH8 477 aa7.25□□□□□ -1.25
LRRC28-208ENST00000558771 NR3C2P08235 984 aa7.25□□□□□ -1.25
LRRC28-208ENST00000558771 GPTP24298 496 aa7.25□□□□□ -1.25
LRRC28-208ENST00000558771 HUNKP57058 714 aa7.25□□□□□ -1.25
LRRC28-208ENST00000558771 CNGB1Q14028 1251 aaPredicted RBP7.25□□□□□ -1.25
LRRC28-208ENST00000558771 DCTN1Q14203 1278 aa7.25□□□□□ -1.25
LRRC28-208ENST00000558771 SUSD4Q5VX71 490 aa7.25□□□□□ -1.25
LRRC28-208ENST00000558771 CDC37L1Q7L3B6 337 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms