RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 DDX41Q9UJV9 622 aaKnown RBP13.45□□□□□ -0.26
MARK3-213ENST00000558611 CPSF1Q10570 1443 aaKnown RBP13.45□□□□□ -0.26
MARK3-213ENST00000558611 BCL9LQ86UU0 1499 aa13.44□□□□□ -0.26
MARK3-213ENST00000558611 CD163L1Q9NR16 1453 aa13.44□□□□□ -0.26
MARK3-213ENST00000558611 CDK12Q9NYV4 1490 aaPredicted RBP13.44□□□□□ -0.26
MARK3-213ENST00000558611 OPLAHO14841 1288 aa13.44□□□□□ -0.26
MARK3-213ENST00000558611 RELBQ01201 579 aa13.44□□□□□ -0.26
MARK3-213ENST00000558611 CDAN1Q8IWY9 1227 aa13.44□□□□□ -0.26
MARK3-213ENST00000558611 ZNF654Q8IZM8 581 aa13.44□□□□□ -0.26
MARK3-213ENST00000558611 C12orf49Q9H741 205 aa13.44□□□□□ -0.26
MARK3-213ENST00000558611 RGPD5Q99666 1765 aa13.44□□□□□ -0.26
MARK3-213ENST00000558611 ATRNO75882 1429 aa13.44□□□□□ -0.26
MARK3-213ENST00000558611 SSH2Q76I76 1423 aa13.44□□□□□ -0.26
MARK3-213ENST00000558611 BRWD3Q6RI45 1802 aa13.43□□□□□ -0.26
MARK3-213ENST00000558611 KIF20BQ96Q89 1820 aa13.43□□□□□ -0.26
MARK3-213ENST00000558611 LTN1O94822 1766 aa13.43□□□□□ -0.26
MARK3-213ENST00000558611 A6NHS1 94 aa13.43□□□□□ -0.26
MARK3-213ENST00000558611 USP21Q9UK80 565 aa13.43□□□□□ -0.26
MARK3-213ENST00000558611 LMO7Q8WWI1 1683 aa13.43□□□□□ -0.26
MARK3-213ENST00000558611 SLIT3O75094 1523 aa13.43□□□□□ -0.26
MARK3-213ENST00000558611 GLI3P10071 1580 aa13.42□□□□□ -0.26
MARK3-213ENST00000558611 PLA2G4AP47712 749 aa13.42□□□□□ -0.26
MARK3-213ENST00000558611 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.42□□□□□ -0.26
MARK3-213ENST00000558611 SPRYD7Q5W111 196 aa13.42□□□□□ -0.26
MARK3-213ENST00000558611 SNIP1Q8TAD8 396 aaKnown RBP13.42□□□□□ -0.26
MARK3-213ENST00000558611 ZNF395Q9H8N7 513 aaPredicted RBP13.42□□□□□ -0.26
MARK3-213ENST00000558611 DMGDHQ9UI17 866 aaKnown RBP13.42□□□□□ -0.26
MARK3-213ENST00000558611 TNNI2P48788 182 aa13.41□□□□□ -0.26
MARK3-213ENST00000558611 WDR4P57081 412 aaKnown RBP13.41□□□□□ -0.26
MARK3-213ENST00000558611 C4orf17Q53FE4 359 aa13.41□□□□□ -0.26
MARK3-213ENST00000558611 SLC27A3Q5K4L6 730 aa13.41□□□□□ -0.26
MARK3-213ENST00000558611 HS2ST1Q7LGA3 356 aa13.41□□□□□ -0.26
MARK3-213ENST00000558611 SUSD3Q96L08 255 aa13.41□□□□□ -0.26
MARK3-213ENST00000558611 ZFAND3Q9H8U3 227 aa13.41□□□□□ -0.26
MARK3-213ENST00000558611 FNDC3AQ9Y2H6 1198 aaKnown RBP13.41□□□□□ -0.26
MARK3-213ENST00000558611 USP31Q70CQ4 1352 aa13.41□□□□□ -0.26
MARK3-213ENST00000558611 USP19O94966 1318 aa13.4□□□□□ -0.26
MARK3-213ENST00000558611 TNFRSF21O75509 655 aa13.4□□□□□ -0.26
MARK3-213ENST00000558611 RXRBP28702 533 aa13.4□□□□□ -0.26
MARK3-213ENST00000558611 RNF144AP50876 292 aaPredicted RBP13.4□□□□□ -0.26
MARK3-213ENST00000558611 NUTM2GQ5VZR2 741 aa13.4□□□□□ -0.26
MARK3-213ENST00000558611 SNX29Q8TEQ0 813 aa13.4□□□□□ -0.26
MARK3-213ENST00000558611 CCDC74AQ96AQ1 378 aa13.4□□□□□ -0.26
MARK3-213ENST00000558611 INPP5FQ9Y2H2 1132 aa13.4□□□□□ -0.26
MARK3-213ENST00000558611 KTN1Q86UP2 1357 aaKnown RBP13.4□□□□□ -0.26
MARK3-213ENST00000558611 NINLQ9Y2I6 1382 aa13.4□□□□□ -0.26
MARK3-213ENST00000558611 COL18A1P39060 1754 aa13.4□□□□□ -0.26
MARK3-213ENST00000558611 RGS12O14924 1447 aa13.39□□□□□ -0.27
MARK3-213ENST00000558611 TIMP2P16035 220 aa13.39□□□□□ -0.27
MARK3-213ENST00000558611 PDE12Q6L8Q7 609 aaKnown RBP13.39□□□□□ -0.27
MARK3-213ENST00000558611 NBPF10Q6P3W6 841 aaKnown RBP13.39□□□□□ -0.27
MARK3-213ENST00000558611 USP48Q86UV5 1035 aa13.39□□□□□ -0.27
MARK3-213ENST00000558611 ANKIB1Q9P2G1 1089 aa13.39□□□□□ -0.27
MARK3-213ENST00000558611 TRPC5Q9UL62 973 aaPredicted RBP13.39□□□□□ -0.27
MARK3-213ENST00000558611 WNK3Q9BYP7 1800 aa13.39□□□□□ -0.27
MARK3-213ENST00000558611 A0A1W2PP64 1363 aa13.38□□□□□ -0.27
MARK3-213ENST00000558611 IDH3AP50213 366 aa13.38□□□□□ -0.27
MARK3-213ENST00000558611 RACK1P63244 317 aaKnown RBP13.38□□□□□ -0.27
MARK3-213ENST00000558611 RBM6P78332 1123 aaKnown RBP13.38□□□□□ -0.27
MARK3-213ENST00000558611 TMF1P82094 1093 aa13.38□□□□□ -0.27
MARK3-213ENST00000558611 ARID5AQ03989 594 aa13.38□□□□□ -0.27
MARK3-213ENST00000558611 ZNF394Q53GI3 561 aa13.38□□□□□ -0.27
MARK3-213ENST00000558611 NOP9Q86U38 636 aaKnown RBP13.38□□□□□ -0.27
MARK3-213ENST00000558611 DHX38Q92620 1227 aaKnown RBP13.38□□□□□ -0.27
MARK3-213ENST00000558611 DNAJC2Q99543 621 aaKnown RBP13.38□□□□□ -0.27
MARK3-213ENST00000558611 SRCIN1Q9C0H9 1055 aa13.38□□□□□ -0.27
MARK3-213ENST00000558611 EDC4Q6P2E9 1401 aaKnown RBP13.38□□□□□ -0.27
MARK3-213ENST00000558611 TTC21BQ7Z4L5 1316 aa13.38□□□□□ -0.27
MARK3-213ENST00000558611 TTC21AQ8NDW8 1320 aa13.38□□□□□ -0.27
MARK3-213ENST00000558611 KIAA0232Q92628 1395 aa13.37□□□□□ -0.27
MARK3-213ENST00000558611 FAM83GA6ND36 823 aa13.37□□□□□ -0.27
MARK3-213ENST00000558611 TATP17735 454 aaPredicted RBP13.37□□□□□ -0.27
MARK3-213ENST00000558611 DNAJA1P31689 397 aaKnown RBP13.37□□□□□ -0.27
MARK3-213ENST00000558611 ST13P50502 369 aaKnown RBP13.37□□□□□ -0.27
MARK3-213ENST00000558611 ARSDP51689 593 aa13.37□□□□□ -0.27
MARK3-213ENST00000558611 ZNF598Q86UK7 904 aaKnown RBP13.37□□□□□ -0.27
MARK3-213ENST00000558611 NLRP13Q86W25 1043 aa13.37□□□□□ -0.27
MARK3-213ENST00000558611 UNC5CLQ8IV45 518 aa13.37□□□□□ -0.27
MARK3-213ENST00000558611 OSBPL7Q9BZF2 842 aa13.37□□□□□ -0.27
MARK3-213ENST00000558611 LNPKQ9C0E8 428 aa13.37□□□□□ -0.27
MARK3-213ENST00000558611 ZFYVE28Q9HCC9 887 aa13.37□□□□□ -0.27
MARK3-213ENST00000558611 SRA1Q9HD15 236 aaKnown RBP13.37□□□□□ -0.27
MARK3-213ENST00000558611 FAM8A1Q9UBU6 413 aa13.37□□□□□ -0.27
MARK3-213ENST00000558611 FOXD3Q9UJU5 478 aaPredicted RBP13.37□□□□□ -0.27
MARK3-213ENST00000558611 NFAT5O94916 1531 aa13.37□□□□□ -0.27
MARK3-213ENST00000558611 CPDO75976 1380 aa13.36□□□□□ -0.27
MARK3-213ENST00000558611 SPATA31C2B4DYI2 1134 aa13.36□□□□□ -0.27
MARK3-213ENST00000558611 CDK11BP21127 795 aaKnown RBP13.36□□□□□ -0.27
MARK3-213ENST00000558611 GTF2F1P35269 517 aaKnown RBP eCLIP13.36□□□□□ -0.27
MARK3-213ENST00000558611 TAF1CQ15572 869 aaPredicted RBP13.36□□□□□ -0.27
MARK3-213ENST00000558611 ZNF697Q5TEC3 545 aa13.36□□□□□ -0.27
MARK3-213ENST00000558611 HDGFL2Q7Z4V5 671 aaPredicted RBP13.36□□□□□ -0.27
MARK3-213ENST00000558611 MEIOBQ8N635 442 aa13.36□□□□□ -0.27
MARK3-213ENST00000558611 AIDAQ96BJ3 306 aa13.36□□□□□ -0.27
MARK3-213ENST00000558611 SLC12A5Q9H2X9 1139 aa13.36□□□□□ -0.27
MARK3-213ENST00000558611 PKD2L1Q9P0L9 805 aa13.36□□□□□ -0.27
MARK3-213ENST00000558611 EP400Q96L91 3159 aa13.36□□□□□ -0.27
MARK3-213ENST00000558611 INPP5BP32019 993 aa13.35□□□□□ -0.27
MARK3-213ENST00000558611 USPL1Q5W0Q7 1092 aa13.35□□□□□ -0.27
MARK3-213ENST00000558611 ZNF438Q7Z4V0 828 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms