RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 CEP85Q6P2H3 762 aa16.67■□□□□ 0.26
TMED3-205ENST00000558562 SIRT2Q8IXJ6 389 aa16.67■□□□□ 0.26
TMED3-205ENST00000558562 RPAP2Q8IXW5 612 aaPredicted RBP16.67■□□□□ 0.26
TMED3-205ENST00000558562 CERS5Q8N5B7 392 aa16.67■□□□□ 0.26
TMED3-205ENST00000558562 EFCC1Q9HA90 598 aa16.67■□□□□ 0.26
TMED3-205ENST00000558562 RBBP6Q7Z6E9 1792 aaKnown RBP16.66■□□□□ 0.26
TMED3-205ENST00000558562 SNAP23O00161 211 aa16.66■□□□□ 0.26
TMED3-205ENST00000558562 KCNJ4P48050 445 aa16.66■□□□□ 0.26
TMED3-205ENST00000558562 BEND3Q5T5X7 828 aa16.66■□□□□ 0.26
TMED3-205ENST00000558562 NBPF12Q5TAG4 269 aaPredicted RBP16.66■□□□□ 0.26
TMED3-205ENST00000558562 UBE3BQ7Z3V4 1068 aa16.66■□□□□ 0.26
TMED3-205ENST00000558562 ARMC5Q96C12 935 aa16.66■□□□□ 0.26
TMED3-205ENST00000558562 PTPN18Q99952 460 aa16.66■□□□□ 0.26
TMED3-205ENST00000558562 COL1A1P02452 1464 aaPredicted RBP16.66■□□□□ 0.26
TMED3-205ENST00000558562 AOX1Q06278 1338 aa16.66■□□□□ 0.26
TMED3-205ENST00000558562 ITGA6P23229 1130 aa16.65■□□□□ 0.26
TMED3-205ENST00000558562 MPHOSPH8Q99549 860 aa16.65■□□□□ 0.26
TMED3-205ENST00000558562 ANKRD2Q9GZV1 360 aa16.65■□□□□ 0.26
TMED3-205ENST00000558562 VEZTQ9HBM0 779 aa16.65■□□□□ 0.26
TMED3-205ENST00000558562 CD209Q9NNX6 404 aa16.65■□□□□ 0.26
TMED3-205ENST00000558562 CEP290O15078 2479 aa16.65■□□□□ 0.26
TMED3-205ENST00000558562 NEURL1BA8MQ27 555 aa16.64■□□□□ 0.25
TMED3-205ENST00000558562 ALDH1L1O75891 902 aa16.64■□□□□ 0.25
TMED3-205ENST00000558562 UBTFL1P0CB47 393 aaPredicted RBP16.64■□□□□ 0.25
TMED3-205ENST00000558562 SP3Q02447 781 aa16.64■□□□□ 0.25
TMED3-205ENST00000558562 NEXNQ0ZGT2 675 aa16.64■□□□□ 0.25
TMED3-205ENST00000558562 SUPT20HL1Q3ZLR7 823 aa16.64■□□□□ 0.25
TMED3-205ENST00000558562 CFAP100Q494V2 611 aa16.64■□□□□ 0.25
TMED3-205ENST00000558562 OTUD7BQ6GQQ9 843 aa16.64■□□□□ 0.25
TMED3-205ENST00000558562 PRMT6Q96LA8 375 aaPredicted RBP16.64■□□□□ 0.25
TMED3-205ENST00000558562 COLQQ9Y215 455 aaPredicted RBP16.64■□□□□ 0.25
TMED3-205ENST00000558562 JAG2Q9Y219 1238 aa16.64■□□□□ 0.25
TMED3-205ENST00000558562 SZT2Q5T011 3432 aa16.63■□□□□ 0.25
TMED3-205ENST00000558562 H7C1W4 665 aa16.63■□□□□ 0.25
TMED3-205ENST00000558562 HMMRO75330 724 aa16.63■□□□□ 0.25
TMED3-205ENST00000558562 USP2O75604 605 aaPredicted RBP16.63■□□□□ 0.25
TMED3-205ENST00000558562 MYCP01106 439 aaPredicted RBP16.63■□□□□ 0.25
TMED3-205ENST00000558562 CHRNDQ07001 517 aa16.63■□□□□ 0.25
TMED3-205ENST00000558562 HELBQ8NG08 1087 aaPredicted RBP16.63■□□□□ 0.25
TMED3-205ENST00000558562 TMEM106CQ9BVX2 250 aa16.63■□□□□ 0.25
TMED3-205ENST00000558562 USP44Q9H0E7 712 aa16.63■□□□□ 0.25
TMED3-205ENST00000558562 PPP2R3BQ9Y5P8 575 aa16.63■□□□□ 0.25
TMED3-205ENST00000558562 LAMB1P07942 1786 aa16.63■□□□□ 0.25
TMED3-205ENST00000558562 ECM29Q5VYK3 1845 aa16.62■□□□□ 0.25
TMED3-205ENST00000558562 SPDYE2BA6NHP3 402 aa16.62■□□□□ 0.25
TMED3-205ENST00000558562 MYO1BO43795 1136 aa16.62■□□□□ 0.25
TMED3-205ENST00000558562 TAF5LO75529 589 aa16.62■□□□□ 0.25
TMED3-205ENST00000558562 SPDYE6P0CI01 402 aa16.62■□□□□ 0.25
TMED3-205ENST00000558562 IREB2P48200 963 aaKnown RBP16.62■□□□□ 0.25
TMED3-205ENST00000558562 NUCB1Q02818 461 aa16.62■□□□□ 0.25
TMED3-205ENST00000558562 MTMR14Q8NCE2 650 aa16.62■□□□□ 0.25
TMED3-205ENST00000558562 ZNF333Q96JL9 665 aa16.62■□□□□ 0.25
TMED3-205ENST00000558562 ELP3Q9H9T3 547 aa16.62■□□□□ 0.25
TMED3-205ENST00000558562 RBM19Q9Y4C8 960 aaKnown RBP16.62■□□□□ 0.25
TMED3-205ENST00000558562 LRRFIP2Q9Y608 721 aaKnown RBP16.62■□□□□ 0.25
TMED3-205ENST00000558562 TRIOBPQ9H2D6 2365 aa16.62■□□□□ 0.25
TMED3-205ENST00000558562 PDE4AP27815 886 aa16.61■□□□□ 0.25
TMED3-205ENST00000558562 RBM5P52756 815 aaKnown RBP eCLIP16.61■□□□□ 0.25
TMED3-205ENST00000558562 RASA3Q14644 834 aa16.61■□□□□ 0.25
TMED3-205ENST00000558562 ANKRD13AQ8IZ07 590 aa16.61■□□□□ 0.25
TMED3-205ENST00000558562 LINS1Q8NG48 757 aa16.61■□□□□ 0.25
TMED3-205ENST00000558562 CNKSR2Q8WXI2 1034 aa16.61■□□□□ 0.25
TMED3-205ENST00000558562 OPTNQ96CV9 577 aa16.61■□□□□ 0.25
TMED3-205ENST00000558562 PTCH2Q9Y6C5 1203 aa16.61■□□□□ 0.25
TMED3-205ENST00000558562 TESPA1A2RU30 521 aaPredicted RBP16.6■□□□□ 0.25
TMED3-205ENST00000558562 UNCXA6NJT0 531 aa16.6■□□□□ 0.25
TMED3-205ENST00000558562 SLC9C1Q4G0N8 1177 aa16.6■□□□□ 0.25
TMED3-205ENST00000558562 CHD1LQ86WJ1 897 aa16.6■□□□□ 0.25
TMED3-205ENST00000558562 DCTPP1Q9H773 170 aa16.6■□□□□ 0.25
TMED3-205ENST00000558562 IRS2Q9Y4H2 1338 aa16.6■□□□□ 0.25
TMED3-205ENST00000558562 OTOFQ9HC10 1997 aa16.59■□□□□ 0.25
TMED3-205ENST00000558562 GCKRQ14397 625 aa16.59■□□□□ 0.25
TMED3-205ENST00000558562 SLC4A8Q2Y0W8 1093 aa16.59■□□□□ 0.25
TMED3-205ENST00000558562 ANKRD45Q5TZF3 282 aa16.59■□□□□ 0.25
TMED3-205ENST00000558562 CDAN1Q8IWY9 1227 aa16.59■□□□□ 0.25
TMED3-205ENST00000558562 MS4A4AQ96JQ5 239 aa16.59■□□□□ 0.25
TMED3-205ENST00000558562 LNPKQ9C0E8 428 aa16.59■□□□□ 0.25
TMED3-205ENST00000558562 H0YGN5 161 aa16.58■□□□□ 0.24
TMED3-205ENST00000558562 CSF1RP07333 972 aa16.58■□□□□ 0.24
TMED3-205ENST00000558562 CASP7P55210 303 aa16.58■□□□□ 0.24
TMED3-205ENST00000558562 ATP8B2P98198 1209 aa16.58■□□□□ 0.24
TMED3-205ENST00000558562 BRI3BPQ8WY22 251 aa16.58■□□□□ 0.24
TMED3-205ENST00000558562 PLA2G12BQ9BX93 195 aa16.58■□□□□ 0.24
TMED3-205ENST00000558562 BACH2Q9BYV9 841 aa16.58■□□□□ 0.24
TMED3-205ENST00000558562 C9orf78Q9NZ63 289 aaPredicted RBP16.58■□□□□ 0.24
TMED3-205ENST00000558562 ANKRD18BA2A2Z9 1011 aa16.57■□□□□ 0.24
TMED3-205ENST00000558562 IL1R1P14778 569 aa16.57■□□□□ 0.24
TMED3-205ENST00000558562 TAF1CQ15572 869 aaPredicted RBP16.57■□□□□ 0.24
TMED3-205ENST00000558562 ZNF804AQ7Z570 1209 aa16.57■□□□□ 0.24
TMED3-205ENST00000558562 NBPF11Q86T75 865 aa16.57■□□□□ 0.24
TMED3-205ENST00000558562 ZBTB47Q9UFB7 747 aaPredicted RBP16.57■□□□□ 0.24
TMED3-205ENST00000558562 HDAC5Q9UQL6 1122 aa16.57■□□□□ 0.24
TMED3-205ENST00000558562 CCL15-CCL14A0A0B4J2E2 113 aa16.56■□□□□ 0.24
TMED3-205ENST00000558562 GRM8O00222 908 aa16.56■□□□□ 0.24
TMED3-205ENST00000558562 NBPF7P0C2Y1 421 aaPredicted RBP16.56■□□□□ 0.24
TMED3-205ENST00000558562 CCL15Q16663 113 aa16.56■□□□□ 0.24
TMED3-205ENST00000558562 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.56■□□□□ 0.24
TMED3-205ENST00000558562 SH3TC2Q8TF17 1288 aa16.56■□□□□ 0.24
TMED3-205ENST00000558562 ZFYVE28Q9HCC9 887 aa16.56■□□□□ 0.24
TMED3-205ENST00000558562 UTYO14607 1347 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms