RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 SOX1O00570 391 aaPredicted RBP8.72□□□□□ -1.01
LRRC28-207ENST00000558500 ZBTB7BO15156 539 aaPredicted RBP8.72□□□□□ -1.01
LRRC28-207ENST00000558500 TLR2O60603 784 aa8.72□□□□□ -1.01
LRRC28-207ENST00000558500 WDHD1O75717 1129 aaPredicted RBP8.72□□□□□ -1.01
LRRC28-207ENST00000558500 LACTBP83111 547 aaPredicted RBP8.72□□□□□ -1.01
LRRC28-207ENST00000558500 GSE1Q14687 1217 aa8.72□□□□□ -1.01
LRRC28-207ENST00000558500 NEUROD2Q15784 382 aa8.72□□□□□ -1.01
LRRC28-207ENST00000558500 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.72□□□□□ -1.01
LRRC28-207ENST00000558500 PHF12Q96QT6 1004 aa8.72□□□□□ -1.01
LRRC28-207ENST00000558500 TRIM35Q9UPQ4 493 aa8.72□□□□□ -1.01
LRRC28-207ENST00000558500 GABBR2O75899 941 aa8.71□□□□□ -1.02
LRRC28-207ENST00000558500 GJB1P08034 283 aa8.71□□□□□ -1.02
LRRC28-207ENST00000558500 IGHMBP2P38935 993 aaKnown RBP8.71□□□□□ -1.02
LRRC28-207ENST00000558500 GJA8P48165 433 aa8.71□□□□□ -1.02
LRRC28-207ENST00000558500 VGLL4Q14135 290 aa8.71□□□□□ -1.02
LRRC28-207ENST00000558500 HS6ST3Q8IZP7 471 aa8.71□□□□□ -1.02
LRRC28-207ENST00000558500 LRCH3Q96II8 777 aa8.71□□□□□ -1.02
LRRC28-207ENST00000558500 ZNF646O15015 1829 aaPredicted RBP8.7□□□□□ -1.02
LRRC28-207ENST00000558500 DDX58O95786 925 aaKnown RBP8.7□□□□□ -1.02
LRRC28-207ENST00000558500 IGKV5-2P06315 115 aa8.7□□□□□ -1.02
LRRC28-207ENST00000558500 CCL5P13501 91 aa8.7□□□□□ -1.02
LRRC28-207ENST00000558500 KCNJ4P48050 445 aa8.7□□□□□ -1.02
LRRC28-207ENST00000558500 RBM5P52756 815 aaKnown RBP eCLIP8.7□□□□□ -1.02
LRRC28-207ENST00000558500 FKBP1AP62942 108 aaKnown RBP8.7□□□□□ -1.02
LRRC28-207ENST00000558500 MAP3K9P80192 1104 aa8.7□□□□□ -1.02
LRRC28-207ENST00000558500 TNFAIP1Q13829 316 aa8.7□□□□□ -1.02
LRRC28-207ENST00000558500 TPRNQ4KMQ1 711 aa8.7□□□□□ -1.02
LRRC28-207ENST00000558500 C15orf52Q6ZUT6 534 aaKnown RBP8.7□□□□□ -1.02
LRRC28-207ENST00000558500 CDAN1Q8IWY9 1227 aa8.7□□□□□ -1.02
LRRC28-207ENST00000558500 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.7□□□□□ -1.02
LRRC28-207ENST00000558500 TEPSINQ96N21 525 aa8.7□□□□□ -1.02
LRRC28-207ENST00000558500 ZCCHC17Q9NP64 241 aaKnown RBP8.7□□□□□ -1.02
LRRC28-207ENST00000558500 MBIPQ9NS73 344 aa8.7□□□□□ -1.02
LRRC28-207ENST00000558500 SRRDQ9UH36 339 aa8.7□□□□□ -1.02
LRRC28-207ENST00000558500 IRS2Q9Y4H2 1338 aa8.7□□□□□ -1.02
LRRC28-207ENST00000558500 LAMB1P07942 1786 aa8.69□□□□□ -1.02
LRRC28-207ENST00000558500 SPDYE5A6NIY4 337 aa8.69□□□□□ -1.02
LRRC28-207ENST00000558500 BTBD19C9JJ37 291 aa8.69□□□□□ -1.02
LRRC28-207ENST00000558500 SNAP23O00161 211 aa8.69□□□□□ -1.02
LRRC28-207ENST00000558500 CETPP11597 493 aa8.69□□□□□ -1.02
LRRC28-207ENST00000558500 IL1R1P14778 569 aa8.69□□□□□ -1.02
LRRC28-207ENST00000558500 ITGA6P23229 1130 aa8.69□□□□□ -1.02
LRRC28-207ENST00000558500 CTGFP29279 349 aa8.69□□□□□ -1.02
LRRC28-207ENST00000558500 GRK4P32298 578 aa8.69□□□□□ -1.02
LRRC28-207ENST00000558500 CHRNDQ07001 517 aa8.69□□□□□ -1.02
LRRC28-207ENST00000558500 C17orf99Q6UX52 265 aa8.69□□□□□ -1.02
LRRC28-207ENST00000558500 CCDC146Q8IYE0 955 aa8.69□□□□□ -1.02
LRRC28-207ENST00000558500 TRIM47Q96LD4 638 aa8.69□□□□□ -1.02
LRRC28-207ENST00000558500 MPHOSPH8Q99549 860 aa8.69□□□□□ -1.02
LRRC28-207ENST00000558500 ZNF70Q9UC06 446 aaPredicted RBP8.69□□□□□ -1.02
LRRC28-207ENST00000558500 MAP3K2Q9Y2U5 619 aa8.69□□□□□ -1.02
LRRC28-207ENST00000558500 CSADQ9Y600 493 aa8.69□□□□□ -1.02
LRRC28-207ENST00000558500 ELL2O00472 640 aaPredicted RBP8.68□□□□□ -1.02
LRRC28-207ENST00000558500 FARP2O94887 1054 aaPredicted RBP8.68□□□□□ -1.02
LRRC28-207ENST00000558500 ZNF853P0CG23 659 aa8.68□□□□□ -1.02
LRRC28-207ENST00000558500 OSBPP22059 807 aa8.68□□□□□ -1.02
LRRC28-207ENST00000558500 HOXD10P28358 340 aa8.68□□□□□ -1.02
LRRC28-207ENST00000558500 PSMC4P43686 418 aa8.68□□□□□ -1.02
LRRC28-207ENST00000558500 SNAPC2Q13487 334 aa8.68□□□□□ -1.02
LRRC28-207ENST00000558500 KSR2Q6VAB6 950 aa8.68□□□□□ -1.02
LRRC28-207ENST00000558500 ZNF804AQ7Z570 1209 aa8.68□□□□□ -1.02
LRRC28-207ENST00000558500 HELBQ8NG08 1087 aaPredicted RBP8.68□□□□□ -1.02
LRRC28-207ENST00000558500 RAET1EQ8TD07 263 aa8.68□□□□□ -1.02
LRRC28-207ENST00000558500 U2AF1L4Q8WU68 220 aaKnown RBP8.68□□□□□ -1.02
LRRC28-207ENST00000558500 TMEM39BQ9GZU3 492 aa8.68□□□□□ -1.02
LRRC28-207ENST00000558500 RNF208Q9H0X6 261 aa8.68□□□□□ -1.02
LRRC28-207ENST00000558500 TDRD3Q9H7E2 651 aaKnown RBP8.68□□□□□ -1.02
LRRC28-207ENST00000558500 STAP2Q9UGK3 403 aa8.68□□□□□ -1.02
LRRC28-207ENST00000558500 JAG2Q9Y219 1238 aa8.68□□□□□ -1.02
LRRC28-207ENST00000558500 RIPOR2Q9Y4F9 1068 aa8.68□□□□□ -1.02
LRRC28-207ENST00000558500 LAMA3Q16787 3333 aa8.68□□□□□ -1.02
LRRC28-207ENST00000558500 PI4KAP2A4QPH2 592 aa8.67□□□□□ -1.02
LRRC28-207ENST00000558500 H7C1W4 665 aa8.67□□□□□ -1.02
LRRC28-207ENST00000558500 IRF6O14896 467 aa8.67□□□□□ -1.02
LRRC28-207ENST00000558500 EVI5O60447 810 aa8.67□□□□□ -1.02
LRRC28-207ENST00000558500 TAF5LO75529 589 aa8.67□□□□□ -1.02
LRRC28-207ENST00000558500 CSF1RP07333 972 aa8.67□□□□□ -1.02
LRRC28-207ENST00000558500 UBXN2AP68543 259 aa8.67□□□□□ -1.02
LRRC28-207ENST00000558500 CWF19L2Q2TBE0 894 aaKnown RBP8.67□□□□□ -1.02
LRRC28-207ENST00000558500 GPR153Q6NV75 609 aa8.67□□□□□ -1.02
LRRC28-207ENST00000558500 UBE3BQ7Z3V4 1068 aa8.67□□□□□ -1.02
LRRC28-207ENST00000558500 ERO1BQ86YB8 467 aa8.67□□□□□ -1.02
LRRC28-207ENST00000558500 PI4KAP1Q8N8J0 262 aa8.67□□□□□ -1.02
LRRC28-207ENST00000558500 RUNDC1Q96C34 613 aa8.67□□□□□ -1.02
LRRC28-207ENST00000558500 PLA2G12BQ9BX93 195 aa8.67□□□□□ -1.02
LRRC28-207ENST00000558500 BIN2Q9UBW5 565 aaPredicted RBP8.67□□□□□ -1.02
LRRC28-207ENST00000558500 CPA4Q9UI42 421 aa8.67□□□□□ -1.02
LRRC28-207ENST00000558500 SERPINA10Q9UK55 444 aa8.67□□□□□ -1.02
LRRC28-207ENST00000558500 SNCAIPQ9Y6H5 919 aa8.67□□□□□ -1.02
LRRC28-207ENST00000558500 COL6A3P12111 3177 aa8.67□□□□□ -1.02
LRRC28-207ENST00000558500 FAM205AQ6ZU69 1335 aa8.66□□□□□ -1.02
LRRC28-207ENST00000558500 MYPNQ86TC9 1320 aa8.66□□□□□ -1.02
LRRC28-207ENST00000558500 NEURL1BA8MQ27 555 aa8.66□□□□□ -1.02
LRRC28-207ENST00000558500 TCP10L2B9ZVM9 353 aa8.66□□□□□ -1.02
LRRC28-207ENST00000558500 FMNL1O95466 1100 aaPredicted RBP8.66□□□□□ -1.02
LRRC28-207ENST00000558500 SGPL1O95470 568 aa8.66□□□□□ -1.02
LRRC28-207ENST00000558500 TNNI2P48788 182 aa8.66□□□□□ -1.02
LRRC28-207ENST00000558500 NEXNQ0ZGT2 675 aa8.66□□□□□ -1.02
LRRC28-207ENST00000558500 PPIL2Q13356 520 aa8.66□□□□□ -1.02
LRRC28-207ENST00000558500 DZIP1LQ8IYY4 767 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms