RNA–Protein interactions for RNA: ENST00000558445.5

TRPM1-207, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-207ENST00000558445 IGF1RP08069 1367 aa11.38□□□□□ -0.59
TRPM1-207ENST00000558445 ARHGEF12Q9NZN5 1544 aa11.38□□□□□ -0.59
TRPM1-207ENST00000558445 NR1I2O75469 434 aa11.38□□□□□ -0.59
TRPM1-207ENST00000558445 CWF19L1Q69YN2 538 aaKnown RBP11.38□□□□□ -0.59
TRPM1-207ENST00000558445 C11orf57Q6ZUT1 292 aaPredicted RBP11.38□□□□□ -0.59
TRPM1-207ENST00000558445 CCDC13Q8IYE1 715 aa11.38□□□□□ -0.59
TRPM1-207ENST00000558445 C16orf71Q8IYS4 520 aaPredicted RBP11.38□□□□□ -0.59
TRPM1-207ENST00000558445 SYCP3Q8IZU3 236 aa11.38□□□□□ -0.59
TRPM1-207ENST00000558445 ZCRB1Q8TBF4 217 aaKnown RBP11.38□□□□□ -0.59
TRPM1-207ENST00000558445 ERBB3P21860 1342 aa11.38□□□□□ -0.59
TRPM1-207ENST00000558445 GCC2Q8IWJ2 1684 aa11.38□□□□□ -0.59
TRPM1-207ENST00000558445 ELL2O00472 640 aaPredicted RBP11.38□□□□□ -0.59
TRPM1-207ENST00000558445 SLC3A2P08195 630 aaKnown RBP11.38□□□□□ -0.59
TRPM1-207ENST00000558445 HIBCHQ6NVY1 386 aaPredicted RBP11.38□□□□□ -0.59
TRPM1-207ENST00000558445 CACNA2D3Q8IZS8 1091 aa11.38□□□□□ -0.59
TRPM1-207ENST00000558445 ZMAT2Q96NC0 199 aaKnown RBP11.38□□□□□ -0.59
TRPM1-207ENST00000558445 SEC62Q99442 399 aaKnown RBP11.38□□□□□ -0.59
TRPM1-207ENST00000558445 DDX20Q9UHI6 824 aaKnown RBP11.38□□□□□ -0.59
TRPM1-207ENST00000558445 ATXN2Q99700 1313 aaKnown RBP11.37□□□□□ -0.59
TRPM1-207ENST00000558445 ZFXP17010 805 aaPredicted RBP11.37□□□□□ -0.59
TRPM1-207ENST00000558445 NLRP5P59047 1200 aa11.37□□□□□ -0.59
TRPM1-207ENST00000558445 GIGYF2Q6Y7W6 1299 aaKnown RBP11.37□□□□□ -0.59
TRPM1-207ENST00000558445 CPLX4Q7Z7G2 160 aa11.37□□□□□ -0.59
TRPM1-207ENST00000558445 ARL10Q8N8L6 244 aa11.37□□□□□ -0.59
TRPM1-207ENST00000558445 CCDC63Q8NA47 563 aa11.37□□□□□ -0.59
TRPM1-207ENST00000558445 AATFQ9NY61 560 aaKnown RBP eCLIP11.37□□□□□ -0.59
TRPM1-207ENST00000558445 REREQ9P2R6 1566 aa11.37□□□□□ -0.59
TRPM1-207ENST00000558445 KDM5DQ9BY66 1539 aa11.37□□□□□ -0.59
TRPM1-207ENST00000558445 CFAP74Q9C0B2 1584 aa11.37□□□□□ -0.59
TRPM1-207ENST00000558445 CLTAP09496 248 aa11.37□□□□□ -0.59
TRPM1-207ENST00000558445 USP5P45974 858 aa11.37□□□□□ -0.59
TRPM1-207ENST00000558445 ATP11AP98196 1134 aa11.37□□□□□ -0.59
TRPM1-207ENST00000558445 TSNAXIP1Q2TAA8 658 aa11.37□□□□□ -0.59
TRPM1-207ENST00000558445 MAGEC3Q8TD91 643 aa11.37□□□□□ -0.59
TRPM1-207ENST00000558445 ARHGAP45Q92619 1136 aa11.37□□□□□ -0.59
TRPM1-207ENST00000558445 SASH1O94885 1247 aa11.37□□□□□ -0.59
TRPM1-207ENST00000558445 GJA8P48165 433 aa11.37□□□□□ -0.59
TRPM1-207ENST00000558445 STK38Q15208 465 aa11.37□□□□□ -0.59
TRPM1-207ENST00000558445 ZNF232Q9UNY5 417 aa11.37□□□□□ -0.59
TRPM1-207ENST00000558445 ZBTB7BO15156 539 aaPredicted RBP11.36□□□□□ -0.59
TRPM1-207ENST00000558445 ZNF189O75820 626 aaPredicted RBP11.36□□□□□ -0.59
TRPM1-207ENST00000558445 MAP4K4O95819 1239 aaPredicted RBP11.36□□□□□ -0.59
TRPM1-207ENST00000558445 FESP07332 822 aa11.36□□□□□ -0.59
TRPM1-207ENST00000558445 PSMD7P51665 324 aa11.36□□□□□ -0.59
TRPM1-207ENST00000558445 MAP7D1Q3KQU3 841 aa11.36□□□□□ -0.59
TRPM1-207ENST00000558445 RPGRIP1Q96KN7 1286 aa11.36□□□□□ -0.59
TRPM1-207ENST00000558445 TRIM7Q9C029 511 aa11.36□□□□□ -0.59
TRPM1-207ENST00000558445 UNC45AQ9H3U1 944 aa11.36□□□□□ -0.59
TRPM1-207ENST00000558445 ZNF608Q9ULD9 1512 aaPredicted RBP11.36□□□□□ -0.59
TRPM1-207ENST00000558445 SAMD9Q5K651 1589 aa11.36□□□□□ -0.59
TRPM1-207ENST00000558445 CDHR2Q9BYE9 1310 aa11.36□□□□□ -0.59
TRPM1-207ENST00000558445 RAD54L2Q9Y4B4 1467 aa11.36□□□□□ -0.59
TRPM1-207ENST00000558445 RBM47A0AV96 593 aaKnown RBP11.36□□□□□ -0.59
TRPM1-207ENST00000558445 PDHBP11177 359 aa11.36□□□□□ -0.59
TRPM1-207ENST00000558445 VSNL1P62760 191 aa11.36□□□□□ -0.59
TRPM1-207ENST00000558445 MAB21L3Q8N8X9 362 aa11.36□□□□□ -0.59
TRPM1-207ENST00000558445 CORO1CQ9ULV4 474 aaPredicted RBP11.36□□□□□ -0.59
TRPM1-207ENST00000558445 GGCXP38435 758 aa11.36□□□□□ -0.59
TRPM1-207ENST00000558445 GCLCP48506 637 aaPredicted RBP11.36□□□□□ -0.59
TRPM1-207ENST00000558445 ATP1A2P50993 1020 aa11.36□□□□□ -0.59
TRPM1-207ENST00000558445 PDCLQ13371 301 aa11.36□□□□□ -0.59
TRPM1-207ENST00000558445 TAF11Q15544 211 aa11.36□□□□□ -0.59
TRPM1-207ENST00000558445 C1QTNF12Q5T7M4 302 aa11.36□□□□□ -0.59
TRPM1-207ENST00000558445 NUTM2GQ5VZR2 741 aa11.36□□□□□ -0.59
TRPM1-207ENST00000558445 NCAPG2Q86XI2 1143 aa11.36□□□□□ -0.59
TRPM1-207ENST00000558445 P3H4Q92791 437 aa11.36□□□□□ -0.59
TRPM1-207ENST00000558445 POLR3AO14802 1390 aaPredicted RBP11.36□□□□□ -0.59
TRPM1-207ENST00000558445 STXBP3O00186 592 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 CTCFP49711 727 aaPredicted RBP11.35□□□□□ -0.59
TRPM1-207ENST00000558445 NEXNQ0ZGT2 675 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 TMED1Q13445 227 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 CFAP58Q5T655 872 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 TRIM68Q6AZZ1 485 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 SND1Q7KZF4 910 aaKnown RBP eCLIP11.35□□□□□ -0.59
TRPM1-207ENST00000558445 MSANTD4Q8NCY6 345 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 CTNNBL1Q8WYA6 563 aaPredicted RBP11.35□□□□□ -0.59
TRPM1-207ENST00000558445 GDAP1L1Q96MZ0 367 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 PLEKHG4BQ96PX9 1271 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 OSBPL1AQ9BXW6 950 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 BIN1O00499 593 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 STX10O60499 249 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 FMNL1O95466 1100 aaPredicted RBP11.35□□□□□ -0.59
TRPM1-207ENST00000558445 MTHFSP49914 203 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 ARMCX5Q6P1M9 558 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 CLIC6Q96NY7 704 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 TESK2Q96S53 571 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 DACH1Q9UI36 760 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 Q4G0T1 1027 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 CNTROBQ8N137 903 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 CCDC155Q8N6L0 562 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 TEKT4Q8WW24 435 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 RAB21Q9UL25 225 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 DAPK1P53355 1430 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 MBD5Q9P267 1494 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 E2F6O75461 281 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 GNAI3P08754 354 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 PYGBP11216 843 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 PDE1AP54750 535 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 CCDC178Q5BJE1 867 aa11.35□□□□□ -0.59
TRPM1-207ENST00000558445 CACNA2D4Q7Z3S7 1137 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms