RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 LDHBP07195 334 aaKnown RBP15.15■□□□□ 0.02
SMAD3-205ENST00000558428 SPDYE6P0CI01 402 aa15.15■□□□□ 0.02
SMAD3-205ENST00000558428 PRDX5P30044 214 aa15.15■□□□□ 0.02
SMAD3-205ENST00000558428 MCAMP43121 646 aa15.15■□□□□ 0.02
SMAD3-205ENST00000558428 CRKP46108 304 aa15.15■□□□□ 0.02
SMAD3-205ENST00000558428 FMR1Q06787 632 aaKnown RBP eCLIP15.15■□□□□ 0.02
SMAD3-205ENST00000558428 PI16Q6UXB8 463 aa15.15■□□□□ 0.02
SMAD3-205ENST00000558428 USP48Q86UV5 1035 aa15.15■□□□□ 0.02
SMAD3-205ENST00000558428 SULF1Q8IWU6 871 aa15.15■□□□□ 0.02
SMAD3-205ENST00000558428 ZGPATQ8N5A5 531 aaKnown RBP15.15■□□□□ 0.02
SMAD3-205ENST00000558428 SPATA5Q8NB90 893 aa15.15■□□□□ 0.02
SMAD3-205ENST00000558428 LRRCC1Q9C099 1032 aa15.15■□□□□ 0.02
SMAD3-205ENST00000558428 HMG20BQ9P0W2 317 aa15.15■□□□□ 0.02
SMAD3-205ENST00000558428 PITPNM2Q9BZ72 1349 aa15.15■□□□□ 0.02
SMAD3-205ENST00000558428 MYH2Q9UKX2 1941 aa15.14■□□□□ 0.01
SMAD3-205ENST00000558428 ADM5C9JUS6 153 aa15.14■□□□□ 0.01
SMAD3-205ENST00000558428 MYO1BO43795 1136 aa15.14■□□□□ 0.01
SMAD3-205ENST00000558428 IFIT2P09913 472 aaKnown RBP15.14■□□□□ 0.01
SMAD3-205ENST00000558428 IRX6P78412 446 aaPredicted RBP15.14■□□□□ 0.01
SMAD3-205ENST00000558428 TEKT1Q969V4 418 aa15.14■□□□□ 0.01
SMAD3-205ENST00000558428 ABCF2Q9UG63 623 aa15.14■□□□□ 0.01
SMAD3-205ENST00000558428 SMARCA5O60264 1052 aaPredicted RBP15.13■□□□□ 0.01
SMAD3-205ENST00000558428 HTRA3P83110 453 aa15.13■□□□□ 0.01
SMAD3-205ENST00000558428 HDLBPQ00341 1268 aaKnown RBP15.13■□□□□ 0.01
SMAD3-205ENST00000558428 ZNF512BQ96KM6 892 aaPredicted RBP15.13■□□□□ 0.01
SMAD3-205ENST00000558428 PRMT6Q96LA8 375 aaPredicted RBP15.13■□□□□ 0.01
SMAD3-205ENST00000558428 SNRKQ9NRH2 765 aa15.13■□□□□ 0.01
SMAD3-205ENST00000558428 SCAF8Q9UPN6 1271 aaKnown RBP15.13■□□□□ 0.01
SMAD3-205ENST00000558428 CLRN2A0PK11 232 aa15.12■□□□□ 0.01
SMAD3-205ENST00000558428 TMEM88BA6NKF7 163 aa15.12■□□□□ 0.01
SMAD3-205ENST00000558428 SPTY2D1Q68D10 685 aaPredicted RBP15.12■□□□□ 0.01
SMAD3-205ENST00000558428 DLK2Q6UY11 383 aa15.12■□□□□ 0.01
SMAD3-205ENST00000558428 ERICH6Q7L0X2 663 aa15.12■□□□□ 0.01
SMAD3-205ENST00000558428 DZIP1Q86YF9 867 aaKnown RBP15.12■□□□□ 0.01
SMAD3-205ENST00000558428 APOBEC3FQ8IUX4 373 aaKnown RBP15.12■□□□□ 0.01
SMAD3-205ENST00000558428 MRIQ9BWK5 157 aa15.12■□□□□ 0.01
SMAD3-205ENST00000558428 ZNF408Q9H9D4 720 aa15.12■□□□□ 0.01
SMAD3-205ENST00000558428 CREBZFQ9NS37 354 aa15.12■□□□□ 0.01
SMAD3-205ENST00000558428 AOX1Q06278 1338 aa15.12■□□□□ 0.01
SMAD3-205ENST00000558428 MYO5AQ9Y4I1 1855 aaKnown RBP15.12■□□□□ 0.01
SMAD3-205ENST00000558428 CELF2O95319 508 aaKnown RBP15.11■□□□□ 0.01
SMAD3-205ENST00000558428 HDAC1Q13547 482 aaPredicted RBP15.11■□□□□ 0.01
SMAD3-205ENST00000558428 DIXDC1Q155Q3 683 aa15.11■□□□□ 0.01
SMAD3-205ENST00000558428 HHIPL2Q6UWX4 724 aa15.11■□□□□ 0.01
SMAD3-205ENST00000558428 TBC1D9Q6ZT07 1266 aa15.11■□□□□ 0.01
SMAD3-205ENST00000558428 ZDHHC15Q96MV8 337 aa15.11■□□□□ 0.01
SMAD3-205ENST00000558428 TDRD3Q9H7E2 651 aaKnown RBP15.11■□□□□ 0.01
SMAD3-205ENST00000558428 VEZTQ9HBM0 779 aa15.11■□□□□ 0.01
SMAD3-205ENST00000558428 ZAP70P43403 619 aa15.1■□□□□ 0.01
SMAD3-205ENST00000558428 SPDYE2Q495Y8 402 aa15.1■□□□□ 0.01
SMAD3-205ENST00000558428 CST9Q5W186 159 aa15.1■□□□□ 0.01
SMAD3-205ENST00000558428 CDCA5Q96FF9 252 aa15.1■□□□□ 0.01
SMAD3-205ENST00000558428 LRP2BPQ9P2M1 347 aa15.1■□□□□ 0.01
SMAD3-205ENST00000558428 ZNF70Q9UC06 446 aaPredicted RBP15.1■□□□□ 0.01
SMAD3-205ENST00000558428 CYP2E1P05181 493 aaPredicted RBP15.09■□□□□ 0.01
SMAD3-205ENST00000558428 SLF2Q8IX21 1173 aa15.09■□□□□ 0.01
SMAD3-205ENST00000558428 RAI14Q9P0K7 980 aa15.09■□□□□ 0.01
SMAD3-205ENST00000558428 DAGLAQ9Y4D2 1042 aa15.09■□□□□ 0.01
SMAD3-205ENST00000558428 MECOMQ03112 1051 aa15.08■□□□□ 0
SMAD3-205ENST00000558428 PRAMEF18Q5VWM3 479 aa15.08■□□□□ 0
SMAD3-205ENST00000558428 APOBEC3HQ6NTF7 200 aaKnown RBP15.08■□□□□ 0
SMAD3-205ENST00000558428 GCC1Q96CN9 775 aa15.08■□□□□ 0
SMAD3-205ENST00000558428 DEFB129Q9H1M3 183 aa15.08■□□□□ 0
SMAD3-205ENST00000558428 RWDD1Q9H446 243 aaPredicted RBP15.08■□□□□ 0
SMAD3-205ENST00000558428 TMOD2Q9NZR1 351 aa15.08■□□□□ 0
SMAD3-205ENST00000558428 ABT1Q9ULW3 272 aaKnown RBP15.08■□□□□ 0
SMAD3-205ENST00000558428 NDUFB9Q9Y6M9 179 aa15.08■□□□□ 0
SMAD3-205ENST00000558428 MAST2Q6P0Q8 1798 aa15.07■□□□□ 0
SMAD3-205ENST00000558428 TCP10L2B9ZVM9 353 aa15.07■□□□□ 0
SMAD3-205ENST00000558428 TNFAIP1Q13829 316 aa15.07■□□□□ 0
SMAD3-205ENST00000558428 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.07■□□□□ 0
SMAD3-205ENST00000558428 NSUN4Q96CB9 384 aaKnown RBP15.07■□□□□ 0
SMAD3-205ENST00000558428 PIH1D3Q9NQM4 214 aaKnown RBP15.07■□□□□ 0
SMAD3-205ENST00000558428 ZBTB47Q9UFB7 747 aaPredicted RBP15.07■□□□□ 0
SMAD3-205ENST00000558428 GAKO14976 1311 aa15.07■□□□□ 0
SMAD3-205ENST00000558428 CACNB3P54284 484 aa15.06■□□□□ 0
SMAD3-205ENST00000558428 GSTO1P78417 241 aa15.06■□□□□ 0
SMAD3-205ENST00000558428 ANKRD45Q5TZF3 282 aa15.06■□□□□ 0
SMAD3-205ENST00000558428 ZNF384Q8TF68 577 aa15.06■□□□□ 0
SMAD3-205ENST00000558428 DNAJC2Q99543 621 aaKnown RBP15.06■□□□□ 0
SMAD3-205ENST00000558428 GBA2Q9HCG7 927 aaPredicted RBP15.06■□□□□ 0
SMAD3-205ENST00000558428 PPP2R3BQ9Y5P8 575 aa15.06■□□□□ 0
SMAD3-205ENST00000558428 MROH7-TTC4A0A0A0MT08 1334 aa15.06■□□□□ 0
SMAD3-205ENST00000558428 DOCK2Q92608 1830 aa15.06■□□□□ 0
SMAD3-205ENST00000558428 AK9Q5TCS8 1911 aa15.05■□□□□ 0
SMAD3-205ENST00000558428 IDH1O75874 414 aaKnown RBP15.05■□□□□ -0
SMAD3-205ENST00000558428 LDHCP07864 332 aa15.05■□□□□ -0
SMAD3-205ENST00000558428 ATP5JP18859 108 aa15.05■□□□□ -0
SMAD3-205ENST00000558428 NF2P35240 595 aa15.05■□□□□ -0
SMAD3-205ENST00000558428 TNNI2P48788 182 aa15.05■□□□□ -0
SMAD3-205ENST00000558428 RASA3Q14644 834 aa15.05■□□□□ -0
SMAD3-205ENST00000558428 NAA16Q6N069 864 aaPredicted RBP15.05■□□□□ -0
SMAD3-205ENST00000558428 CDC42EP5Q6NZY7 148 aa15.05■□□□□ -0
SMAD3-205ENST00000558428 C2orf69Q8N8R5 385 aa15.05■□□□□ -0
SMAD3-205ENST00000558428 FAM163AQ96GL9 167 aaPredicted RBP15.05■□□□□ -0
SMAD3-205ENST00000558428 GPATCH3Q96I76 525 aa15.05■□□□□ -0
SMAD3-205ENST00000558428 BOLA2Q9H3K6 86 aa15.05■□□□□ -0
SMAD3-205ENST00000558428 ANTXR1Q9H6X2 564 aa15.05■□□□□ -0
SMAD3-205ENST00000558428 USP40Q9NVE5 1235 aa15.05■□□□□ -0
SMAD3-205ENST00000558428 MKRN1Q9UHC7 482 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms