RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 ERC1Q8IUD2 1116 aa10.46□□□□□ -0.73
TPM1-213ENST00000558400 APOBEC3FQ8IUX4 373 aaKnown RBP10.46□□□□□ -0.73
TPM1-213ENST00000558400 ZGPATQ8N5A5 531 aaKnown RBP10.46□□□□□ -0.73
TPM1-213ENST00000558400 C2orf69Q8N8R5 385 aa10.46□□□□□ -0.73
TPM1-213ENST00000558400 ZBED3Q96IU2 234 aaPredicted RBP10.46□□□□□ -0.73
TPM1-213ENST00000558400 YTHDC1Q96MU7 727 aaKnown RBP10.46□□□□□ -0.73
TPM1-213ENST00000558400 NEUROD6Q96NK8 337 aa10.46□□□□□ -0.73
TPM1-213ENST00000558400 GGA3Q9NZ52 723 aa10.46□□□□□ -0.73
TPM1-213ENST00000558400 ABT1Q9ULW3 272 aaKnown RBP10.46□□□□□ -0.73
TPM1-213ENST00000558400 TTF2Q9UNY4 1162 aaKnown RBP10.46□□□□□ -0.73
TPM1-213ENST00000558400 MAST3O60307 1309 aa10.46□□□□□ -0.73
TPM1-213ENST00000558400 SCN9AQ15858 1988 aa10.46□□□□□ -0.74
TPM1-213ENST00000558400 F8W031 263 aaPredicted RBP10.45□□□□□ -0.74
TPM1-213ENST00000558400 ECE1P42892 770 aa10.45□□□□□ -0.74
TPM1-213ENST00000558400 CHAF1AQ13111 956 aaPredicted RBP10.45□□□□□ -0.74
TPM1-213ENST00000558400 CFAP100Q494V2 611 aa10.45□□□□□ -0.74
TPM1-213ENST00000558400 CCDC102BQ68D86 513 aa10.45□□□□□ -0.74
TPM1-213ENST00000558400 CEP85Q6P2H3 762 aa10.45□□□□□ -0.74
TPM1-213ENST00000558400 REM2Q8IYK8 340 aaPredicted RBP10.45□□□□□ -0.74
TPM1-213ENST00000558400 XAGE2Q96GT9 111 aa10.45□□□□□ -0.74
TPM1-213ENST00000558400 HHIPL1Q96JK4 782 aa10.45□□□□□ -0.74
TPM1-213ENST00000558400 C1orf115Q9H7X2 142 aa10.45□□□□□ -0.74
TPM1-213ENST00000558400 IQSEC3Q9UPP2 1182 aaPredicted RBP10.45□□□□□ -0.74
TPM1-213ENST00000558400 SPEF2Q9C093 1822 aa10.44□□□□□ -0.74
TPM1-213ENST00000558400 SPDYE2BA6NHP3 402 aa10.44□□□□□ -0.74
TPM1-213ENST00000558400 UQCRFS1P1P0C7P4 283 aa10.44□□□□□ -0.74
TPM1-213ENST00000558400 SPDYE6P0CI01 402 aa10.44□□□□□ -0.74
TPM1-213ENST00000558400 NF2P35240 595 aa10.44□□□□□ -0.74
TPM1-213ENST00000558400 FKBP1BP68106 108 aa10.44□□□□□ -0.74
TPM1-213ENST00000558400 MKRN4PQ13434 485 aaPredicted RBP10.44□□□□□ -0.74
TPM1-213ENST00000558400 CCDC158Q5M9N0 1113 aa10.44□□□□□ -0.74
TPM1-213ENST00000558400 SPTY2D1Q68D10 685 aaPredicted RBP10.44□□□□□ -0.74
TPM1-213ENST00000558400 HHIPL2Q6UWX4 724 aa10.44□□□□□ -0.74
TPM1-213ENST00000558400 TEKT1Q969V4 418 aa10.44□□□□□ -0.74
TPM1-213ENST00000558400 PRMT6Q96LA8 375 aaPredicted RBP10.44□□□□□ -0.74
TPM1-213ENST00000558400 BEGAINQ9BUH8 593 aa10.44□□□□□ -0.74
TPM1-213ENST00000558400 JAG2Q9Y219 1238 aa10.44□□□□□ -0.74
TPM1-213ENST00000558400 TLL2Q9Y6L7 1015 aa10.44□□□□□ -0.74
TPM1-213ENST00000558400 PDS5AQ29RF7 1337 aaKnown RBP10.43□□□□□ -0.74
TPM1-213ENST00000558400 SALL1Q9NSC2 1324 aa10.43□□□□□ -0.74
TPM1-213ENST00000558400 IGSF3O75054 1194 aa10.43□□□□□ -0.74
TPM1-213ENST00000558400 PHKA1P46020 1223 aa10.43□□□□□ -0.74
TPM1-213ENST00000558400 CRKP46108 304 aa10.43□□□□□ -0.74
TPM1-213ENST00000558400 TNFAIP1Q13829 316 aa10.43□□□□□ -0.74
TPM1-213ENST00000558400 SAPCD2Q86UD0 394 aa10.43□□□□□ -0.74
TPM1-213ENST00000558400 SLF2Q8IX21 1173 aa10.43□□□□□ -0.74
TPM1-213ENST00000558400 MCOLN1Q9GZU1 580 aa10.43□□□□□ -0.74
TPM1-213ENST00000558400 ZNF408Q9H9D4 720 aa10.43□□□□□ -0.74
TPM1-213ENST00000558400 GBA2Q9HCG7 927 aaPredicted RBP10.43□□□□□ -0.74
TPM1-213ENST00000558400 PPP2R3BQ9Y5P8 575 aa10.43□□□□□ -0.74
TPM1-213ENST00000558400 ASTN2O75129 1339 aaPredicted RBP10.42□□□□□ -0.74
TPM1-213ENST00000558400 ADM5C9JUS6 153 aa10.42□□□□□ -0.74
TPM1-213ENST00000558400 RAB11FIP3O75154 756 aa10.42□□□□□ -0.74
TPM1-213ENST00000558400 LDHBP07195 334 aaKnown RBP10.42□□□□□ -0.74
TPM1-213ENST00000558400 TNNI2P48788 182 aa10.42□□□□□ -0.74
TPM1-213ENST00000558400 FMR1Q06787 632 aaKnown RBP eCLIP10.42□□□□□ -0.74
TPM1-213ENST00000558400 SUPT20HL1Q3ZLR7 823 aa10.42□□□□□ -0.74
TPM1-213ENST00000558400 TNNI3KQ59H18 835 aa10.42□□□□□ -0.74
TPM1-213ENST00000558400 PRPF38BQ5VTL8 546 aaKnown RBP10.42□□□□□ -0.74
TPM1-213ENST00000558400 CDCA5Q96FF9 252 aa10.42□□□□□ -0.74
TPM1-213ENST00000558400 ZDHHC15Q96MV8 337 aa10.42□□□□□ -0.74
TPM1-213ENST00000558400 DEFB129Q9H1M3 183 aa10.42□□□□□ -0.74
TPM1-213ENST00000558400 FPGT-TNNI3KV9GXZ4 949 aa10.42□□□□□ -0.74
TPM1-213ENST00000558400 PSME4Q14997 1843 aa10.42□□□□□ -0.74
TPM1-213ENST00000558400 ADORA1P30542 326 aa10.41□□□□□ -0.74
TPM1-213ENST00000558400 MAP2K2P36507 400 aa10.41□□□□□ -0.74
TPM1-213ENST00000558400 HUNKP57058 714 aa10.41□□□□□ -0.74
TPM1-213ENST00000558400 AAMPQ13685 434 aa10.41□□□□□ -0.74
TPM1-213ENST00000558400 C20orf194Q5TEA3 1177 aa10.41□□□□□ -0.74
TPM1-213ENST00000558400 FKBP1CQ5VVH2 108 aa10.41□□□□□ -0.74
TPM1-213ENST00000558400 CCDC102AQ96A19 550 aa10.41□□□□□ -0.74
TPM1-213ENST00000558400 KIF1BPQ96EK5 621 aa10.41□□□□□ -0.74
TPM1-213ENST00000558400 ZNF512BQ96KM6 892 aaPredicted RBP10.41□□□□□ -0.74
TPM1-213ENST00000558400 CAPNS2Q96L46 248 aa10.41□□□□□ -0.74
TPM1-213ENST00000558400 TMOD2Q9NZR1 351 aa10.41□□□□□ -0.74
TPM1-213ENST00000558400 UNCXA6NJT0 531 aa10.4□□□□□ -0.74
TPM1-213ENST00000558400 PPP1R12BO60237 982 aaPredicted RBP10.4□□□□□ -0.74
TPM1-213ENST00000558400 LDHCP07864 332 aa10.4□□□□□ -0.74
TPM1-213ENST00000558400 ARID4AP29374 1257 aaPredicted RBP10.4□□□□□ -0.74
TPM1-213ENST00000558400 RRP1P56182 461 aaKnown RBP10.4□□□□□ -0.74
TPM1-213ENST00000558400 RASGRF1Q13972 1273 aa10.4□□□□□ -0.74
TPM1-213ENST00000558400 SPDYE2Q495Y8 402 aa10.4□□□□□ -0.74
TPM1-213ENST00000558400 TTC39AQ5SRH9 613 aa10.4□□□□□ -0.74
TPM1-213ENST00000558400 PAXIP1Q6ZW49 1069 aaPredicted RBP10.4□□□□□ -0.74
TPM1-213ENST00000558400 ERICH6Q7L0X2 663 aa10.4□□□□□ -0.74
TPM1-213ENST00000558400 ARMC9Q7Z3E5 817 aa10.4□□□□□ -0.74
TPM1-213ENST00000558400 CLASRPQ8N2M8 674 aaKnown RBP10.4□□□□□ -0.74
TPM1-213ENST00000558400 SPATA5Q8NB90 893 aa10.4□□□□□ -0.74
TPM1-213ENST00000558400 RHPN1Q8TCX5 695 aa10.4□□□□□ -0.74
TPM1-213ENST00000558400 FAM163AQ96GL9 167 aaPredicted RBP10.4□□□□□ -0.74
TPM1-213ENST00000558400 TDRD3Q9H7E2 651 aaKnown RBP10.4□□□□□ -0.74
TPM1-213ENST00000558400 VEZTQ9HBM0 779 aa10.4□□□□□ -0.74
TPM1-213ENST00000558400 ZNF70Q9UC06 446 aaPredicted RBP10.4□□□□□ -0.74
TPM1-213ENST00000558400 ABCF2Q9UG63 623 aa10.4□□□□□ -0.74
TPM1-213ENST00000558400 TSKSQ9UJT2 592 aa10.4□□□□□ -0.74
TPM1-213ENST00000558400 CLRN2A0PK11 232 aa10.39□□□□□ -0.75
TPM1-213ENST00000558400 GSTO1P78417 241 aa10.39□□□□□ -0.75
TPM1-213ENST00000558400 RASA3Q14644 834 aa10.39□□□□□ -0.75
TPM1-213ENST00000558400 GRIK5Q16478 980 aa10.39□□□□□ -0.75
TPM1-213ENST00000558400 APOBEC3HQ6NTF7 200 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms