RNA–Protein interactions for RNA: ENST00000558339.1

SPG21-205, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-205ENST00000558339 SSH1Q8WYL5 1049 aa27.77■■■□□ 2.04
SPG21-205ENST00000558339 PTPRCP08575 1304 aa27.76■■■□□ 2.03
SPG21-205ENST00000558339 TNFAIP1Q13829 316 aa27.76■■■□□ 2.03
SPG21-205ENST00000558339 METTL24Q5JXM2 366 aa27.76■■■□□ 2.03
SPG21-205ENST00000558339 ANKRD13AQ8IZ07 590 aa27.76■■■□□ 2.03
SPG21-205ENST00000558339 KLHDC4Q8TBB5 520 aa27.76■■■□□ 2.03
SPG21-205ENST00000558339 PDE4DIPQ5VU43 2346 aa27.75■■■□□ 2.03
SPG21-205ENST00000558339 USP44Q9H0E7 712 aa27.75■■■□□ 2.03
SPG21-205ENST00000558339 TCP10L2B9ZVM9 353 aa27.74■■■□□ 2.03
SPG21-205ENST00000558339 PDE8BO95263 885 aa27.74■■■□□ 2.03
SPG21-205ENST00000558339 CHAF1AQ13111 956 aaPredicted RBP27.74■■■□□ 2.03
SPG21-205ENST00000558339 PTPN18Q99952 460 aa27.74■■■□□ 2.03
SPG21-205ENST00000558339 TMEM39BQ9GZU3 492 aa27.74■■■□□ 2.03
SPG21-205ENST00000558339 OTOFQ9HC10 1997 aa27.73■■■□□ 2.03
SPG21-205ENST00000558339 TESPA1A2RU30 521 aaPredicted RBP27.73■■■□□ 2.03
SPG21-205ENST00000558339 VPS37DQ86XT2 251 aa27.73■■■□□ 2.03
SPG21-205ENST00000558339 ELP3Q9H9T3 547 aa27.73■■■□□ 2.03
SPG21-205ENST00000558339 E9PSI1 815 aa27.72■■■□□ 2.03
SPG21-205ENST00000558339 BCAMP50895 628 aa27.72■■■□□ 2.03
SPG21-205ENST00000558339 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.72■■■□□ 2.03
SPG21-205ENST00000558339 CNKSR2Q8WXI2 1034 aa27.71■■■□□ 2.03
SPG21-205ENST00000558339 OPTNQ96CV9 577 aa27.71■■■□□ 2.03
SPG21-205ENST00000558339 FGFR2P21802 821 aa27.7■■■□□ 2.02
SPG21-205ENST00000558339 HDLBPQ00341 1268 aaKnown RBP27.7■■■□□ 2.02
SPG21-205ENST00000558339 SLFN5Q08AF3 891 aa27.7■■■□□ 2.02
SPG21-205ENST00000558339 CRHR2Q13324 411 aa27.7■■■□□ 2.02
SPG21-205ENST00000558339 CAVIN4Q5BKX8 364 aa27.7■■■□□ 2.02
SPG21-205ENST00000558339 OTOP1Q7RTM1 612 aa27.7■■■□□ 2.02
SPG21-205ENST00000558339 TBC1D22AQ8WUA7 517 aa27.7■■■□□ 2.02
SPG21-205ENST00000558339 MS4A4AQ96JQ5 239 aa27.7■■■□□ 2.02
SPG21-205ENST00000558339 TRIM17Q9Y577 477 aa27.7■■■□□ 2.02
SPG21-205ENST00000558339 RFX5P48382 616 aaPredicted RBP27.69■■■□□ 2.02
SPG21-205ENST00000558339 CACNB3P54284 484 aa27.69■■■□□ 2.02
SPG21-205ENST00000558339 FRAT2O75474 233 aaPredicted RBP27.68■■■□□ 2.02
SPG21-205ENST00000558339 VGLL4Q14135 290 aa27.68■■■□□ 2.02
SPG21-205ENST00000558339 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.68■■■□□ 2.02
SPG21-205ENST00000558339 TNNI2P48788 182 aa27.67■■■□□ 2.02
SPG21-205ENST00000558339 CAP1Q01518 475 aa27.67■■■□□ 2.02
SPG21-205ENST00000558339 TEKT1Q969V4 418 aa27.67■■■□□ 2.02
SPG21-205ENST00000558339 KIF16BQ96L93 1317 aa27.67■■■□□ 2.02
SPG21-205ENST00000558339 MAP3K9P80192 1104 aa27.66■■■□□ 2.02
SPG21-205ENST00000558339 PUM3Q15397 648 aaKnown RBP27.66■■■□□ 2.02
SPG21-205ENST00000558339 OTUD7BQ6GQQ9 843 aa27.66■■■□□ 2.02
SPG21-205ENST00000558339 APOBEC3HQ6NTF7 200 aaKnown RBP27.66■■■□□ 2.02
SPG21-205ENST00000558339 CD99L2Q8TCZ2 262 aa27.66■■■□□ 2.02
SPG21-205ENST00000558339 BRI3BPQ8WY22 251 aa27.66■■■□□ 2.02
SPG21-205ENST00000558339 CDCA7LQ96GN5 454 aa27.66■■■□□ 2.02
SPG21-205ENST00000558339 ZDHHC15Q96MV8 337 aa27.66■■■□□ 2.02
SPG21-205ENST00000558339 MRIQ9BWK5 157 aa27.65■■■□□ 2.02
SPG21-205ENST00000558339 EYA2O00167 538 aa27.64■■■□□ 2.02
SPG21-205ENST00000558339 ALDH1L2Q3SY69 923 aa27.64■■■□□ 2.02
SPG21-205ENST00000558339 ERO1AQ96HE7 468 aa27.64■■■□□ 2.02
SPG21-205ENST00000558339 CENPFP49454 3210 aa27.63■■■□□ 2.01
SPG21-205ENST00000558339 IFIT1P09914 478 aaKnown RBP27.63■■■□□ 2.01
SPG21-205ENST00000558339 ATG9AQ7Z3C6 839 aa27.63■■■□□ 2.01
SPG21-205ENST00000558339 PRPF38BQ5VTL8 546 aaKnown RBP27.62■■■□□ 2.01
SPG21-205ENST00000558339 PTPN22Q9Y2R2 807 aa27.62■■■□□ 2.01
SPG21-205ENST00000558339 SUGT1Q9Y2Z0 365 aa27.62■■■□□ 2.01
SPG21-205ENST00000558339 CCL15-CCL14A0A0B4J2E2 113 aa27.61■■■□□ 2.01
SPG21-205ENST00000558339 SP3Q02447 781 aa27.61■■■□□ 2.01
SPG21-205ENST00000558339 CCL15Q16663 113 aa27.61■■■□□ 2.01
SPG21-205ENST00000558339 FAM83AQ86UY5 434 aa27.61■■■□□ 2.01
SPG21-205ENST00000558339 TRMT2AQ8IZ69 625 aaKnown RBP27.61■■■□□ 2.01
SPG21-205ENST00000558339 OTUD5Q96G74 571 aa27.61■■■□□ 2.01
SPG21-205ENST00000558339 SMC4Q9NTJ3 1288 aa27.61■■■□□ 2.01
SPG21-205ENST00000558339 SNCAIPQ9Y6H5 919 aa27.61■■■□□ 2.01
SPG21-205ENST00000558339 FKBP1CQ5VVH2 108 aa27.6■■■□□ 2.01
SPG21-205ENST00000558339 HHIPL2Q6UWX4 724 aa27.6■■■□□ 2.01
SPG21-205ENST00000558339 LPIN2Q92539 896 aa27.6■■■□□ 2.01
SPG21-205ENST00000558339 CSADQ9Y600 493 aa27.6■■■□□ 2.01
SPG21-205ENST00000558339 MKI67P46013 3256 aaKnown RBP27.59■■■□□ 2.01
SPG21-205ENST00000558339 SPDYE5A6NIY4 337 aa27.59■■■□□ 2.01
SPG21-205ENST00000558339 SLC5A1P13866 664 aa27.59■■■□□ 2.01
SPG21-205ENST00000558339 GTF2A2P52657 109 aa27.59■■■□□ 2.01
SPG21-205ENST00000558339 FAM43AQ8N2R8 423 aa27.59■■■□□ 2.01
SPG21-205ENST00000558339 EFCC1Q9HA90 598 aa27.59■■■□□ 2.01
SPG21-205ENST00000558339 MAST3O60307 1309 aa27.59■■■□□ 2.01
SPG21-205ENST00000558339 POTEFA5A3E0 1075 aa27.58■■■□□ 2.01
SPG21-205ENST00000558339 TMOD2Q9NZR1 351 aa27.58■■■□□ 2.01
SPG21-205ENST00000558339 TAF1CQ15572 869 aaPredicted RBP27.57■■■□□ 2
SPG21-205ENST00000558339 WDR66Q8TBY9 1149 aa27.57■■■□□ 2
SPG21-205ENST00000558339 ZKSCAN4Q969J2 545 aaPredicted RBP27.57■■■□□ 2
SPG21-205ENST00000558339 WRNIP1Q96S55 665 aa27.57■■■□□ 2
SPG21-205ENST00000558339 RPAP1Q9BWH6 1393 aaPredicted RBP27.57■■■□□ 2
SPG21-205ENST00000558339 BRCA2P51587 3418 aa27.57■■■□□ 2
SPG21-205ENST00000558339 SIL1Q9H173 461 aa27.56■■■□□ 2
SPG21-205ENST00000558339 INTS3Q68E01 1043 aaKnown RBP27.55■■■□□ 2
SPG21-205ENST00000558339 ERO1BQ86YB8 467 aa27.55■■■□□ 2
SPG21-205ENST00000558339 ARMC5Q96C12 935 aa27.55■■■□□ 2
SPG21-205ENST00000558339 ZFYVE28Q9HCC9 887 aa27.55■■■□□ 2
SPG21-205ENST00000558339 DAGLAQ9Y4D2 1042 aa27.55■■■□□ 2
SPG21-205ENST00000558339 UBTFL1P0CB47 393 aaPredicted RBP27.54■■■□□ 2
SPG21-205ENST00000558339 DIXDC1Q155Q3 683 aa27.54■■■□□ 2
SPG21-205ENST00000558339 NOB1Q9ULX3 412 aaKnown RBP27.54■■■□□ 2
SPG21-205ENST00000558339 IRF6O14896 467 aa27.53■■■□□ 2
SPG21-205ENST00000558339 CIAO1O76071 339 aa27.53■■■□□ 2
SPG21-205ENST00000558339 PRDX5P30044 214 aa27.53■■■□□ 2
SPG21-205ENST00000558339 ATP2B3Q16720 1220 aa27.53■■■□□ 2
SPG21-205ENST00000558339 FBXO3Q9UK99 471 aa27.53■■■□□ 2
SPG21-205ENST00000558339 CDC42EP5Q6NZY7 148 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms