RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 PHKG2P15735 406 aa6.33□□□□□ -1.4
GABPB1-207ENST00000558335 ATF3P18847 181 aa6.33□□□□□ -1.4
GABPB1-207ENST00000558335 CYP2C19P33261 490 aa6.33□□□□□ -1.4
GABPB1-207ENST00000558335 MAP2K2P36507 400 aa6.33□□□□□ -1.4
GABPB1-207ENST00000558335 PEX19P40855 299 aa6.33□□□□□ -1.4
GABPB1-207ENST00000558335 CEBPAP49715 358 aaPredicted RBP6.33□□□□□ -1.4
GABPB1-207ENST00000558335 EVCP57679 992 aa6.33□□□□□ -1.4
GABPB1-207ENST00000558335 CABP4P57796 275 aa6.33□□□□□ -1.4
GABPB1-207ENST00000558335 TOB2Q14106 344 aaPredicted RBP6.33□□□□□ -1.4
GABPB1-207ENST00000558335 CWF19L2Q2TBE0 894 aaKnown RBP6.33□□□□□ -1.4
GABPB1-207ENST00000558335 ADCK5Q3MIX3 580 aa6.33□□□□□ -1.4
GABPB1-207ENST00000558335 ANO6Q4KMQ2 910 aa6.33□□□□□ -1.4
GABPB1-207ENST00000558335 ZC3H12AQ5D1E8 599 aaKnown RBP6.33□□□□□ -1.4
GABPB1-207ENST00000558335 ADALQ6DHV7 355 aa6.33□□□□□ -1.4
GABPB1-207ENST00000558335 SYNE3Q6ZMZ3 975 aa6.33□□□□□ -1.4
GABPB1-207ENST00000558335 Q6ZUG5 572 aa6.33□□□□□ -1.4
GABPB1-207ENST00000558335 COPS6Q7L5N1 327 aa6.33□□□□□ -1.4
GABPB1-207ENST00000558335 ELOA2Q8IYF1 753 aaPredicted RBP6.33□□□□□ -1.4
GABPB1-207ENST00000558335 FAM177A1Q8N128 213 aaPredicted RBP6.33□□□□□ -1.4
GABPB1-207ENST00000558335 LSM14AQ8ND56 463 aaKnown RBP6.33□□□□□ -1.4
GABPB1-207ENST00000558335 ANKRD20A12PQ8NF67 263 aa6.33□□□□□ -1.4
GABPB1-207ENST00000558335 XAGE3Q8WTP9 111 aa6.33□□□□□ -1.4
GABPB1-207ENST00000558335 MRPS27Q92552 414 aaKnown RBP6.33□□□□□ -1.4
GABPB1-207ENST00000558335 MYD88Q99836 296 aa6.33□□□□□ -1.4
GABPB1-207ENST00000558335 MTA3Q9BTC8 594 aa6.33□□□□□ -1.4
GABPB1-207ENST00000558335 SRRTQ9BXP5 876 aaKnown RBP6.33□□□□□ -1.4
GABPB1-207ENST00000558335 FAM107BQ9H098 131 aa6.33□□□□□ -1.4
GABPB1-207ENST00000558335 CCDC8Q9H0W5 538 aaPredicted RBP6.33□□□□□ -1.4
GABPB1-207ENST00000558335 CBX8Q9HC52 389 aa6.33□□□□□ -1.4
GABPB1-207ENST00000558335 PAG1Q9NWQ8 432 aa6.33□□□□□ -1.4
GABPB1-207ENST00000558335 CLIP2Q9UDT6 1046 aa6.33□□□□□ -1.4
GABPB1-207ENST00000558335 DACH1Q9UI36 760 aa6.33□□□□□ -1.4
GABPB1-207ENST00000558335 C5P01031 1676 aa6.33□□□□□ -1.4
GABPB1-207ENST00000558335 MAP3K15Q6ZN16 1313 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 PCDH11XQ9BZA7 1347 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 PCDH11YQ9BZA8 1340 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 A0A087WZG4 1122 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 A0A0D9SFI3 127 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 H7C1W4 665 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 PES1O00541 588 aaKnown RBP6.32□□□□□ -1.4
GABPB1-207ENST00000558335 CPLX1O14810 134 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 IGKV5-2P06315 115 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 CSB-PGBD3P0DP91 1061 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 MAGEA8P43361 318 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 NT5C2P49902 561 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 PTPN12Q05209 780 aaKnown RBP6.32□□□□□ -1.4
GABPB1-207ENST00000558335 AIMP1Q12904 312 aaKnown RBP6.32□□□□□ -1.4
GABPB1-207ENST00000558335 RESTQ13127 1097 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 TRIM28Q13263 835 aaKnown RBP6.32□□□□□ -1.4
GABPB1-207ENST00000558335 TRIM29Q14134 588 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 PDIA6Q15084 440 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 PPP2R5BQ15173 497 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 TPD52L1Q16890 204 aaPredicted RBP6.32□□□□□ -1.4
GABPB1-207ENST00000558335 FOXD4L6Q3SYB3 417 aaPredicted RBP6.32□□□□□ -1.4
GABPB1-207ENST00000558335 ZMYM1Q5SVZ6 1142 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 GORABQ5T7V8 394 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 MCTP2Q6DN12 878 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 FOXD4L3Q6VB84 417 aaPredicted RBP6.32□□□□□ -1.4
GABPB1-207ENST00000558335 CDC37L1Q7L3B6 337 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 ARMCX6Q7L4S7 300 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 RALYLQ86SE5 291 aaKnown RBP6.32□□□□□ -1.4
GABPB1-207ENST00000558335 FCHSD1Q86WN1 690 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 ZNF710Q8N1W2 664 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 KIF18AQ8NI77 898 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 PPM1EQ8WY54 764 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 BRF1Q92994 677 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 FAM227BQ96M60 508 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 SDF4Q9BRK5 362 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 POLR3EQ9NVU0 708 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 RTEL1Q9NZ71 1219 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 ABCF2Q9UG63 623 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 ADAMTSL3P82987 1691 aa6.32□□□□□ -1.4
GABPB1-207ENST00000558335 UBR2Q8IWV8 1755 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 MYH7P12883 1935 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 C1orf167Q5SNV9 1468 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 PXDNQ92626 1479 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 PSDA5PKW4 1024 aaPredicted RBP6.31□□□□□ -1.4
GABPB1-207ENST00000558335 EYA2O00167 538 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 IKBKBO14920 756 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 GABBR2O75899 941 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 IVLP07476 585 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 IFIT1P09914 478 aaKnown RBP6.31□□□□□ -1.4
GABPB1-207ENST00000558335 MAGEA9P43362 315 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 ME1P48163 572 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 RCAN1P53805 252 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 RAD51AP2Q09MP3 1159 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 TFCP2Q12800 502 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 STK38Q15208 465 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 PTPN14Q15678 1187 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 PDCD2Q16342 344 aaPredicted RBP6.31□□□□□ -1.4
GABPB1-207ENST00000558335 ZSCAN26Q16670 478 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 CCDC57Q2TAC2 916 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 SLFNL1Q499Z3 407 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 TTC31Q49AM3 519 aaPredicted RBP6.31□□□□□ -1.4
GABPB1-207ENST00000558335 KANK3Q6NY19 840 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 CADPS2Q86UW7 1296 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 PROSER2Q86WR7 435 aaPredicted RBP6.31□□□□□ -1.4
GABPB1-207ENST00000558335 CCAR1Q8IX12 1150 aaKnown RBP6.31□□□□□ -1.4
GABPB1-207ENST00000558335 NECAB1Q8N987 351 aa6.31□□□□□ -1.4
GABPB1-207ENST00000558335 NCOA7Q8NI08 942 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms