RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 FOXO3O43524 673 aa8.84□□□□□ -0.99
MARK3-212ENST00000558223 NPHP4O75161 1426 aaPredicted RBP8.84□□□□□ -0.99
MARK3-212ENST00000558223 FGRP09769 529 aa8.84□□□□□ -0.99
MARK3-212ENST00000558223 USP4Q13107 963 aa8.84□□□□□ -0.99
MARK3-212ENST00000558223 PTPRNQ16849 979 aa8.84□□□□□ -0.99
MARK3-212ENST00000558223 PLEKHG6Q3KR16 790 aa8.84□□□□□ -0.99
MARK3-212ENST00000558223 INTS3Q68E01 1043 aaKnown RBP8.84□□□□□ -0.99
MARK3-212ENST00000558223 TRIM67Q6ZTA4 783 aa8.84□□□□□ -0.99
MARK3-212ENST00000558223 CCAR1Q8IX12 1150 aaKnown RBP8.84□□□□□ -0.99
MARK3-212ENST00000558223 RPAP2Q8IXW5 612 aaPredicted RBP8.84□□□□□ -0.99
MARK3-212ENST00000558223 TMEM57Q8N5G2 664 aa8.84□□□□□ -0.99
MARK3-212ENST00000558223 CRELD1Q96HD1 420 aa8.84□□□□□ -0.99
MARK3-212ENST00000558223 SETDB2Q96T68 719 aa8.84□□□□□ -0.99
MARK3-212ENST00000558223 USB1Q9BQ65 265 aaKnown RBP8.84□□□□□ -0.99
MARK3-212ENST00000558223 ARHGAP9Q9BRR9 750 aa8.84□□□□□ -0.99
MARK3-212ENST00000558223 ADGRL3Q9HAR2 1447 aa8.84□□□□□ -0.99
MARK3-212ENST00000558223 CCDC87Q9NVE4 849 aa8.84□□□□□ -0.99
MARK3-212ENST00000558223 SLC27A5Q9Y2P5 690 aa8.84□□□□□ -0.99
MARK3-212ENST00000558223 USP54Q70EL1 1684 aa8.84□□□□□ -0.99
MARK3-212ENST00000558223 PLEKHG2Q9H7P9 1386 aa8.84□□□□□ -0.99
MARK3-212ENST00000558223 PNMA6FA0A0J9YX94 578 aa8.83□□□□□ -1
MARK3-212ENST00000558223 ENPP3O14638 875 aa8.83□□□□□ -1
MARK3-212ENST00000558223 S100BP04271 92 aaPredicted RBP8.83□□□□□ -1
MARK3-212ENST00000558223 HOXC9P31274 260 aa8.83□□□□□ -1
MARK3-212ENST00000558223 EIF1AXP47813 144 aaKnown RBP8.83□□□□□ -1
MARK3-212ENST00000558223 SPRYD7Q5W111 196 aa8.83□□□□□ -1
MARK3-212ENST00000558223 IP6K1Q92551 441 aa8.83□□□□□ -1
MARK3-212ENST00000558223 ALKBH8Q96BT7 664 aaKnown RBP8.83□□□□□ -1
MARK3-212ENST00000558223 SPSB2Q99619 263 aa8.83□□□□□ -1
MARK3-212ENST00000558223 OCSTAMPQ9BR26 566 aa8.83□□□□□ -1
MARK3-212ENST00000558223 NIF3L1Q9GZT8 377 aa8.83□□□□□ -1
MARK3-212ENST00000558223 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.83□□□□□ -1
MARK3-212ENST00000558223 G3BP2Q9UN86 482 aaKnown RBP8.83□□□□□ -1
MARK3-212ENST00000558223 ADAMTSL3P82987 1691 aa8.82□□□□□ -1
MARK3-212ENST00000558223 GNAT3A8MTJ3 354 aa8.82□□□□□ -1
MARK3-212ENST00000558223 GPR182O15218 404 aa8.82□□□□□ -1
MARK3-212ENST00000558223 ZBTB24O43167 697 aaPredicted RBP8.82□□□□□ -1
MARK3-212ENST00000558223 HOXB7P09629 217 aa8.82□□□□□ -1
MARK3-212ENST00000558223 IGFBP4P22692 258 aa8.82□□□□□ -1
MARK3-212ENST00000558223 FBLN1P23142 703 aa8.82□□□□□ -1
MARK3-212ENST00000558223 CCT4P50991 539 aaKnown RBP8.82□□□□□ -1
MARK3-212ENST00000558223 NUCB1Q02818 461 aa8.82□□□□□ -1
MARK3-212ENST00000558223 ENOX2Q16206 610 aaKnown RBP8.82□□□□□ -1
MARK3-212ENST00000558223 AMOTQ4VCS5 1084 aa8.82□□□□□ -1
MARK3-212ENST00000558223 PLA2G2CQ5R387 149 aa8.82□□□□□ -1
MARK3-212ENST00000558223 NBPF6Q5VWK0 638 aa8.82□□□□□ -1
MARK3-212ENST00000558223 HS2ST1Q7LGA3 356 aa8.82□□□□□ -1
MARK3-212ENST00000558223 THAP11Q96EK4 314 aa8.82□□□□□ -1
MARK3-212ENST00000558223 NBPF4Q96M43 638 aa8.82□□□□□ -1
MARK3-212ENST00000558223 FAM129BQ96TA1 746 aa8.82□□□□□ -1
MARK3-212ENST00000558223 STK31Q9BXU1 1019 aa8.82□□□□□ -1
MARK3-212ENST00000558223 IRF2BPLQ9H1B7 796 aa8.82□□□□□ -1
MARK3-212ENST00000558223 SLKQ9H2G2 1235 aaPredicted RBP8.82□□□□□ -1
MARK3-212ENST00000558223 FMN2Q9NZ56 1722 aa8.82□□□□□ -1
MARK3-212ENST00000558223 HMMRO75330 724 aa8.81□□□□□ -1
MARK3-212ENST00000558223 ATF4P18848 351 aaPredicted RBP8.81□□□□□ -1
MARK3-212ENST00000558223 CCDC30Q5VVM6 783 aa8.81□□□□□ -1
MARK3-212ENST00000558223 FRMD6Q96NE9 622 aa8.81□□□□□ -1
MARK3-212ENST00000558223 TSPYL4Q9UJ04 414 aa8.81□□□□□ -1
MARK3-212ENST00000558223 HDAC5Q9UQL6 1122 aa8.81□□□□□ -1
MARK3-212ENST00000558223 PRKAB1Q9Y478 270 aa8.81□□□□□ -1
MARK3-212ENST00000558223 AK5Q9Y6K8 562 aa8.81□□□□□ -1
MARK3-212ENST00000558223 CRB1P82279 1406 aa8.8□□□□□ -1
MARK3-212ENST00000558223 MST1RQ04912 1400 aa8.8□□□□□ -1
MARK3-212ENST00000558223 FZD6O60353 706 aa8.8□□□□□ -1
MARK3-212ENST00000558223 JUNDP17535 347 aa8.8□□□□□ -1
MARK3-212ENST00000558223 TAF7Q15545 349 aaPredicted RBP8.8□□□□□ -1
MARK3-212ENST00000558223 MTHFSDQ2M296 383 aaKnown RBP8.8□□□□□ -1
MARK3-212ENST00000558223 C16orf46Q6P387 395 aa8.8□□□□□ -1
MARK3-212ENST00000558223 ZNF598Q86UK7 904 aaKnown RBP8.8□□□□□ -1
MARK3-212ENST00000558223 CHD1LQ86WJ1 897 aa8.8□□□□□ -1
MARK3-212ENST00000558223 C8orf58Q8NAV2 365 aa8.8□□□□□ -1
MARK3-212ENST00000558223 MKL1Q969V6 931 aa8.8□□□□□ -1
MARK3-212ENST00000558223 ZNF775Q96BV0 537 aaPredicted RBP8.8□□□□□ -1
MARK3-212ENST00000558223 C19orf44Q9H6X5 657 aa8.8□□□□□ -1
MARK3-212ENST00000558223 DDX56Q9NY93 547 aaKnown RBP8.8□□□□□ -1
MARK3-212ENST00000558223 GGT7Q9UJ14 662 aa8.8□□□□□ -1
MARK3-212ENST00000558223 CHD2O14647 1828 aaKnown RBP8.8□□□□□ -1
MARK3-212ENST00000558223 RGPD1P0DJD0 1748 aa8.8□□□□□ -1
MARK3-212ENST00000558223 GIGYF1O75420 1035 aaPredicted RBP8.79□□□□□ -1
MARK3-212ENST00000558223 EIF3JO75822 258 aaKnown RBP8.79□□□□□ -1
MARK3-212ENST00000558223 IGHA2P01877 340 aa8.79□□□□□ -1
MARK3-212ENST00000558223 PLEKHO1Q53GL0 409 aaPredicted RBP8.79□□□□□ -1
MARK3-212ENST00000558223 ESCO1Q5FWF5 840 aa8.79□□□□□ -1
MARK3-212ENST00000558223 BMP2KLQ5H9B9 411 aa8.79□□□□□ -1
MARK3-212ENST00000558223 RNF19BQ6ZMZ0 732 aa8.79□□□□□ -1
MARK3-212ENST00000558223 FAM160A2Q8N612 972 aaPredicted RBP8.79□□□□□ -1
MARK3-212ENST00000558223 TSPYL6Q8N831 410 aa8.79□□□□□ -1
MARK3-212ENST00000558223 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.79□□□□□ -1
MARK3-212ENST00000558223 THUMPD2Q9BTF0 503 aaKnown RBP8.79□□□□□ -1
MARK3-212ENST00000558223 SRA1Q9HD15 236 aaKnown RBP8.79□□□□□ -1
MARK3-212ENST00000558223 NEUROD4Q9HD90 331 aa8.79□□□□□ -1
MARK3-212ENST00000558223 DCCP43146 1447 aa8.79□□□□□ -1
MARK3-212ENST00000558223 MAP3K5Q99683 1374 aa8.78□□□□□ -1
MARK3-212ENST00000558223 HMGB1P1B2RPK0 211 aaPredicted RBP8.78□□□□□ -1
MARK3-212ENST00000558223 SSBP05455 408 aaKnown RBP eCLIP8.78□□□□□ -1
MARK3-212ENST00000558223 GNAI3P08754 354 aa8.78□□□□□ -1
MARK3-212ENST00000558223 SCG3Q8WXD2 468 aaKnown RBP8.78□□□□□ -1
MARK3-212ENST00000558223 SRPK1Q96SB4 655 aaKnown RBP8.78□□□□□ -1
MARK3-212ENST00000558223 TMX1Q9H3N1 280 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms