RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 MTMR14Q8NCE2 650 aa17.34■□□□□ 0.37
TMEM260-215ENST00000557626 C1QTNF1Q9BXJ1 281 aa17.34■□□□□ 0.37
TMEM260-215ENST00000557626 C11orf49Q9H6J7 331 aa17.34■□□□□ 0.37
TMEM260-215ENST00000557626 PCDHAC2Q9Y5I4 1007 aa17.34■□□□□ 0.37
TMEM260-215ENST00000557626 SPDYE5A6NIY4 337 aa17.33■□□□□ 0.36
TMEM260-215ENST00000557626 PXYLP1Q8TE99 480 aa17.33■□□□□ 0.36
TMEM260-215ENST00000557626 MUC6Q6W4X9 2439 aa17.33■□□□□ 0.36
TMEM260-215ENST00000557626 HSPA5P11021 654 aaKnown RBP17.32■□□□□ 0.36
TMEM260-215ENST00000557626 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.32■□□□□ 0.36
TMEM260-215ENST00000557626 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.32■□□□□ 0.36
TMEM260-215ENST00000557626 SPDYE2BA6NHP3 402 aa17.31■□□□□ 0.36
TMEM260-215ENST00000557626 SPDYE6P0CI01 402 aa17.31■□□□□ 0.36
TMEM260-215ENST00000557626 FLT3LGP49771 235 aa17.31■□□□□ 0.36
TMEM260-215ENST00000557626 GTF2IP78347 998 aa17.31■□□□□ 0.36
TMEM260-215ENST00000557626 ALYREFQ86V81 257 aaKnown RBP17.31■□□□□ 0.36
TMEM260-215ENST00000557626 ADAMTS19Q8TE59 1207 aa17.31■□□□□ 0.36
TMEM260-215ENST00000557626 IRF6O14896 467 aa17.3■□□□□ 0.36
TMEM260-215ENST00000557626 TNFAIP1Q13829 316 aa17.3■□□□□ 0.36
TMEM260-215ENST00000557626 CFAP100Q494V2 611 aa17.3■□□□□ 0.36
TMEM260-215ENST00000557626 ERO1BQ86YB8 467 aa17.3■□□□□ 0.36
TMEM260-215ENST00000557626 ANKRD18AQ8IVF6 992 aa17.3■□□□□ 0.36
TMEM260-215ENST00000557626 USP38Q8NB14 1042 aa17.3■□□□□ 0.36
TMEM260-215ENST00000557626 UHRF1Q96T88 793 aaPredicted RBP17.3■□□□□ 0.36
TMEM260-215ENST00000557626 TTYH1Q9H313 450 aaPredicted RBP17.3■□□□□ 0.36
TMEM260-215ENST00000557626 ATP5J2-PTCD1G3V325 749 aa17.29■□□□□ 0.36
TMEM260-215ENST00000557626 PDHXO00330 501 aa17.29■□□□□ 0.36
TMEM260-215ENST00000557626 CCDC152Q4G0S7 254 aa17.29■□□□□ 0.36
TMEM260-215ENST00000557626 PRMT6Q96LA8 375 aaPredicted RBP17.29■□□□□ 0.36
TMEM260-215ENST00000557626 AOX1Q06278 1338 aa17.28■□□□□ 0.36
TMEM260-215ENST00000557626 EIF4G2P78344 907 aaKnown RBP eCLIP17.28■□□□□ 0.36
TMEM260-215ENST00000557626 CC2D1BQ5T0F9 858 aaKnown RBP17.28■□□□□ 0.36
TMEM260-215ENST00000557626 ANKRD23Q86SG2 305 aa17.28■□□□□ 0.36
TMEM260-215ENST00000557626 LBHD1Q9BQE6 289 aaPredicted RBP17.28■□□□□ 0.36
TMEM260-215ENST00000557626 ISCA1Q9BUE6 129 aa17.28■□□□□ 0.36
TMEM260-215ENST00000557626 TAOK2Q9UL54 1235 aa17.28■□□□□ 0.36
TMEM260-215ENST00000557626 SNCAIPQ9Y6H5 919 aa17.28■□□□□ 0.36
TMEM260-215ENST00000557626 SPEF2Q9C093 1822 aa17.27■□□□□ 0.36
TMEM260-215ENST00000557626 HSP90B1P14625 803 aaKnown RBP17.27■□□□□ 0.36
TMEM260-215ENST00000557626 CCT4P50991 539 aaKnown RBP17.27■□□□□ 0.36
TMEM260-215ENST00000557626 PPIL2Q13356 520 aa17.27■□□□□ 0.36
TMEM260-215ENST00000557626 IRF5Q13568 498 aa17.27■□□□□ 0.36
TMEM260-215ENST00000557626 TXNRD3Q86VQ6 643 aa17.27■□□□□ 0.36
TMEM260-215ENST00000557626 DLG5Q8TDM6 1919 aa17.27■□□□□ 0.35
TMEM260-215ENST00000557626 ARAP2Q8WZ64 1704 aa17.27■□□□□ 0.35
TMEM260-215ENST00000557626 PFASO15067 1338 aa17.26■□□□□ 0.35
TMEM260-215ENST00000557626 F8W031 263 aaPredicted RBP17.26■□□□□ 0.35
TMEM260-215ENST00000557626 BCRP11274 1271 aa17.26■□□□□ 0.35
TMEM260-215ENST00000557626 RBM5P52756 815 aaKnown RBP eCLIP17.26■□□□□ 0.35
TMEM260-215ENST00000557626 CDAN1Q8IWY9 1227 aa17.26■□□□□ 0.35
TMEM260-215ENST00000557626 ATXN2LQ8WWM7 1075 aaKnown RBP17.26■□□□□ 0.35
TMEM260-215ENST00000557626 CCDC85AQ96PX6 553 aaPredicted RBP17.26■□□□□ 0.35
TMEM260-215ENST00000557626 TEPSINQ96N21 525 aa17.25■□□□□ 0.35
TMEM260-215ENST00000557626 PARK7Q99497 189 aaKnown RBP17.25■□□□□ 0.35
TMEM260-215ENST00000557626 CERS5Q8N5B7 392 aa17.24■□□□□ 0.35
TMEM260-215ENST00000557626 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.24■□□□□ 0.35
TMEM260-215ENST00000557626 IL27Q8NEV9 243 aa17.24■□□□□ 0.35
TMEM260-215ENST00000557626 PLBD2Q8NHP8 589 aa17.24■□□□□ 0.35
TMEM260-215ENST00000557626 ASB2Q96Q27 587 aa17.24■□□□□ 0.35
TMEM260-215ENST00000557626 TNPO2O14787 897 aaKnown RBP17.23■□□□□ 0.35
TMEM260-215ENST00000557626 U2AF1L5P0DN76 240 aaPredicted RBP17.23■□□□□ 0.35
TMEM260-215ENST00000557626 U2AF1Q01081 240 aaKnown RBP eCLIP17.23■□□□□ 0.35
TMEM260-215ENST00000557626 LRFN3Q9BTN0 628 aa17.23■□□□□ 0.35
TMEM260-215ENST00000557626 MINPP1Q9UNW1 487 aa17.23■□□□□ 0.35
TMEM260-215ENST00000557626 NUDCQ9Y266 331 aa17.23■□□□□ 0.35
TMEM260-215ENST00000557626 DOCK3Q8IZD9 2030 aa17.22■□□□□ 0.35
TMEM260-215ENST00000557626 SMAD3P84022 425 aaKnown RBP17.22■□□□□ 0.35
TMEM260-215ENST00000557626 ZBTB38Q8NAP3 1195 aaPredicted RBP17.22■□□□□ 0.35
TMEM260-215ENST00000557626 ZKSCAN4Q969J2 545 aaPredicted RBP17.22■□□□□ 0.35
TMEM260-215ENST00000557626 WRNIP1Q96S55 665 aa17.22■□□□□ 0.35
TMEM260-215ENST00000557626 TMEM39BQ9GZU3 492 aa17.22■□□□□ 0.35
TMEM260-215ENST00000557626 THEGQ9P2T0 379 aa17.22■□□□□ 0.35
TMEM260-215ENST00000557626 LRRC26Q2I0M4 334 aa17.21■□□□□ 0.35
TMEM260-215ENST00000557626 SPDYE2Q495Y8 402 aa17.21■□□□□ 0.35
TMEM260-215ENST00000557626 CDC5LQ99459 802 aaKnown RBP17.21■□□□□ 0.35
TMEM260-215ENST00000557626 HMX1Q9NP08 348 aaPredicted RBP17.21■□□□□ 0.35
TMEM260-215ENST00000557626 ZNF70Q9UC06 446 aaPredicted RBP17.21■□□□□ 0.35
TMEM260-215ENST00000557626 OGDHLQ9ULD0 1010 aa17.21■□□□□ 0.35
TMEM260-215ENST00000557626 HMGCRP04035 888 aa17.2■□□□□ 0.34
TMEM260-215ENST00000557626 KLRK1P26718 216 aa17.2■□□□□ 0.34
TMEM260-215ENST00000557626 PPATQ06203 517 aa17.2■□□□□ 0.34
TMEM260-215ENST00000557626 CFAP53Q96M91 514 aa17.2■□□□□ 0.34
TMEM260-215ENST00000557626 P2RX7Q99572 595 aaKnown RBP17.2■□□□□ 0.34
TMEM260-215ENST00000557626 TSPYL4Q9UJ04 414 aa17.2■□□□□ 0.34
TMEM260-215ENST00000557626 LEMD3Q9Y2U8 911 aa17.2■□□□□ 0.34
TMEM260-215ENST00000557626 TCP10L2B9ZVM9 353 aa17.19■□□□□ 0.34
TMEM260-215ENST00000557626 PDE8AO60658 829 aa17.19■□□□□ 0.34
TMEM260-215ENST00000557626 CYP2C8P10632 490 aa17.19■□□□□ 0.34
TMEM260-215ENST00000557626 TNNI2P48788 182 aa17.19■□□□□ 0.34
TMEM260-215ENST00000557626 MRPS5P82675 430 aaKnown RBP17.19■□□□□ 0.34
TMEM260-215ENST00000557626 SHHQ15465 462 aa17.19■□□□□ 0.34
TMEM260-215ENST00000557626 BSDC1Q9NW68 430 aaPredicted RBP17.19■□□□□ 0.34
TMEM260-215ENST00000557626 TRIM28Q13263 835 aaKnown RBP17.18■□□□□ 0.34
TMEM260-215ENST00000557626 COA7Q96BR5 231 aa17.18■□□□□ 0.34
TMEM260-215ENST00000557626 TDRD3Q9H7E2 651 aaKnown RBP17.18■□□□□ 0.34
TMEM260-215ENST00000557626 CD209Q9NNX6 404 aa17.18■□□□□ 0.34
TMEM260-215ENST00000557626 LTBP2Q14767 1821 aa17.17■□□□□ 0.34
TMEM260-215ENST00000557626 COL6A1P12109 1028 aa17.17■□□□□ 0.34
TMEM260-215ENST00000557626 PPM1EQ8WY54 764 aa17.17■□□□□ 0.34
TMEM260-215ENST00000557626 MAST2Q6P0Q8 1798 aa17.17■□□□□ 0.34
TMEM260-215ENST00000557626 XIRP2A4UGR9 3374 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms