RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 RAB11FIP3O75154 756 aa15.34■□□□□ 0.05
SLIRP-209ENST00000557342 LDHBP07195 334 aaKnown RBP15.34■□□□□ 0.05
SLIRP-209ENST00000557342 ARID4AP29374 1257 aaPredicted RBP15.34■□□□□ 0.05
SLIRP-209ENST00000557342 RASGRF1Q13972 1273 aa15.34■□□□□ 0.05
SLIRP-209ENST00000557342 TTC39AQ5SRH9 613 aa15.34■□□□□ 0.05
SLIRP-209ENST00000557342 RHPN1Q8TCX5 695 aa15.34■□□□□ 0.05
SLIRP-209ENST00000557342 KIF1BPQ96EK5 621 aa15.34■□□□□ 0.05
SLIRP-209ENST00000557342 CDCA5Q96FF9 252 aa15.34■□□□□ 0.05
SLIRP-209ENST00000557342 TLL2Q9Y6L7 1015 aa15.34■□□□□ 0.05
SLIRP-209ENST00000557342 CNTNAP1P78357 1384 aa15.34■□□□□ 0.05
SLIRP-209ENST00000557342 RASSF10A6NK89 507 aa15.33■□□□□ 0.04
SLIRP-209ENST00000557342 GRIK5Q16478 980 aa15.33■□□□□ 0.04
SLIRP-209ENST00000557342 DEFB115Q30KQ5 88 aa15.33■□□□□ 0.04
SLIRP-209ENST00000557342 SPTY2D1Q68D10 685 aaPredicted RBP15.33■□□□□ 0.04
SLIRP-209ENST00000557342 HHIPL2Q6UWX4 724 aa15.33■□□□□ 0.04
SLIRP-209ENST00000557342 C2orf69Q8N8R5 385 aa15.33■□□□□ 0.04
SLIRP-209ENST00000557342 DBNDD2Q9BQY9 259 aa15.33■□□□□ 0.04
SLIRP-209ENST00000557342 PAPPA2Q9BXP8 1791 aa15.32■□□□□ 0.04
SLIRP-209ENST00000557342 NF2P35240 595 aa15.32■□□□□ 0.04
SLIRP-209ENST00000557342 TNFAIP1Q13829 316 aa15.32■□□□□ 0.04
SLIRP-209ENST00000557342 SPDYE2Q495Y8 402 aa15.32■□□□□ 0.04
SLIRP-209ENST00000557342 CLASRPQ8N2M8 674 aaKnown RBP15.32■□□□□ 0.04
SLIRP-209ENST00000557342 SPATA5Q8NB90 893 aa15.32■□□□□ 0.04
SLIRP-209ENST00000557342 EAF2Q96CJ1 260 aaPredicted RBP15.32■□□□□ 0.04
SLIRP-209ENST00000557342 ZNF512BQ96KM6 892 aaPredicted RBP15.32■□□□□ 0.04
SLIRP-209ENST00000557342 ZDHHC15Q96MV8 337 aa15.32■□□□□ 0.04
SLIRP-209ENST00000557342 GBA2Q9HCG7 927 aaPredicted RBP15.32■□□□□ 0.04
SLIRP-209ENST00000557342 HMG20BQ9P0W2 317 aa15.32■□□□□ 0.04
SLIRP-209ENST00000557342 MKRN1Q9UHC7 482 aaKnown RBP15.32■□□□□ 0.04
SLIRP-209ENST00000557342 PCDHAC2Q9Y5I4 1007 aa15.32■□□□□ 0.04
SLIRP-209ENST00000557342 PPP2R3BQ9Y5P8 575 aa15.32■□□□□ 0.04
SLIRP-209ENST00000557342 CLRN2A0PK11 232 aa15.31■□□□□ 0.04
SLIRP-209ENST00000557342 PRDX5P30044 214 aa15.31■□□□□ 0.04
SLIRP-209ENST00000557342 DLK2Q6UY11 383 aa15.31■□□□□ 0.04
SLIRP-209ENST00000557342 SAPCD2Q86UD0 394 aa15.31■□□□□ 0.04
SLIRP-209ENST00000557342 AACSQ86V21 672 aa15.31■□□□□ 0.04
SLIRP-209ENST00000557342 SLF2Q8IX21 1173 aa15.31■□□□□ 0.04
SLIRP-209ENST00000557342 HHIPL1Q96JK4 782 aa15.31■□□□□ 0.04
SLIRP-209ENST00000557342 CRBNQ96SW2 442 aa15.31■□□□□ 0.04
SLIRP-209ENST00000557342 CCDC8Q9H0W5 538 aaPredicted RBP15.31■□□□□ 0.04
SLIRP-209ENST00000557342 TDRD3Q9H7E2 651 aaKnown RBP15.31■□□□□ 0.04
SLIRP-209ENST00000557342 VEZTQ9HBM0 779 aa15.31■□□□□ 0.04
SLIRP-209ENST00000557342 TMOD2Q9NZR1 351 aa15.31■□□□□ 0.04
SLIRP-209ENST00000557342 ZNF70Q9UC06 446 aaPredicted RBP15.31■□□□□ 0.04
SLIRP-209ENST00000557342 ABCF2Q9UG63 623 aa15.31■□□□□ 0.04
SLIRP-209ENST00000557342 ECE1P42892 770 aa15.3■□□□□ 0.04
SLIRP-209ENST00000557342 MCAMP43121 646 aa15.3■□□□□ 0.04
SLIRP-209ENST00000557342 FKBP1BP68106 108 aa15.3■□□□□ 0.04
SLIRP-209ENST00000557342 AAMPQ13685 434 aa15.3■□□□□ 0.04
SLIRP-209ENST00000557342 MAST2Q6P0Q8 1798 aa15.3■□□□□ 0.04
SLIRP-209ENST00000557342 ERICH6Q7L0X2 663 aa15.3■□□□□ 0.04
SLIRP-209ENST00000557342 DZIP1Q86YF9 867 aaKnown RBP15.3■□□□□ 0.04
SLIRP-209ENST00000557342 JMYQ8N9B5 988 aa15.3■□□□□ 0.04
SLIRP-209ENST00000557342 DEFB129Q9H1M3 183 aa15.3■□□□□ 0.04
SLIRP-209ENST00000557342 IL1RAPL2Q9NP60 686 aa15.3■□□□□ 0.04
SLIRP-209ENST00000557342 DBNLQ9UJU6 430 aaKnown RBP15.3■□□□□ 0.04
SLIRP-209ENST00000557342 SCAF8Q9UPN6 1271 aaKnown RBP15.3■□□□□ 0.04
SLIRP-209ENST00000557342 MYO5AQ9Y4I1 1855 aaKnown RBP15.29■□□□□ 0.04
SLIRP-209ENST00000557342 APBB1O00213 710 aa15.29■□□□□ 0.04
SLIRP-209ENST00000557342 TNNI2P48788 182 aa15.29■□□□□ 0.04
SLIRP-209ENST00000557342 IFFO2Q5TF58 517 aa15.29■□□□□ 0.04
SLIRP-209ENST00000557342 PAXIP1Q6ZW49 1069 aaPredicted RBP15.29■□□□□ 0.04
SLIRP-209ENST00000557342 AK9Q5TCS8 1911 aa15.28■□□□□ 0.04
SLIRP-209ENST00000557342 IGSF3O75054 1194 aa15.28■□□□□ 0.04
SLIRP-209ENST00000557342 IFIT2P09913 472 aaKnown RBP15.28■□□□□ 0.04
SLIRP-209ENST00000557342 HUNKP57058 714 aa15.28■□□□□ 0.04
SLIRP-209ENST00000557342 SUPT20HL1Q3ZLR7 823 aa15.28■□□□□ 0.04
SLIRP-209ENST00000557342 APOBEC3HQ6NTF7 200 aaKnown RBP15.28■□□□□ 0.04
SLIRP-209ENST00000557342 LRRCC1Q9C099 1032 aa15.28■□□□□ 0.04
SLIRP-209ENST00000557342 TLR7Q9NYK1 1049 aaKnown RBP15.28■□□□□ 0.04
SLIRP-209ENST00000557342 DAGLAQ9Y4D2 1042 aa15.28■□□□□ 0.04
SLIRP-209ENST00000557342 DOCK2Q92608 1830 aa15.27■□□□□ 0.04
SLIRP-209ENST00000557342 AOX1Q06278 1338 aa15.27■□□□□ 0.04
SLIRP-209ENST00000557342 WDR33Q9C0J8 1336 aaKnown RBP15.27■□□□□ 0.04
SLIRP-209ENST00000557342 LDHCP07864 332 aa15.27■□□□□ 0.04
SLIRP-209ENST00000557342 VEGFBP49765 207 aa15.27■□□□□ 0.04
SLIRP-209ENST00000557342 GSTO1P78417 241 aa15.27■□□□□ 0.04
SLIRP-209ENST00000557342 RASA3Q14644 834 aa15.27■□□□□ 0.04
SLIRP-209ENST00000557342 DIXDC1Q155Q3 683 aa15.27■□□□□ 0.04
SLIRP-209ENST00000557342 FKBP1CQ5VVH2 108 aa15.27■□□□□ 0.04
SLIRP-209ENST00000557342 PRAMEF18Q5VWM3 479 aa15.27■□□□□ 0.04
SLIRP-209ENST00000557342 PI16Q6UXB8 463 aa15.27■□□□□ 0.04
SLIRP-209ENST00000557342 ARMC9Q7Z3E5 817 aa15.27■□□□□ 0.04
SLIRP-209ENST00000557342 CAPNS2Q96L46 248 aa15.27■□□□□ 0.04
SLIRP-209ENST00000557342 DCTPP1Q9H773 170 aa15.27■□□□□ 0.04
SLIRP-209ENST00000557342 LRP2BPQ9P2M1 347 aa15.27■□□□□ 0.04
SLIRP-209ENST00000557342 SUPT16HQ9Y5B9 1047 aaKnown RBP15.27■□□□□ 0.04
SLIRP-209ENST00000557342 GAKO14976 1311 aa15.26■□□□□ 0.03
SLIRP-209ENST00000557342 THSD7BQ9C0I4 1608 aa15.26■□□□□ 0.03
SLIRP-209ENST00000557342 TCP10L2B9ZVM9 353 aa15.26■□□□□ 0.03
SLIRP-209ENST00000557342 TTLL12Q14166 644 aaPredicted RBP15.26■□□□□ 0.03
SLIRP-209ENST00000557342 TBC1D9Q6ZT07 1266 aa15.26■□□□□ 0.03
SLIRP-209ENST00000557342 FAM163AQ96GL9 167 aaPredicted RBP15.26■□□□□ 0.03
SLIRP-209ENST00000557342 SNRKQ9NRH2 765 aa15.26■□□□□ 0.03
SLIRP-209ENST00000557342 RAI14Q9P0K7 980 aa15.26■□□□□ 0.03
SLIRP-209ENST00000557342 PCDHB15Q9Y5E8 787 aa15.26■□□□□ 0.03
SLIRP-209ENST00000557342 MROH7-TTC4A0A0A0MT08 1334 aa15.25■□□□□ 0.03
SLIRP-209ENST00000557342 MECOMQ03112 1051 aa15.25■□□□□ 0.03
SLIRP-209ENST00000557342 CYP4F22Q6NT55 531 aa15.25■□□□□ 0.03
SLIRP-209ENST00000557342 RGMBQ6NW40 437 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms