RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 SUGT1Q9Y2Z0 365 aa25.57■■□□□ 1.68
SEC23A-213ENST00000557280 LDHBP07195 334 aaKnown RBP25.56■■□□□ 1.68
SEC23A-213ENST00000557280 CRKP46108 304 aa25.56■■□□□ 1.68
SEC23A-213ENST00000557280 CHADLQ6NUI6 762 aa25.56■■□□□ 1.68
SEC23A-213ENST00000557280 ZNF384Q8TF68 577 aa25.56■■□□□ 1.68
SEC23A-213ENST00000557280 LNPKQ9C0E8 428 aa25.56■■□□□ 1.68
SEC23A-213ENST00000557280 ANTXR1Q9H6X2 564 aa25.56■■□□□ 1.68
SEC23A-213ENST00000557280 SALL3Q9BXA9 1300 aa25.56■■□□□ 1.68
SEC23A-213ENST00000557280 NUCB1Q02818 461 aa25.55■■□□□ 1.68
SEC23A-213ENST00000557280 BOLA2Q9H3K6 86 aa25.55■■□□□ 1.68
SEC23A-213ENST00000557280 GGA3Q9NZ52 723 aa25.55■■□□□ 1.68
SEC23A-213ENST00000557280 SERPINA10Q9UK55 444 aa25.55■■□□□ 1.68
SEC23A-213ENST00000557280 MYO5AQ9Y4I1 1855 aaKnown RBP25.54■■□□□ 1.68
SEC23A-213ENST00000557280 SPDYE2BA6NHP3 402 aa25.54■■□□□ 1.68
SEC23A-213ENST00000557280 SPDYE6P0CI01 402 aa25.54■■□□□ 1.68
SEC23A-213ENST00000557280 ATP5JP18859 108 aa25.54■■□□□ 1.68
SEC23A-213ENST00000557280 RBM5P52756 815 aaKnown RBP eCLIP25.54■■□□□ 1.68
SEC23A-213ENST00000557280 DLGAP5Q15398 846 aa25.54■■□□□ 1.68
SEC23A-213ENST00000557280 ZGPATQ8N5A5 531 aaKnown RBP25.54■■□□□ 1.68
SEC23A-213ENST00000557280 SMC1BQ8NDV3 1235 aa25.54■■□□□ 1.68
SEC23A-213ENST00000557280 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.54■■□□□ 1.68
SEC23A-213ENST00000557280 EDC3Q96F86 508 aaKnown RBP25.54■■□□□ 1.68
SEC23A-213ENST00000557280 PRMT6Q96LA8 375 aaPredicted RBP25.54■■□□□ 1.68
SEC23A-213ENST00000557280 ECHDC1Q9NTX5 307 aa25.54■■□□□ 1.68
SEC23A-213ENST00000557280 PGAP2Q9UHJ9 254 aa25.54■■□□□ 1.68
SEC23A-213ENST00000557280 SCAF8Q9UPN6 1271 aaKnown RBP25.54■■□□□ 1.68
SEC23A-213ENST00000557280 MMP14P50281 582 aa25.53■■□□□ 1.68
SEC23A-213ENST00000557280 MECOMQ03112 1051 aa25.53■■□□□ 1.68
SEC23A-213ENST00000557280 ANGEL2Q5VTE6 544 aaKnown RBP25.53■■□□□ 1.68
SEC23A-213ENST00000557280 CHD1LQ86WJ1 897 aa25.53■■□□□ 1.68
SEC23A-213ENST00000557280 MTMR14Q8NCE2 650 aa25.53■■□□□ 1.68
SEC23A-213ENST00000557280 DNAJC2Q99543 621 aaKnown RBP25.53■■□□□ 1.68
SEC23A-213ENST00000557280 MAST2Q6P0Q8 1798 aa25.53■■□□□ 1.68
SEC23A-213ENST00000557280 DLK2Q6UY11 383 aa25.52■■□□□ 1.68
SEC23A-213ENST00000557280 ERICH6Q7L0X2 663 aa25.52■■□□□ 1.68
SEC23A-213ENST00000557280 DZIP1Q86YF9 867 aaKnown RBP25.52■■□□□ 1.68
SEC23A-213ENST00000557280 TEKT1Q969V4 418 aa25.52■■□□□ 1.68
SEC23A-213ENST00000557280 DAGLAQ9Y4D2 1042 aa25.52■■□□□ 1.68
SEC23A-213ENST00000557280 MAST3O60307 1309 aa25.52■■□□□ 1.68
SEC23A-213ENST00000557280 DOCK2Q92608 1830 aa25.51■■□□□ 1.67
SEC23A-213ENST00000557280 MX1P20591 662 aa25.51■■□□□ 1.67
SEC23A-213ENST00000557280 HDLBPQ00341 1268 aaKnown RBP25.51■■□□□ 1.67
SEC23A-213ENST00000557280 ZC3H15Q8WU90 426 aaKnown RBP25.51■■□□□ 1.67
SEC23A-213ENST00000557280 NSUN4Q96CB9 384 aaKnown RBP25.51■■□□□ 1.67
SEC23A-213ENST00000557280 HAUS7Q99871 368 aa25.51■■□□□ 1.67
SEC23A-213ENST00000557280 GLIS2Q9BZE0 524 aaPredicted RBP25.51■■□□□ 1.67
SEC23A-213ENST00000557280 RAI14Q9P0K7 980 aa25.51■■□□□ 1.67
SEC23A-213ENST00000557280 ZBTB47Q9UFB7 747 aaPredicted RBP25.51■■□□□ 1.67
SEC23A-213ENST00000557280 CLRN2A0PK11 232 aa25.5■■□□□ 1.67
SEC23A-213ENST00000557280 GOLIM4O00461 696 aa25.5■■□□□ 1.67
SEC23A-213ENST00000557280 FMR1Q06787 632 aaKnown RBP eCLIP25.5■■□□□ 1.67
SEC23A-213ENST00000557280 SPTY2D1Q68D10 685 aaPredicted RBP25.5■■□□□ 1.67
SEC23A-213ENST00000557280 CNTROBQ8N137 903 aa25.5■■□□□ 1.67
SEC23A-213ENST00000557280 PI4K2BQ8TCG2 481 aa25.5■■□□□ 1.67
SEC23A-213ENST00000557280 ZDHHC15Q96MV8 337 aa25.5■■□□□ 1.67
SEC23A-213ENST00000557280 LRP2BPQ9P2M1 347 aa25.5■■□□□ 1.67
SEC23A-213ENST00000557280 ECM29Q5VYK3 1845 aa25.49■■□□□ 1.67
SEC23A-213ENST00000557280 ADM5C9JUS6 153 aa25.49■■□□□ 1.67
SEC23A-213ENST00000557280 ITGBL1O95965 494 aaPredicted RBP25.49■■□□□ 1.67
SEC23A-213ENST00000557280 APOBEC3HQ6NTF7 200 aaKnown RBP25.49■■□□□ 1.67
SEC23A-213ENST00000557280 HHIPL2Q6UWX4 724 aa25.49■■□□□ 1.67
SEC23A-213ENST00000557280 GPATCH3Q96I76 525 aa25.49■■□□□ 1.67
SEC23A-213ENST00000557280 TTC41PQ6P2S7 1318 aa25.48■■□□□ 1.67
SEC23A-213ENST00000557280 MYH2Q9UKX2 1941 aa25.48■■□□□ 1.67
SEC23A-213ENST00000557280 TRAF5O00463 557 aa25.48■■□□□ 1.67
SEC23A-213ENST00000557280 C1QTNF8P60827 252 aa25.48■■□□□ 1.67
SEC23A-213ENST00000557280 FSTL1Q12841 308 aa25.48■■□□□ 1.67
SEC23A-213ENST00000557280 MRIQ9BWK5 157 aa25.48■■□□□ 1.67
SEC23A-213ENST00000557280 TDRD3Q9H7E2 651 aaKnown RBP25.48■■□□□ 1.67
SEC23A-213ENST00000557280 GAKO14976 1311 aa25.47■■□□□ 1.67
SEC23A-213ENST00000557280 IDH1O75874 414 aaKnown RBP25.47■■□□□ 1.67
SEC23A-213ENST00000557280 PDE4AP27815 886 aa25.47■■□□□ 1.67
SEC23A-213ENST00000557280 DCPSQ96C86 337 aaKnown RBP25.47■■□□□ 1.67
SEC23A-213ENST00000557280 PAG1Q9NWQ8 432 aa25.47■■□□□ 1.67
SEC23A-213ENST00000557280 MROH7-TTC4A0A0A0MT08 1334 aa25.46■■□□□ 1.67
SEC23A-213ENST00000557280 PDE1AP54750 535 aa25.46■■□□□ 1.67
SEC23A-213ENST00000557280 SPDYE2Q495Y8 402 aa25.46■■□□□ 1.67
SEC23A-213ENST00000557280 KRT26Q7Z3Y9 468 aa25.46■■□□□ 1.67
SEC23A-213ENST00000557280 ADGRA1Q86SQ6 560 aa25.46■■□□□ 1.67
SEC23A-213ENST00000557280 USP48Q86UV5 1035 aa25.46■■□□□ 1.67
SEC23A-213ENST00000557280 PASKQ96RG2 1323 aa25.45■■□□□ 1.66
SEC23A-213ENST00000557280 PITPNM2Q9BZ72 1349 aa25.45■■□□□ 1.66
SEC23A-213ENST00000557280 MAP4K4O95819 1239 aaPredicted RBP25.45■■□□□ 1.66
SEC23A-213ENST00000557280 CACNB3P54284 484 aa25.45■■□□□ 1.66
SEC23A-213ENST00000557280 ZNF70Q9UC06 446 aaPredicted RBP25.45■■□□□ 1.66
SEC23A-213ENST00000557280 STAP2Q9UGK3 403 aa25.45■■□□□ 1.66
SEC23A-213ENST00000557280 POLR2AP24928 1970 aaKnown RBP25.45■■□□□ 1.66
SEC23A-213ENST00000557280 PLEKHM2Q8IWE5 1019 aa25.44■■□□□ 1.66
SEC23A-213ENST00000557280 VEZTQ9HBM0 779 aa25.44■■□□□ 1.66
SEC23A-213ENST00000557280 CHGBP05060 677 aa25.43■■□□□ 1.66
SEC23A-213ENST00000557280 BTDP43251 543 aa25.43■■□□□ 1.66
SEC23A-213ENST00000557280 SLFNL1Q499Z3 407 aa25.43■■□□□ 1.66
SEC23A-213ENST00000557280 NAA16Q6N069 864 aaPredicted RBP25.43■■□□□ 1.66
SEC23A-213ENST00000557280 CDC37L1Q7L3B6 337 aa25.43■■□□□ 1.66
SEC23A-213ENST00000557280 FAM163AQ96GL9 167 aaPredicted RBP25.43■■□□□ 1.66
SEC23A-213ENST00000557280 MYO1BO43795 1136 aa25.42■■□□□ 1.66
SEC23A-213ENST00000557280 GLRX3O76003 335 aaKnown RBP25.42■■□□□ 1.66
SEC23A-213ENST00000557280 TTF1Q15361 905 aaPredicted RBP25.42■■□□□ 1.66
SEC23A-213ENST00000557280 PRAMEF18Q5VWM3 479 aa25.42■■□□□ 1.66
SEC23A-213ENST00000557280 CDC42EP5Q6NZY7 148 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms