RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 CFHP08603 1231 aa11.19□□□□□ -0.62
VRK1-206ENST00000557222 DDX10Q13206 875 aaKnown RBP11.19□□□□□ -0.62
VRK1-206ENST00000557222 CCDC152Q4G0S7 254 aa11.19□□□□□ -0.62
VRK1-206ENST00000557222 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.19□□□□□ -0.62
VRK1-206ENST00000557222 AGBL3Q8NEM8 1001 aa11.19□□□□□ -0.62
VRK1-206ENST00000557222 NLRP7Q8WX94 980 aa11.19□□□□□ -0.62
VRK1-206ENST00000557222 ZNF408Q9H9D4 720 aa11.19□□□□□ -0.62
VRK1-206ENST00000557222 SAGE1Q9NXZ1 904 aa11.19□□□□□ -0.62
VRK1-206ENST00000557222 PCDHB3Q9Y5E6 796 aa11.19□□□□□ -0.62
VRK1-206ENST00000557222 RTL9Q8NET4 1388 aa11.18□□□□□ -0.62
VRK1-206ENST00000557222 SHTN1A0MZ66 631 aa11.18□□□□□ -0.62
VRK1-206ENST00000557222 PDE8AO60658 829 aa11.18□□□□□ -0.62
VRK1-206ENST00000557222 ZNF280AP59817 542 aaPredicted RBP11.18□□□□□ -0.62
VRK1-206ENST00000557222 KMT5BQ4FZB7 885 aa11.18□□□□□ -0.62
VRK1-206ENST00000557222 TBC1D10BQ4KMP7 808 aaPredicted RBP11.18□□□□□ -0.62
VRK1-206ENST00000557222 RGMBQ6NW40 437 aa11.18□□□□□ -0.62
VRK1-206ENST00000557222 GBA2Q9HCG7 927 aaPredicted RBP11.18□□□□□ -0.62
VRK1-206ENST00000557222 GGA1Q9UJY5 639 aa11.18□□□□□ -0.62
VRK1-206ENST00000557222 FAM155AB1AL88 458 aaPredicted RBP11.17□□□□□ -0.62
VRK1-206ENST00000557222 ACTN4O43707 911 aaKnown RBP11.17□□□□□ -0.62
VRK1-206ENST00000557222 DDX58O95786 925 aaKnown RBP11.17□□□□□ -0.62
VRK1-206ENST00000557222 MMP14P50281 582 aa11.17□□□□□ -0.62
VRK1-206ENST00000557222 MLLT1Q03111 559 aaPredicted RBP11.17□□□□□ -0.62
VRK1-206ENST00000557222 MAP2K5Q13163 448 aa11.17□□□□□ -0.62
VRK1-206ENST00000557222 SULF1Q8IWU6 871 aa11.17□□□□□ -0.62
VRK1-206ENST00000557222 METTL22Q9BUU2 404 aaPredicted RBP11.17□□□□□ -0.62
VRK1-206ENST00000557222 CWC25Q9NXE8 425 aaPredicted RBP11.17□□□□□ -0.62
VRK1-206ENST00000557222 ANKIB1Q9P2G1 1089 aa11.17□□□□□ -0.62
VRK1-206ENST00000557222 DAXXQ9UER7 740 aaPredicted RBP11.17□□□□□ -0.62
VRK1-206ENST00000557222 POLR2AP24928 1970 aaKnown RBP11.17□□□□□ -0.62
VRK1-206ENST00000557222 XDHP47989 1333 aa11.16□□□□□ -0.62
VRK1-206ENST00000557222 CCDC85CA6NKD9 419 aa11.16□□□□□ -0.62
VRK1-206ENST00000557222 UFL1O94874 794 aa11.16□□□□□ -0.62
VRK1-206ENST00000557222 ATP2B4P23634 1241 aa11.16□□□□□ -0.62
VRK1-206ENST00000557222 FKBP1BP68106 108 aa11.16□□□□□ -0.62
VRK1-206ENST00000557222 KIF4BQ2VIQ3 1234 aa11.16□□□□□ -0.62
VRK1-206ENST00000557222 RTL5Q5HYW3 569 aaPredicted RBP11.16□□□□□ -0.62
VRK1-206ENST00000557222 CCDC30Q5VVM6 783 aa11.16□□□□□ -0.62
VRK1-206ENST00000557222 RSBN1LQ6PCB5 846 aaPredicted RBP11.16□□□□□ -0.62
VRK1-206ENST00000557222 BLOC1S3Q6QNY0 202 aa11.16□□□□□ -0.62
VRK1-206ENST00000557222 PODNQ7Z5L7 613 aa11.16□□□□□ -0.62
VRK1-206ENST00000557222 NKX2-3Q8TAU0 364 aa11.16□□□□□ -0.62
VRK1-206ENST00000557222 MCOLN1Q9GZU1 580 aa11.16□□□□□ -0.62
VRK1-206ENST00000557222 SEC31BQ9NQW1 1179 aa11.16□□□□□ -0.62
VRK1-206ENST00000557222 KCNQ5Q9NR82 932 aa11.16□□□□□ -0.62
VRK1-206ENST00000557222 CASP8AP2Q9UKL3 1982 aa11.16□□□□□ -0.62
VRK1-206ENST00000557222 PITPNM2Q9BZ72 1349 aa11.15□□□□□ -0.62
VRK1-206ENST00000557222 EGFRP00533 1210 aa11.15□□□□□ -0.62
VRK1-206ENST00000557222 ZNF157P51786 506 aaPredicted RBP11.15□□□□□ -0.62
VRK1-206ENST00000557222 ANKRD18AQ8IVF6 992 aa11.15□□□□□ -0.62
VRK1-206ENST00000557222 GMLQ99445 158 aa11.15□□□□□ -0.62
VRK1-206ENST00000557222 MYD88Q99836 296 aa11.15□□□□□ -0.62
VRK1-206ENST00000557222 PHAXQ9H814 394 aaKnown RBP11.15□□□□□ -0.62
VRK1-206ENST00000557222 PRKRIP1Q9H875 184 aaPredicted RBP11.15□□□□□ -0.62
VRK1-206ENST00000557222 APAF1O14727 1248 aa11.14□□□□□ -0.63
VRK1-206ENST00000557222 KIF23Q02241 960 aaPredicted RBP11.14□□□□□ -0.63
VRK1-206ENST00000557222 DGKZQ13574 1117 aa11.14□□□□□ -0.63
VRK1-206ENST00000557222 ZNF428Q96B54 188 aa11.14□□□□□ -0.63
VRK1-206ENST00000557222 ZIC5Q96T25 663 aa11.14□□□□□ -0.63
VRK1-206ENST00000557222 CDC5LQ99459 802 aaKnown RBP11.14□□□□□ -0.63
VRK1-206ENST00000557222 BSDC1Q9NW68 430 aaPredicted RBP11.14□□□□□ -0.63
VRK1-206ENST00000557222 GGA3Q9NZ52 723 aa11.14□□□□□ -0.63
VRK1-206ENST00000557222 PDE4DIPQ5VU43 2346 aa11.13□□□□□ -0.63
VRK1-206ENST00000557222 USP17L3A6NCW0 530 aa11.13□□□□□ -0.63
VRK1-206ENST00000557222 USP17L4A6NCW7 530 aa11.13□□□□□ -0.63
VRK1-206ENST00000557222 ADM5C9JUS6 153 aa11.13□□□□□ -0.63
VRK1-206ENST00000557222 IRF6O14896 467 aa11.13□□□□□ -0.63
VRK1-206ENST00000557222 USP17L8P0C7I0 530 aa11.13□□□□□ -0.63
VRK1-206ENST00000557222 SCARF1Q14162 830 aa11.13□□□□□ -0.63
VRK1-206ENST00000557222 PPP1R18Q6NYC8 613 aa11.13□□□□□ -0.63
VRK1-206ENST00000557222 KSR2Q6VAB6 950 aa11.13□□□□□ -0.63
VRK1-206ENST00000557222 USP17L1Q7RTZ2 530 aa11.13□□□□□ -0.63
VRK1-206ENST00000557222 C8orf58Q8NAV2 365 aa11.13□□□□□ -0.63
VRK1-206ENST00000557222 CDCA5Q96FF9 252 aa11.13□□□□□ -0.63
VRK1-206ENST00000557222 SCN9AQ15858 1988 aa11.13□□□□□ -0.63
VRK1-206ENST00000557222 COL4A1P02462 1669 aa11.12□□□□□ -0.63
VRK1-206ENST00000557222 ELL2O00472 640 aaPredicted RBP11.12□□□□□ -0.63
VRK1-206ENST00000557222 CTSWP56202 376 aa11.12□□□□□ -0.63
VRK1-206ENST00000557222 NEXNQ0ZGT2 675 aa11.12□□□□□ -0.63
VRK1-206ENST00000557222 DLK2Q6UY11 383 aa11.12□□□□□ -0.63
VRK1-206ENST00000557222 TTLL11Q8NHH1 800 aa11.12□□□□□ -0.63
VRK1-206ENST00000557222 CSRNP1Q96S65 589 aa11.12□□□□□ -0.63
VRK1-206ENST00000557222 MYOZ2Q9NPC6 264 aa11.12□□□□□ -0.63
VRK1-206ENST00000557222 RNF186Q9NXI6 227 aa11.12□□□□□ -0.63
VRK1-206ENST00000557222 MAP3K2Q9Y2U5 619 aa11.12□□□□□ -0.63
VRK1-206ENST00000557222 MED23Q9ULK4 1368 aa11.12□□□□□ -0.63
VRK1-206ENST00000557222 PSME4Q14997 1843 aa11.12□□□□□ -0.63
VRK1-206ENST00000557222 MYO3BQ8WXR4 1341 aa11.11□□□□□ -0.63
VRK1-206ENST00000557222 DDX11L8A8MPP1 907 aa11.11□□□□□ -0.63
VRK1-206ENST00000557222 CCDC27Q2M243 656 aa11.11□□□□□ -0.63
VRK1-206ENST00000557222 STRIP1Q5VSL9 837 aa11.11□□□□□ -0.63
VRK1-206ENST00000557222 ANGEL2Q5VTE6 544 aaKnown RBP11.11□□□□□ -0.63
VRK1-206ENST00000557222 COA1Q9GZY4 146 aa11.11□□□□□ -0.63
VRK1-206ENST00000557222 MINPP1Q9UNW1 487 aa11.11□□□□□ -0.63
VRK1-206ENST00000557222 LEMD3Q9Y2U8 911 aa11.11□□□□□ -0.63
VRK1-206ENST00000557222 AKAP11Q9UKA4 1901 aa11.1□□□□□ -0.63
VRK1-206ENST00000557222 PI4KAP2A4QPH2 592 aa11.1□□□□□ -0.63
VRK1-206ENST00000557222 H7C1W4 665 aa11.1□□□□□ -0.63
VRK1-206ENST00000557222 TNRC18O15417 2968 aaPredicted RBP11.1□□□□□ -0.63
VRK1-206ENST00000557222 TRPA1O75762 1119 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms