RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 PRMT6Q96LA8 375 aaPredicted RBP14.76□□□□□ -0.05
SYNE2-226ENST00000557084 NEUROD6Q96NK8 337 aa14.76□□□□□ -0.05
SYNE2-226ENST00000557084 DEFB129Q9H1M3 183 aa14.76□□□□□ -0.05
SYNE2-226ENST00000557084 WBP1LQ9NX94 342 aa14.76□□□□□ -0.05
SYNE2-226ENST00000557084 RCAN3Q9UKA8 241 aa14.76□□□□□ -0.05
SYNE2-226ENST00000557084 MAST3O60307 1309 aa14.75□□□□□ -0.05
SYNE2-226ENST00000557084 PNMA6EA0A0J9YXQ4 647 aa14.75□□□□□ -0.05
SYNE2-226ENST00000557084 RLBP1P12271 317 aa14.75□□□□□ -0.05
SYNE2-226ENST00000557084 CRKP46108 304 aa14.75□□□□□ -0.05
SYNE2-226ENST00000557084 CTCFP49711 727 aaPredicted RBP14.75□□□□□ -0.05
SYNE2-226ENST00000557084 TNFAIP1Q13829 316 aa14.75□□□□□ -0.05
SYNE2-226ENST00000557084 PANK1Q8TE04 598 aa14.75□□□□□ -0.05
SYNE2-226ENST00000557084 TEKT1Q969V4 418 aa14.75□□□□□ -0.05
SYNE2-226ENST00000557084 C1orf115Q9H7X2 142 aa14.75□□□□□ -0.05
SYNE2-226ENST00000557084 SUGT1Q9Y2Z0 365 aa14.75□□□□□ -0.05
SYNE2-226ENST00000557084 PCDHAC2Q9Y5I4 1007 aa14.75□□□□□ -0.05
SYNE2-226ENST00000557084 FOXN1O15353 648 aa14.74□□□□□ -0.05
SYNE2-226ENST00000557084 TIMM10P62072 90 aa14.74□□□□□ -0.05
SYNE2-226ENST00000557084 PRKG1Q13976 671 aa14.74□□□□□ -0.05
SYNE2-226ENST00000557084 ARMC9Q7Z3E5 817 aa14.74□□□□□ -0.05
SYNE2-226ENST00000557084 DENND2AQ9ULE3 1009 aa14.74□□□□□ -0.05
SYNE2-226ENST00000557084 PPP2R3BQ9Y5P8 575 aa14.74□□□□□ -0.05
SYNE2-226ENST00000557084 A0A1B0GUL7 405 aa14.73□□□□□ -0.05
SYNE2-226ENST00000557084 UBE2Q2LH0YL09 131 aa14.73□□□□□ -0.05
SYNE2-226ENST00000557084 SEMA3EO15041 775 aa14.73□□□□□ -0.05
SYNE2-226ENST00000557084 ZBTB7BO15156 539 aaPredicted RBP14.73□□□□□ -0.05
SYNE2-226ENST00000557084 ADORA1P30542 326 aa14.73□□□□□ -0.05
SYNE2-226ENST00000557084 PHKA1P46020 1223 aa14.73□□□□□ -0.05
SYNE2-226ENST00000557084 ATP8B2P98198 1209 aa14.73□□□□□ -0.05
SYNE2-226ENST00000557084 HDLBPQ00341 1268 aaKnown RBP14.73□□□□□ -0.05
SYNE2-226ENST00000557084 MVPQ14764 893 aaKnown RBP14.73□□□□□ -0.05
SYNE2-226ENST00000557084 SUPT20HL1Q3ZLR7 823 aa14.73□□□□□ -0.05
SYNE2-226ENST00000557084 TDRD3Q9H7E2 651 aaKnown RBP14.73□□□□□ -0.05
SYNE2-226ENST00000557084 TMOD2Q9NZR1 351 aa14.73□□□□□ -0.05
SYNE2-226ENST00000557084 ZNF70Q9UC06 446 aaPredicted RBP14.73□□□□□ -0.05
SYNE2-226ENST00000557084 PPP1R12BO60237 982 aaPredicted RBP14.72□□□□□ -0.05
SYNE2-226ENST00000557084 SURF6O75683 361 aaKnown RBP14.72□□□□□ -0.05
SYNE2-226ENST00000557084 LDHBP07195 334 aaKnown RBP14.72□□□□□ -0.05
SYNE2-226ENST00000557084 TNNI2P48788 182 aa14.72□□□□□ -0.05
SYNE2-226ENST00000557084 GRIK5Q16478 980 aa14.72□□□□□ -0.05
SYNE2-226ENST00000557084 SPDYE2Q495Y8 402 aa14.72□□□□□ -0.05
SYNE2-226ENST00000557084 CCDC102BQ68D86 513 aa14.72□□□□□ -0.05
SYNE2-226ENST00000557084 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.72□□□□□ -0.05
SYNE2-226ENST00000557084 XAGE2Q96GT9 111 aa14.72□□□□□ -0.05
SYNE2-226ENST00000557084 COL1A1P02452 1464 aaPredicted RBP14.71□□□□□ -0.05
SYNE2-226ENST00000557084 RASA3Q14644 834 aa14.71□□□□□ -0.05
SYNE2-226ENST00000557084 COL13A1Q5TAT6 717 aaPredicted RBP14.71□□□□□ -0.05
SYNE2-226ENST00000557084 MOB2Q70IA6 237 aa14.71□□□□□ -0.05
SYNE2-226ENST00000557084 ZGPATQ8N5A5 531 aaKnown RBP14.71□□□□□ -0.05
SYNE2-226ENST00000557084 CHMP4BQ9H444 224 aaKnown RBP14.71□□□□□ -0.05
SYNE2-226ENST00000557084 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.71□□□□□ -0.05
SYNE2-226ENST00000557084 ANGEL1Q9UNK9 670 aaKnown RBP14.71□□□□□ -0.05
SYNE2-226ENST00000557084 ZNF646O15015 1829 aaPredicted RBP14.71□□□□□ -0.06
SYNE2-226ENST00000557084 TCP10L2B9ZVM9 353 aa14.7□□□□□ -0.06
SYNE2-226ENST00000557084 CA12O43570 354 aa14.7□□□□□ -0.06
SYNE2-226ENST00000557084 LBX1P52954 281 aa14.7□□□□□ -0.06
SYNE2-226ENST00000557084 KIF23Q02241 960 aaPredicted RBP14.7□□□□□ -0.06
SYNE2-226ENST00000557084 SSH3Q8TE77 659 aa14.7□□□□□ -0.06
SYNE2-226ENST00000557084 ZDHHC15Q96MV8 337 aa14.7□□□□□ -0.06
SYNE2-226ENST00000557084 MRIQ9BWK5 157 aa14.7□□□□□ -0.06
SYNE2-226ENST00000557084 DDX19BQ9UMR2 479 aa14.7□□□□□ -0.06
SYNE2-226ENST00000557084 AOX1Q06278 1338 aa14.69□□□□□ -0.06
SYNE2-226ENST00000557084 FAM155AB1AL88 458 aaPredicted RBP14.69□□□□□ -0.06
SYNE2-226ENST00000557084 SLC10A3P09131 477 aa14.69□□□□□ -0.06
SYNE2-226ENST00000557084 RASGRF1Q13972 1273 aa14.69□□□□□ -0.06
SYNE2-226ENST00000557084 SPTY2D1Q68D10 685 aaPredicted RBP14.69□□□□□ -0.06
SYNE2-226ENST00000557084 HHIPL2Q6UWX4 724 aa14.69□□□□□ -0.06
SYNE2-226ENST00000557084 DZIP1Q86YF9 867 aaKnown RBP14.69□□□□□ -0.06
SYNE2-226ENST00000557084 TNS4Q8IZW8 715 aa14.69□□□□□ -0.06
SYNE2-226ENST00000557084 ABCF2Q9UG63 623 aa14.69□□□□□ -0.06
SYNE2-226ENST00000557084 COG6Q9Y2V7 657 aa14.69□□□□□ -0.06
SYNE2-226ENST00000557084 PAPPA2Q9BXP8 1791 aa14.68□□□□□ -0.06
SYNE2-226ENST00000557084 IREB2P48200 963 aaKnown RBP14.68□□□□□ -0.06
SYNE2-226ENST00000557084 NBPF12Q5TAG4 269 aaPredicted RBP14.68□□□□□ -0.06
SYNE2-226ENST00000557084 RASAL3Q86YV0 1011 aa14.68□□□□□ -0.06
SYNE2-226ENST00000557084 SLF2Q8IX21 1173 aa14.68□□□□□ -0.06
SYNE2-226ENST00000557084 SLC10A4Q96EP9 437 aa14.68□□□□□ -0.06
SYNE2-226ENST00000557084 ZIC5Q96T25 663 aa14.68□□□□□ -0.06
SYNE2-226ENST00000557084 PRDM10Q9NQV6 1147 aa14.68□□□□□ -0.06
SYNE2-226ENST00000557084 SALL1Q9NSC2 1324 aa14.67□□□□□ -0.06
SYNE2-226ENST00000557084 HSPA8P11142 646 aaKnown RBP14.67□□□□□ -0.06
SYNE2-226ENST00000557084 PRDX5P30044 214 aa14.67□□□□□ -0.06
SYNE2-226ENST00000557084 CACNB3P54284 484 aa14.67□□□□□ -0.06
SYNE2-226ENST00000557084 DIXDC1Q155Q3 683 aa14.67□□□□□ -0.06
SYNE2-226ENST00000557084 CCDC158Q5M9N0 1113 aa14.67□□□□□ -0.06
SYNE2-226ENST00000557084 APOBEC3HQ6NTF7 200 aaKnown RBP14.67□□□□□ -0.06
SYNE2-226ENST00000557084 CEP85Q6P2H3 762 aa14.67□□□□□ -0.06
SYNE2-226ENST00000557084 REM2Q8IYK8 340 aaPredicted RBP14.67□□□□□ -0.06
SYNE2-226ENST00000557084 YTHDC1Q96MU7 727 aaKnown RBP14.67□□□□□ -0.06
SYNE2-226ENST00000557084 TMEM39BQ9GZU3 492 aa14.67□□□□□ -0.06
SYNE2-226ENST00000557084 TSKSQ9UJT2 592 aa14.67□□□□□ -0.06
SYNE2-226ENST00000557084 HMMRO75330 724 aa14.66□□□□□ -0.06
SYNE2-226ENST00000557084 UQCRFS1P1P0C7P4 283 aa14.66□□□□□ -0.06
SYNE2-226ENST00000557084 MKRN3Q13064 507 aaKnown RBP14.66□□□□□ -0.06
SYNE2-226ENST00000557084 HSP90AB4PQ58FF6 505 aa14.66□□□□□ -0.06
SYNE2-226ENST00000557084 TNNI3KQ59H18 835 aa14.66□□□□□ -0.06
SYNE2-226ENST00000557084 TTC39AQ5SRH9 613 aa14.66□□□□□ -0.06
SYNE2-226ENST00000557084 ERC1Q8IUD2 1116 aa14.66□□□□□ -0.06
SYNE2-226ENST00000557084 SPATA5Q8NB90 893 aa14.66□□□□□ -0.06
SYNE2-226ENST00000557084 HOOK2Q96ED9 719 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms