RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 CES1P23141 567 aa6.51□□□□□ -1.37
SRP54-212ENST00000556992 MAP4P27816 1152 aaKnown RBP6.51□□□□□ -1.37
SRP54-212ENST00000556992 RXRBP28702 533 aa6.51□□□□□ -1.37
SRP54-212ENST00000556992 ITGAEP38570 1179 aa6.51□□□□□ -1.37
SRP54-212ENST00000556992 CABP4P57796 275 aa6.51□□□□□ -1.37
SRP54-212ENST00000556992 DNM1Q05193 864 aaKnown RBP6.51□□□□□ -1.37
SRP54-212ENST00000556992 ANKRD34AQ69YU3 496 aa6.51□□□□□ -1.37
SRP54-212ENST00000556992 ABI1Q8IZP0 508 aa6.51□□□□□ -1.37
SRP54-212ENST00000556992 ABTB2Q8N961 1025 aa6.51□□□□□ -1.37
SRP54-212ENST00000556992 DZANK1Q9NVP4 752 aa6.51□□□□□ -1.37
SRP54-212ENST00000556992 ADGRE2Q9UHX3 823 aa6.51□□□□□ -1.37
SRP54-212ENST00000556992 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.51□□□□□ -1.37
SRP54-212ENST00000556992 PDE2AO00408 941 aaPredicted RBP6.5□□□□□ -1.37
SRP54-212ENST00000556992 DLGAP3O95886 979 aa6.5□□□□□ -1.37
SRP54-212ENST00000556992 F13BP05160 661 aa6.5□□□□□ -1.37
SRP54-212ENST00000556992 YBX3P16989 372 aaKnown RBP eCLIP6.5□□□□□ -1.37
SRP54-212ENST00000556992 C8orf34Q49A92 452 aa6.5□□□□□ -1.37
SRP54-212ENST00000556992 PDE12Q6L8Q7 609 aaKnown RBP6.5□□□□□ -1.37
SRP54-212ENST00000556992 USP26Q9BXU7 913 aa6.5□□□□□ -1.37
SRP54-212ENST00000556992 CHRDQ9H2X0 955 aa6.5□□□□□ -1.37
SRP54-212ENST00000556992 SOX13Q9UN79 622 aa6.5□□□□□ -1.37
SRP54-212ENST00000556992 UGGT2Q9NYU1 1516 aa6.5□□□□□ -1.37
SRP54-212ENST00000556992 ADAMTS12P58397 1594 aa6.49□□□□□ -1.37
SRP54-212ENST00000556992 PHLDB1Q86UU1 1377 aa6.49□□□□□ -1.37
SRP54-212ENST00000556992 SOX1O00570 391 aaPredicted RBP6.49□□□□□ -1.37
SRP54-212ENST00000556992 DRD2P14416 443 aa6.49□□□□□ -1.37
SRP54-212ENST00000556992 OSGEPQ9NPF4 335 aa6.49□□□□□ -1.37
SRP54-212ENST00000556992 PIM2Q9P1W9 311 aa6.49□□□□□ -1.37
SRP54-212ENST00000556992 NUP160Q12769 1436 aa6.49□□□□□ -1.37
SRP54-212ENST00000556992 TIAM1Q13009 1591 aa6.48□□□□□ -1.37
SRP54-212ENST00000556992 PLEKHD1A6NEE1 506 aa6.48□□□□□ -1.37
SRP54-212ENST00000556992 C19orf57Q0VDD7 668 aa6.48□□□□□ -1.37
SRP54-212ENST00000556992 C12orf50Q8NA57 414 aaPredicted RBP6.48□□□□□ -1.37
SRP54-212ENST00000556992 CLP1Q92989 425 aaKnown RBP6.48□□□□□ -1.37
SRP54-212ENST00000556992 IQGAP2Q13576 1575 aa6.48□□□□□ -1.37
SRP54-212ENST00000556992 CCDC18Q5T9S5 1454 aa6.47□□□□□ -1.37
SRP54-212ENST00000556992 EREGO14944 169 aa6.47□□□□□ -1.37
SRP54-212ENST00000556992 ATG7O95352 703 aa6.47□□□□□ -1.37
SRP54-212ENST00000556992 PDGFAP04085 211 aa6.47□□□□□ -1.37
SRP54-212ENST00000556992 ATP2B4P23634 1241 aa6.47□□□□□ -1.37
SRP54-212ENST00000556992 MTMR3Q13615 1198 aa6.47□□□□□ -1.37
SRP54-212ENST00000556992 NFKBIBQ15653 356 aa6.47□□□□□ -1.37
SRP54-212ENST00000556992 NFXL1Q6ZNB6 911 aa6.47□□□□□ -1.37
SRP54-212ENST00000556992 VN1R5Q7Z5H4 357 aa6.47□□□□□ -1.37
SRP54-212ENST00000556992 WNT8BQ93098 351 aa6.47□□□□□ -1.37
SRP54-212ENST00000556992 OSMRQ99650 979 aa6.47□□□□□ -1.37
SRP54-212ENST00000556992 ZKSCAN3Q9BRR0 538 aa6.47□□□□□ -1.37
SRP54-212ENST00000556992 SAMD9Q5K651 1589 aa6.47□□□□□ -1.37
SRP54-212ENST00000556992 LOC100289279A0A1B0GTE1 492 aa6.46□□□□□ -1.38
SRP54-212ENST00000556992 MPSTP25325 297 aa6.46□□□□□ -1.38
SRP54-212ENST00000556992 IKBKEQ14164 716 aa6.46□□□□□ -1.38
SRP54-212ENST00000556992 NUTM2GQ5VZR2 741 aa6.46□□□□□ -1.38
SRP54-212ENST00000556992 CDPF1Q6NVV7 123 aa6.46□□□□□ -1.38
SRP54-212ENST00000556992 ASAP3Q8TDY4 903 aa6.46□□□□□ -1.38
SRP54-212ENST00000556992 FBLIM1Q8WUP2 373 aa6.46□□□□□ -1.38
SRP54-212ENST00000556992 OSBPL1AQ9BXW6 950 aa6.46□□□□□ -1.38
SRP54-212ENST00000556992 LATS2Q9NRM7 1088 aa6.46□□□□□ -1.38
SRP54-212ENST00000556992 ATG3Q9NT62 314 aa6.46□□□□□ -1.38
SRP54-212ENST00000556992 HIF3AQ9Y2N7 669 aa6.46□□□□□ -1.38
SRP54-212ENST00000556992 LEMD3Q9Y2U8 911 aa6.46□□□□□ -1.38
SRP54-212ENST00000556992 DISP1Q96F81 1524 aa6.45□□□□□ -1.38
SRP54-212ENST00000556992 EIF4G3O43432 1585 aaKnown RBP6.45□□□□□ -1.38
SRP54-212ENST00000556992 PTPRGP23470 1445 aa6.45□□□□□ -1.38
SRP54-212ENST00000556992 SETD5Q9C0A6 1442 aa6.45□□□□□ -1.38
SRP54-212ENST00000556992 ARID3CA6NKF2 412 aa6.45□□□□□ -1.38
SRP54-212ENST00000556992 METTL12A8MUP2 240 aa6.45□□□□□ -1.38
SRP54-212ENST00000556992 ADMP35318 185 aa6.45□□□□□ -1.38
SRP54-212ENST00000556992 ARL4DP49703 201 aa6.45□□□□□ -1.38
SRP54-212ENST00000556992 MSMPQ1L6U9 139 aa6.45□□□□□ -1.38
SRP54-212ENST00000556992 NXPE3Q969Y0 559 aa6.45□□□□□ -1.38
SRP54-212ENST00000556992 TMPRSS13Q9BYE2 586 aa6.45□□□□□ -1.38
SRP54-212ENST00000556992 CCDC39Q9UFE4 941 aa6.45□□□□□ -1.38
SRP54-212ENST00000556992 FOXD3Q9UJU5 478 aaPredicted RBP6.45□□□□□ -1.38
SRP54-212ENST00000556992 ANGEL1Q9UNK9 670 aaKnown RBP6.45□□□□□ -1.38
SRP54-212ENST00000556992 CLASP1Q7Z460 1538 aa6.45□□□□□ -1.38
SRP54-212ENST00000556992 PRG4Q92954 1404 aaPredicted RBP6.44□□□□□ -1.38
SRP54-212ENST00000556992 TIAF1O95411 115 aa6.44□□□□□ -1.38
SRP54-212ENST00000556992 EIF1AXP47813 144 aaKnown RBP6.44□□□□□ -1.38
SRP54-212ENST00000556992 TMEM102Q8N9M5 508 aaPredicted RBP6.44□□□□□ -1.38
SRP54-212ENST00000556992 POLIQ9UNA4 740 aa6.44□□□□□ -1.38
SRP54-212ENST00000556992 TIMELESSQ9UNS1 1208 aa6.44□□□□□ -1.38
SRP54-212ENST00000556992 EPRSP07814 1512 aaKnown RBP6.44□□□□□ -1.38
SRP54-212ENST00000556992 MYOM3Q5VTT5 1437 aa6.43□□□□□ -1.38
SRP54-212ENST00000556992 FGD6Q6ZV73 1430 aa6.43□□□□□ -1.38
SRP54-212ENST00000556992 NCOA2Q15596 1464 aa6.43□□□□□ -1.38
SRP54-212ENST00000556992 FAM95CA0A1B0GW59 222 aa6.43□□□□□ -1.38
SRP54-212ENST00000556992 MEGF11A6BM72 1044 aa6.43□□□□□ -1.38
SRP54-212ENST00000556992 FAM170BA6NMN3 283 aa6.43□□□□□ -1.38
SRP54-212ENST00000556992 FOSL1P15407 271 aa6.43□□□□□ -1.38
SRP54-212ENST00000556992 GSTM4Q03013 218 aa6.43□□□□□ -1.38
SRP54-212ENST00000556992 FZD5Q13467 585 aa6.43□□□□□ -1.38
SRP54-212ENST00000556992 COL19A1Q14993 1142 aa6.43□□□□□ -1.38
SRP54-212ENST00000556992 NOM1Q5C9Z4 860 aaKnown RBP6.43□□□□□ -1.38
SRP54-212ENST00000556992 XKR5Q6UX68 686 aa6.43□□□□□ -1.38
SRP54-212ENST00000556992 HELQQ8TDG4 1101 aa6.43□□□□□ -1.38
SRP54-212ENST00000556992 BSNDQ8WZ55 320 aa6.43□□□□□ -1.38
SRP54-212ENST00000556992 PCF11O94913 1555 aaKnown RBP6.43□□□□□ -1.38
SRP54-212ENST00000556992 MIA2Q96PC5 1412 aa6.42□□□□□ -1.38
SRP54-212ENST00000556992 USP11P51784 963 aa6.42□□□□□ -1.38
SRP54-212ENST00000556992 OGFOD2Q6N063 350 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms