RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 LDHAL6AQ6ZMR3 332 aa11.48□□□□□ -0.57
HNRNPC-227ENST00000556897 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.48□□□□□ -0.57
HNRNPC-227ENST00000556897 BRI3BPQ8WY22 251 aa11.48□□□□□ -0.57
HNRNPC-227ENST00000556897 TEPSINQ96N21 525 aa11.48□□□□□ -0.57
HNRNPC-227ENST00000556897 TMEM106CQ9BVX2 250 aa11.48□□□□□ -0.57
HNRNPC-227ENST00000556897 TMEM39BQ9GZU3 492 aa11.48□□□□□ -0.57
HNRNPC-227ENST00000556897 CNNM1Q9NRU3 951 aa11.48□□□□□ -0.57
HNRNPC-227ENST00000556897 PTCH2Q9Y6C5 1203 aa11.48□□□□□ -0.57
HNRNPC-227ENST00000556897 FAM205AQ6ZU69 1335 aa11.48□□□□□ -0.57
HNRNPC-227ENST00000556897 TRIOBPQ9H2D6 2365 aa11.48□□□□□ -0.57
HNRNPC-227ENST00000556897 FANCIQ9NVI1 1328 aa11.47□□□□□ -0.57
HNRNPC-227ENST00000556897 CCL15-CCL14A0A0B4J2E2 113 aa11.47□□□□□ -0.57
HNRNPC-227ENST00000556897 TCP10L2B9ZVM9 353 aa11.47□□□□□ -0.57
HNRNPC-227ENST00000556897 MYCP01106 439 aaPredicted RBP11.47□□□□□ -0.57
HNRNPC-227ENST00000556897 GYG1P46976 350 aa11.47□□□□□ -0.57
HNRNPC-227ENST00000556897 TAF1CQ15572 869 aaPredicted RBP11.47□□□□□ -0.57
HNRNPC-227ENST00000556897 CCL15Q16663 113 aa11.47□□□□□ -0.57
HNRNPC-227ENST00000556897 SLC9C1Q4G0N8 1177 aa11.47□□□□□ -0.57
HNRNPC-227ENST00000556897 BEND3Q5T5X7 828 aa11.47□□□□□ -0.57
HNRNPC-227ENST00000556897 DZIP1LQ8IYY4 767 aaKnown RBP11.47□□□□□ -0.57
HNRNPC-227ENST00000556897 FAM43AQ8N2R8 423 aa11.47□□□□□ -0.57
HNRNPC-227ENST00000556897 TDRD7Q8NHU6 1098 aaKnown RBP11.47□□□□□ -0.57
HNRNPC-227ENST00000556897 ZFYVE28Q9HCC9 887 aa11.47□□□□□ -0.57
HNRNPC-227ENST00000556897 SERPINA10Q9UK55 444 aa11.47□□□□□ -0.57
HNRNPC-227ENST00000556897 IL16Q14005 1332 aa11.46□□□□□ -0.57
HNRNPC-227ENST00000556897 VAMP4O75379 141 aa11.46□□□□□ -0.57
HNRNPC-227ENST00000556897 GTF2A2P52657 109 aa11.46□□□□□ -0.57
HNRNPC-227ENST00000556897 MAP3K9P80192 1104 aa11.46□□□□□ -0.57
HNRNPC-227ENST00000556897 ARHGEF6Q15052 776 aa11.46□□□□□ -0.57
HNRNPC-227ENST00000556897 SLC4A8Q2Y0W8 1093 aa11.46□□□□□ -0.57
HNRNPC-227ENST00000556897 CCDC184Q52MB2 194 aa11.46□□□□□ -0.57
HNRNPC-227ENST00000556897 NBPF11Q86T75 865 aa11.46□□□□□ -0.57
HNRNPC-227ENST00000556897 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.46□□□□□ -0.572e-14■□□□□ 9.1
HNRNPC-227ENST00000556897 OTUD5Q96G74 571 aa11.46□□□□□ -0.57
HNRNPC-227ENST00000556897 COLQQ9Y215 455 aaPredicted RBP11.46□□□□□ -0.57
HNRNPC-227ENST00000556897 SZT2Q5T011 3432 aa11.45□□□□□ -0.58
HNRNPC-227ENST00000556897 GRM8O00222 908 aa11.45□□□□□ -0.58
HNRNPC-227ENST00000556897 HIBADHP31937 336 aaKnown RBP11.45□□□□□ -0.58
HNRNPC-227ENST00000556897 CRKP46108 304 aa11.45□□□□□ -0.58
HNRNPC-227ENST00000556897 GRIK5Q16478 980 aa11.45□□□□□ -0.58
HNRNPC-227ENST00000556897 FAM84BQ96KN1 310 aaPredicted RBP11.45□□□□□ -0.58
HNRNPC-227ENST00000556897 ARHGAP39Q9C0H5 1083 aa11.45□□□□□ -0.58
HNRNPC-227ENST00000556897 RNF39Q9H2S5 420 aa11.45□□□□□ -0.58
HNRNPC-227ENST00000556897 CSADQ9Y600 493 aa11.45□□□□□ -0.58
HNRNPC-227ENST00000556897 CACNA1FO60840 1977 aa11.45□□□□□ -0.58
HNRNPC-227ENST00000556897 TNNI2P48788 182 aa11.44□□□□□ -0.58
HNRNPC-227ENST00000556897 CACNB3P54284 484 aa11.44□□□□□ -0.58
HNRNPC-227ENST00000556897 UBE4AQ14139 1066 aa11.44□□□□□ -0.58
HNRNPC-227ENST00000556897 SH3TC2Q8TF17 1288 aa11.44□□□□□ -0.58
HNRNPC-227ENST00000556897 PUS3Q9BZE2 481 aaKnown RBP11.44□□□□□ -0.58
HNRNPC-227ENST00000556897 IQSEC3Q9UPP2 1182 aaPredicted RBP11.44□□□□□ -0.58
HNRNPC-227ENST00000556897 SPDYE5A6NIY4 337 aa11.43□□□□□ -0.58
HNRNPC-227ENST00000556897 H0YGN5 161 aa11.43□□□□□ -0.58
HNRNPC-227ENST00000556897 TLR2O60603 784 aa11.43□□□□□ -0.58
HNRNPC-227ENST00000556897 LACTBP83111 547 aaPredicted RBP11.43□□□□□ -0.58
HNRNPC-227ENST00000556897 EXOSC9Q06265 439 aaKnown RBP11.43□□□□□ -0.58
HNRNPC-227ENST00000556897 C9orf78Q9NZ63 289 aaPredicted RBP11.43□□□□□ -0.58
HNRNPC-227ENST00000556897 SNCAIPQ9Y6H5 919 aa11.43□□□□□ -0.58
HNRNPC-227ENST00000556897 ZSWIM8A7E2V4 1837 aa11.42□□□□□ -0.58
HNRNPC-227ENST00000556897 RANBP2P49792 3224 aaKnown RBP11.42□□□□□ -0.58
HNRNPC-227ENST00000556897 BTBD19C9JJ37 291 aa11.42□□□□□ -0.58
HNRNPC-227ENST00000556897 IRF6O14896 467 aa11.42□□□□□ -0.58
HNRNPC-227ENST00000556897 WDHD1O75717 1129 aaPredicted RBP11.42□□□□□ -0.58
HNRNPC-227ENST00000556897 ECM2O94769 699 aaPredicted RBP11.42□□□□□ -0.58
HNRNPC-227ENST00000556897 CETPP11597 493 aa11.42□□□□□ -0.58
HNRNPC-227ENST00000556897 CHAF1AQ13111 956 aaPredicted RBP11.42□□□□□ -0.58
HNRNPC-227ENST00000556897 VPS37DQ86XT2 251 aa11.42□□□□□ -0.58
HNRNPC-227ENST00000556897 ZKSCAN4Q969J2 545 aaPredicted RBP11.42□□□□□ -0.58
HNRNPC-227ENST00000556897 WRNIP1Q96S55 665 aa11.42□□□□□ -0.58
HNRNPC-227ENST00000556897 SALL2Q9Y467 1007 aaPredicted RBP11.42□□□□□ -0.58
HNRNPC-227ENST00000556897 U3KPZ7 1027 aaPredicted RBP11.42□□□□□ -0.58
HNRNPC-227ENST00000556897 ARAP2Q8WZ64 1704 aa11.42□□□□□ -0.58
HNRNPC-227ENST00000556897 SNAPC2Q13487 334 aa11.41□□□□□ -0.58
HNRNPC-227ENST00000556897 KIF22Q14807 665 aa11.41□□□□□ -0.58
HNRNPC-227ENST00000556897 SLC4A10Q6U841 1118 aa11.41□□□□□ -0.58
HNRNPC-227ENST00000556897 FBXO33Q7Z6M2 555 aa11.41□□□□□ -0.58
HNRNPC-227ENST00000556897 ERO1BQ86YB8 467 aa11.41□□□□□ -0.58
HNRNPC-227ENST00000556897 TEKT1Q969V4 418 aa11.41□□□□□ -0.58
HNRNPC-227ENST00000556897 KAZALD1Q96I82 304 aa11.41□□□□□ -0.58
HNRNPC-227ENST00000556897 RIPOR2Q9Y4F9 1068 aa11.41□□□□□ -0.58
HNRNPC-227ENST00000556897 MROH5Q6ZUA9 1318 aa11.4□□□□□ -0.58
HNRNPC-227ENST00000556897 FRAT2O75474 233 aaPredicted RBP11.4□□□□□ -0.58
HNRNPC-227ENST00000556897 ALDH1L1O75891 902 aa11.4□□□□□ -0.58
HNRNPC-227ENST00000556897 NBPF7P0C2Y1 421 aaPredicted RBP11.4□□□□□ -0.58
HNRNPC-227ENST00000556897 HDLBPQ00341 1268 aaKnown RBP11.4□□□□□ -0.58
HNRNPC-227ENST00000556897 WDR63Q8IWG1 891 aa11.4□□□□□ -0.58
HNRNPC-227ENST00000556897 TBC1D22AQ8WUA7 517 aa11.4□□□□□ -0.58
HNRNPC-227ENST00000556897 SUCLG2Q96I99 432 aa11.4□□□□□ -0.58
HNRNPC-227ENST00000556897 ZDHHC15Q96MV8 337 aa11.4□□□□□ -0.58
HNRNPC-227ENST00000556897 ZCCHC17Q9NP64 241 aaKnown RBP11.4□□□□□ -0.58
HNRNPC-227ENST00000556897 TMOD2Q9NZR1 351 aa11.4□□□□□ -0.58
HNRNPC-227ENST00000556897 GNRH1P01148 92 aa11.39□□□□□ -0.59
HNRNPC-227ENST00000556897 CTGFP29279 349 aa11.39□□□□□ -0.59
HNRNPC-227ENST00000556897 PPIL2Q13356 520 aa11.39□□□□□ -0.59
HNRNPC-227ENST00000556897 MTFR1Q15390 333 aa11.39□□□□□ -0.59
HNRNPC-227ENST00000556897 LRRC24Q50LG9 513 aa11.39□□□□□ -0.59
HNRNPC-227ENST00000556897 CAVIN4Q5BKX8 364 aa11.39□□□□□ -0.59
HNRNPC-227ENST00000556897 APOBEC3HQ6NTF7 200 aaKnown RBP11.39□□□□□ -0.59
HNRNPC-227ENST00000556897 MIGA2Q7L4E1 593 aa11.39□□□□□ -0.59
HNRNPC-227ENST00000556897 FAM83AQ86UY5 434 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms