RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 CDAN1Q8IWY9 1227 aa5.71□□□□□ -1.5
ATXN3-242ENST00000556644 POLR3GLQ9BT43 218 aa5.71□□□□□ -1.5
ATXN3-242ENST00000556644 THUMPD2Q9BTF0 503 aaKnown RBP5.71□□□□□ -1.5
ATXN3-242ENST00000556644 GGA1Q9UJY5 639 aa5.71□□□□□ -1.5
ATXN3-242ENST00000556644 CACNA1BQ00975 2339 aa5.7□□□□□ -1.5
ATXN3-242ENST00000556644 CETPP11597 493 aa5.7□□□□□ -1.5
ATXN3-242ENST00000556644 TRIM32Q13049 653 aa5.7□□□□□ -1.5
ATXN3-242ENST00000556644 SUPT20HL1Q3ZLR7 823 aa5.7□□□□□ -1.5
ATXN3-242ENST00000556644 RTL5Q5HYW3 569 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-242ENST00000556644 ANKLE1Q8NAG6 615 aa5.7□□□□□ -1.5
ATXN3-242ENST00000556644 ZBED3Q96IU2 234 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-242ENST00000556644 UIMC1Q96RL1 719 aa5.7□□□□□ -1.5
ATXN3-242ENST00000556644 PHOX2BQ99453 314 aa5.7□□□□□ -1.5
ATXN3-242ENST00000556644 MIS18AQ9NYP9 233 aa5.7□□□□□ -1.5
ATXN3-242ENST00000556644 TRMT112Q9UI30 125 aaKnown RBP5.7□□□□□ -1.5
ATXN3-242ENST00000556644 CEMIPQ8WUJ3 1361 aa5.69□□□□□ -1.5
ATXN3-242ENST00000556644 PKD1L2Q7Z442 2459 aa5.69□□□□□ -1.5
ATXN3-242ENST00000556644 SMIM22K7EJ46 135 aa5.69□□□□□ -1.5
ATXN3-242ENST00000556644 SLC4A2P04920 1241 aa5.69□□□□□ -1.5
ATXN3-242ENST00000556644 BMP1P13497 986 aa5.69□□□□□ -1.5
ATXN3-242ENST00000556644 SMAD3P84022 425 aaKnown RBP5.69□□□□□ -1.5
ATXN3-242ENST00000556644 DLGAP5Q15398 846 aa5.69□□□□□ -1.5
ATXN3-242ENST00000556644 MCM10Q7L590 875 aa5.69□□□□□ -1.5
ATXN3-242ENST00000556644 MORC1Q86VD1 984 aa5.69□□□□□ -1.5
ATXN3-242ENST00000556644 NLRP10Q86W26 655 aa5.69□□□□□ -1.5
ATXN3-242ENST00000556644 HELBQ8NG08 1087 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-242ENST00000556644 ZNF804BA4D1E1 1349 aa5.69□□□□□ -1.5
ATXN3-242ENST00000556644 SH3TC1Q8TE82 1336 aa5.69□□□□□ -1.5
ATXN3-242ENST00000556644 UNCXA6NJT0 531 aa5.68□□□□□ -1.5
ATXN3-242ENST00000556644 F8W031 263 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-242ENST00000556644 PDHXO00330 501 aa5.68□□□□□ -1.5
ATXN3-242ENST00000556644 TNPO2O14787 897 aaKnown RBP5.68□□□□□ -1.5
ATXN3-242ENST00000556644 IRF6O14896 467 aa5.68□□□□□ -1.5
ATXN3-242ENST00000556644 GPR37L1O60883 481 aa5.68□□□□□ -1.5
ATXN3-242ENST00000556644 ANXA1P04083 346 aa5.68□□□□□ -1.5
ATXN3-242ENST00000556644 CYP2C8P10632 490 aa5.68□□□□□ -1.5
ATXN3-242ENST00000556644 MAP3K9P80192 1104 aa5.68□□□□□ -1.5
ATXN3-242ENST00000556644 SNAPC2Q13487 334 aa5.68□□□□□ -1.5
ATXN3-242ENST00000556644 DCTN1Q14203 1278 aa5.68□□□□□ -1.5
ATXN3-242ENST00000556644 RASA3Q14644 834 aa5.68□□□□□ -1.5
ATXN3-242ENST00000556644 CDCA8Q53HL2 280 aa5.68□□□□□ -1.5
ATXN3-242ENST00000556644 MICALL1Q8N3F8 863 aa5.68□□□□□ -1.5
ATXN3-242ENST00000556644 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-242ENST00000556644 GAS2L2Q8NHY3 880 aa5.68□□□□□ -1.5
ATXN3-242ENST00000556644 FBXL18Q96ME1 805 aa5.68□□□□□ -1.5
ATXN3-242ENST00000556644 GAS2L1Q99501 681 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-242ENST00000556644 PRDM12Q9H4Q4 367 aa5.68□□□□□ -1.5
ATXN3-242ENST00000556644 SEC31BQ9NQW1 1179 aa5.68□□□□□ -1.5
ATXN3-242ENST00000556644 PODXL2Q9NZ53 605 aa5.68□□□□□ -1.5
ATXN3-242ENST00000556644 PPP2R3BQ9Y5P8 575 aa5.68□□□□□ -1.5
ATXN3-242ENST00000556644 CSADQ9Y600 493 aa5.68□□□□□ -1.5
ATXN3-242ENST00000556644 SNCAIPQ9Y6H5 919 aa5.68□□□□□ -1.5
ATXN3-242ENST00000556644 SPDYE5A6NIY4 337 aa5.67□□□□□ -1.5
ATXN3-242ENST00000556644 U2AF1L5P0DN76 240 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-242ENST00000556644 BCRP11274 1271 aa5.67□□□□□ -1.5
ATXN3-242ENST00000556644 IGFBP4P22692 258 aa5.67□□□□□ -1.5
ATXN3-242ENST00000556644 DNAJB2P25686 324 aa5.67□□□□□ -1.5
ATXN3-242ENST00000556644 ATN1P54259 1190 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-242ENST00000556644 RPS8P62241 208 aaKnown RBP5.67□□□□□ -1.5
ATXN3-242ENST00000556644 U2AF1Q01081 240 aaKnown RBP eCLIP5.67□□□□□ -1.5
ATXN3-242ENST00000556644 ADGRE1Q14246 886 aa5.67□□□□□ -1.5
ATXN3-242ENST00000556644 PXYLP1Q8TE99 480 aa5.67□□□□□ -1.5
ATXN3-242ENST00000556644 ANKS1AQ92625 1134 aa5.67□□□□□ -1.5
ATXN3-242ENST00000556644 ZNF576Q9H609 170 aa5.67□□□□□ -1.5
ATXN3-242ENST00000556644 ZCCHC17Q9NP64 241 aaKnown RBP5.67□□□□□ -1.5
ATXN3-242ENST00000556644 PRDM5Q9NQX1 630 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-242ENST00000556644 BAHCC1Q9P281 2608 aa5.67□□□□□ -1.5
ATXN3-242ENST00000556644 MYO3BQ8WXR4 1341 aa5.67□□□□□ -1.5
ATXN3-242ENST00000556644 LTBP2Q14767 1821 aa5.67□□□□□ -1.5
ATXN3-242ENST00000556644 MGAMO43451 1857 aa5.66□□□□□ -1.5
ATXN3-242ENST00000556644 COL3A1P02461 1466 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-242ENST00000556644 U2SURPO15042 1029 aaKnown RBP5.66□□□□□ -1.5
ATXN3-242ENST00000556644 COL6A1P12109 1028 aa5.66□□□□□ -1.5
ATXN3-242ENST00000556644 CAPN2P17655 700 aa5.66□□□□□ -1.5
ATXN3-242ENST00000556644 FOXK2Q01167 660 aa5.66□□□□□ -1.5
ATXN3-242ENST00000556644 PROSER3Q2NL68 480 aa5.66□□□□□ -1.5
ATXN3-242ENST00000556644 CFAP100Q494V2 611 aa5.66□□□□□ -1.5
ATXN3-242ENST00000556644 AKNAD1Q5T1N1 836 aa5.66□□□□□ -1.5
ATXN3-242ENST00000556644 STRIP1Q5VSL9 837 aa5.66□□□□□ -1.5
ATXN3-242ENST00000556644 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.66□□□□□ -1.5
ATXN3-242ENST00000556644 BADQ92934 168 aa5.66□□□□□ -1.5
ATXN3-242ENST00000556644 ZKSCAN4Q969J2 545 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-242ENST00000556644 FAM89AQ96GI7 184 aa5.66□□□□□ -1.5
ATXN3-242ENST00000556644 PRMT6Q96LA8 375 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-242ENST00000556644 RNPC3Q96LT9 517 aaKnown RBP5.66□□□□□ -1.5
ATXN3-242ENST00000556644 CCDC85AQ96PX6 553 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-242ENST00000556644 HMX1Q9NP08 348 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-242ENST00000556644 PRKAG2Q9UGJ0 569 aa5.66□□□□□ -1.5
ATXN3-242ENST00000556644 OGDHLQ9ULD0 1010 aa5.66□□□□□ -1.5
ATXN3-242ENST00000556644 MYO1BO43795 1136 aa5.65□□□□□ -1.5
ATXN3-242ENST00000556644 ST18O60284 1047 aa5.65□□□□□ -1.5
ATXN3-242ENST00000556644 HMGCRP04035 888 aa5.65□□□□□ -1.5
ATXN3-242ENST00000556644 KLRK1P26718 216 aa5.65□□□□□ -1.5
ATXN3-242ENST00000556644 RBM5P52756 815 aaKnown RBP eCLIP5.65□□□□□ -1.5
ATXN3-242ENST00000556644 GTF2IP78347 998 aa5.65□□□□□ -1.5
ATXN3-242ENST00000556644 AIMP1Q12904 312 aaKnown RBP5.65□□□□□ -1.5
ATXN3-242ENST00000556644 IRF5Q13568 498 aa5.65□□□□□ -1.5
ATXN3-242ENST00000556644 SF3B3Q15393 1217 aaKnown RBP5.65□□□□□ -1.5
ATXN3-242ENST00000556644 SKIV2LQ15477 1246 aaKnown RBP5.65□□□□□ -1.5
ATXN3-242ENST00000556644 RIC3Q7Z5B4 369 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms