RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 MORC1Q86VD1 984 aa7.28□□□□□ -1.24
TDP1-215ENST00000556498 LMNTD2Q8IXW0 634 aa7.28□□□□□ -1.24
TDP1-215ENST00000556498 DRC7Q8IY82 874 aa7.28□□□□□ -1.24
TDP1-215ENST00000556498 ANKRD20A12PQ8NF67 263 aa7.28□□□□□ -1.24
TDP1-215ENST00000556498 ZBTB9Q96C00 473 aa7.28□□□□□ -1.24
TDP1-215ENST00000556498 PAGR1Q9BTK6 254 aa7.28□□□□□ -1.24
TDP1-215ENST00000556498 SEZ6LQ9BYH1 1024 aa7.28□□□□□ -1.24
TDP1-215ENST00000556498 INO80BQ9C086 356 aaPredicted RBP7.28□□□□□ -1.24
TDP1-215ENST00000556498 TUT1Q9H6E5 874 aaKnown RBP7.28□□□□□ -1.24
TDP1-215ENST00000556498 STIM2Q9P246 746 aa7.28□□□□□ -1.24
TDP1-215ENST00000556498 KLHL42Q9P2K6 505 aa7.28□□□□□ -1.24
TDP1-215ENST00000556498 KANK1Q14678 1352 aa7.28□□□□□ -1.24
TDP1-215ENST00000556498 BICRAQ9NZM4 1560 aa7.28□□□□□ -1.24
TDP1-215ENST00000556498 A0A1B0GTH6 734 aa7.27□□□□□ -1.25
TDP1-215ENST00000556498 ERICH4A6NGS2 130 aa7.27□□□□□ -1.25
TDP1-215ENST00000556498 MAN1A2O60476 641 aa7.27□□□□□ -1.25
TDP1-215ENST00000556498 CAND2O75155 1236 aa7.27□□□□□ -1.25
TDP1-215ENST00000556498 STIP1P31948 543 aaKnown RBP7.27□□□□□ -1.25
TDP1-215ENST00000556498 RBM5P52756 815 aaKnown RBP eCLIP7.27□□□□□ -1.25
TDP1-215ENST00000556498 ICA1Q05084 483 aa7.27□□□□□ -1.25
TDP1-215ENST00000556498 DNAJC21Q5F1R6 531 aaKnown RBP7.27□□□□□ -1.25
TDP1-215ENST00000556498 LARP1BQ659C4 914 aaKnown RBP7.27□□□□□ -1.25
TDP1-215ENST00000556498 CCDC174Q6PII3 467 aa7.27□□□□□ -1.25
TDP1-215ENST00000556498 NFXL1Q6ZNB6 911 aa7.27□□□□□ -1.25
TDP1-215ENST00000556498 GLYCTKQ8IVS8 523 aa7.27□□□□□ -1.25
TDP1-215ENST00000556498 MYRIPQ8NFW9 859 aa7.27□□□□□ -1.25
TDP1-215ENST00000556498 HDAC7Q8WUI4 952 aa7.27□□□□□ -1.25
TDP1-215ENST00000556498 CDK5RAP3Q96JB5 506 aa7.27□□□□□ -1.25
TDP1-215ENST00000556498 SENP2Q9HC62 589 aa7.27□□□□□ -1.25
TDP1-215ENST00000556498 R3HCC1Q9Y3T6 440 aaKnown RBP7.27□□□□□ -1.25
TDP1-215ENST00000556498 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.27□□□□□ -1.25
TDP1-215ENST00000556498 SCINQ9Y6U3 715 aa7.27□□□□□ -1.25
TDP1-215ENST00000556498 RSF1Q96T23 1441 aaPredicted RBP7.27□□□□□ -1.25
TDP1-215ENST00000556498 SMARCA2P51531 1590 aa7.26□□□□□ -1.25
TDP1-215ENST00000556498 BAZ1AQ9NRL2 1556 aaPredicted RBP7.26□□□□□ -1.25
TDP1-215ENST00000556498 DHX29Q7Z478 1369 aaKnown RBP7.26□□□□□ -1.25
TDP1-215ENST00000556498 FAM13AO94988 1023 aa7.26□□□□□ -1.25
TDP1-215ENST00000556498 MSL3P1P0C860 447 aa7.26□□□□□ -1.25
TDP1-215ENST00000556498 TATP17735 454 aaPredicted RBP7.26□□□□□ -1.25
TDP1-215ENST00000556498 RPL17P18621 184 aaKnown RBP7.26□□□□□ -1.25
TDP1-215ENST00000556498 ATP4AP20648 1035 aa7.26□□□□□ -1.25
TDP1-215ENST00000556498 MSX1P28360 303 aa7.26□□□□□ -1.25
TDP1-215ENST00000556498 MAN1A1P33908 653 aa7.26□□□□□ -1.25
TDP1-215ENST00000556498 RDXP35241 583 aaKnown RBP7.26□□□□□ -1.25
TDP1-215ENST00000556498 NUCB2P80303 420 aa7.26□□□□□ -1.25
TDP1-215ENST00000556498 DGKZQ13574 1117 aa7.26□□□□□ -1.25
TDP1-215ENST00000556498 ZNF394Q53GI3 561 aa7.26□□□□□ -1.25
TDP1-215ENST00000556498 MUM1L1Q5H9M0 696 aa7.26□□□□□ -1.25
TDP1-215ENST00000556498 MCTP2Q6DN12 878 aa7.26□□□□□ -1.25
TDP1-215ENST00000556498 PPP1R9BQ96SB3 815 aa7.26□□□□□ -1.25
TDP1-215ENST00000556498 TRIM7Q9C029 511 aa7.26□□□□□ -1.25
TDP1-215ENST00000556498 TMOD4Q9NZQ9 345 aa7.26□□□□□ -1.25
TDP1-215ENST00000556498 KLK14Q9P0G3 267 aa7.26□□□□□ -1.25
TDP1-215ENST00000556498 CCDC39Q9UFE4 941 aa7.26□□□□□ -1.25
TDP1-215ENST00000556498 DYRK1BQ9Y463 629 aa7.26□□□□□ -1.25
TDP1-215ENST00000556498 IKBKGQ9Y6K9 419 aa7.26□□□□□ -1.25
TDP1-215ENST00000556498 NCAPD3P42695 1498 aa7.25□□□□□ -1.25
TDP1-215ENST00000556498 PABPN1LA6NDY0 278 aaKnown RBP7.25□□□□□ -1.25
TDP1-215ENST00000556498 REC8O95072 547 aa7.25□□□□□ -1.25
TDP1-215ENST00000556498 SLFN14P0C7P3 912 aa7.25□□□□□ -1.25
TDP1-215ENST00000556498 PRPHP41219 470 aa7.25□□□□□ -1.25
TDP1-215ENST00000556498 ARHGAP4P98171 946 aa7.25□□□□□ -1.25
TDP1-215ENST00000556498 XPCQ01831 940 aaPredicted RBP7.25□□□□□ -1.25
TDP1-215ENST00000556498 CCDC15Q0P6D6 951 aa7.25□□□□□ -1.25
TDP1-215ENST00000556498 MLECQ14165 292 aa7.25□□□□□ -1.25
TDP1-215ENST00000556498 PDIA5Q14554 519 aa7.25□□□□□ -1.25
TDP1-215ENST00000556498 RBBP5Q15291 538 aaKnown RBP7.25□□□□□ -1.25
TDP1-215ENST00000556498 CCDC70Q6NSX1 233 aa7.25□□□□□ -1.25
TDP1-215ENST00000556498 KIFC2Q96AC6 838 aa7.25□□□□□ -1.25
TDP1-215ENST00000556498 CEP63Q96MT8 703 aa7.25□□□□□ -1.25
TDP1-215ENST00000556498 CDC5LQ99459 802 aaKnown RBP7.25□□□□□ -1.25
TDP1-215ENST00000556498 SLX1AQ9BQ83 275 aa7.25□□□□□ -1.25
TDP1-215ENST00000556498 BIN2Q9UBW5 565 aaPredicted RBP7.25□□□□□ -1.25
TDP1-215ENST00000556498 NOL7Q9UMY1 257 aaKnown RBP7.25□□□□□ -1.25
TDP1-215ENST00000556498 GPC6Q9Y625 555 aaPredicted RBP7.25□□□□□ -1.25
TDP1-215ENST00000556498 SENP3-EIF4A1A0A087X0R7 540 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 SOBPA7XYQ1 873 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 ERLIN1O75477 346 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 TRIM37O94972 964 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 F11P03951 625 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 MPSTP25325 297 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 ALDH1B1P30837 517 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 SFSWAPQ12872 951 aaKnown RBP7.24□□□□□ -1.25
TDP1-215ENST00000556498 E2F5Q15329 346 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 SYCP1Q15431 976 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 TERF2Q15554 542 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 FAM26DQ5JW98 314 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 Q6ZNB5 142 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 ZNF662Q6ZS27 426 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 NCAPG2Q86XI2 1143 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 TTC30BQ8N4P2 665 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.24□□□□□ -1.25
TDP1-215ENST00000556498 DRAXINQ8NBI3 349 aaPredicted RBP7.24□□□□□ -1.25
TDP1-215ENST00000556498 RHPN1Q8TCX5 695 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 STAG1Q8WVM7 1258 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 KLRG1Q96E93 195 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 IFT43Q96FT9 208 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 MPP4Q96JB8 637 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 TRIM47Q96LD4 638 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 ZIC5Q96T25 663 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms