RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 EGFL7Q9UHF1 273 aa7.68□□□□□ -1.18
SCFD1-219ENST00000556413 EIF4EBP3O60516 100 aaPredicted RBP7.67□□□□□ -1.18
SCFD1-219ENST00000556413 SOX4Q06945 474 aaPredicted RBP7.67□□□□□ -1.18
SCFD1-219ENST00000556413 ECM1Q16610 540 aa7.67□□□□□ -1.18
SCFD1-219ENST00000556413 SPRED3Q2MJR0 410 aa7.67□□□□□ -1.18
SCFD1-219ENST00000556413 USPL1Q5W0Q7 1092 aa7.67□□□□□ -1.18
SCFD1-219ENST00000556413 LIN7BQ9HAP6 207 aa7.67□□□□□ -1.18
SCFD1-219ENST00000556413 LEMD3Q9Y2U8 911 aa7.67□□□□□ -1.18
SCFD1-219ENST00000556413 CTSBP07858 339 aa7.66□□□□□ -1.18
SCFD1-219ENST00000556413 MAOBP27338 520 aa7.66□□□□□ -1.18
SCFD1-219ENST00000556413 PAOXQ6QHF9 649 aa7.66□□□□□ -1.18
SCFD1-219ENST00000556413 EZH1Q92800 747 aaPredicted RBP7.66□□□□□ -1.18
SCFD1-219ENST00000556413 FMNL2Q96PY5 1086 aa7.66□□□□□ -1.18
SCFD1-219ENST00000556413 OSBPL1AQ9BXW6 950 aa7.66□□□□□ -1.18
SCFD1-219ENST00000556413 ADH5P11766 374 aa7.65□□□□□ -1.18
SCFD1-219ENST00000556413 FOSL1P15407 271 aa7.65□□□□□ -1.18
SCFD1-219ENST00000556413 ADMP35318 185 aa7.65□□□□□ -1.18
SCFD1-219ENST00000556413 SERPINB4P48594 390 aa7.65□□□□□ -1.18
SCFD1-219ENST00000556413 BRPF3Q9ULD4 1205 aa7.65□□□□□ -1.18
SCFD1-219ENST00000556413 USTQ9Y2C2 406 aa7.65□□□□□ -1.18
SCFD1-219ENST00000556413 H3BRB1 525 aa7.64□□□□□ -1.19
SCFD1-219ENST00000556413 CYP11A1P05108 521 aa7.64□□□□□ -1.19
SCFD1-219ENST00000556413 CPSF6Q16630 551 aaKnown RBP eCLIP7.64□□□□□ -1.19
SCFD1-219ENST00000556413 MSMPQ1L6U9 139 aa7.64□□□□□ -1.19
SCFD1-219ENST00000556413 KIAA0319Q5VV43 1072 aa7.64□□□□□ -1.19
SCFD1-219ENST00000556413 TUT1Q9H6E5 874 aaKnown RBP7.64□□□□□ -1.19
SCFD1-219ENST00000556413 POU4F3Q15319 338 aa7.63□□□□□ -1.19
SCFD1-219ENST00000556413 GLYCTKQ8IVS8 523 aa7.63□□□□□ -1.19
SCFD1-219ENST00000556413 TRIM56Q9BRZ2 755 aaKnown RBP7.63□□□□□ -1.19
SCFD1-219ENST00000556413 YIPF2Q9BWQ6 316 aa7.63□□□□□ -1.19
SCFD1-219ENST00000556413 PRKAG2Q9UGJ0 569 aa7.63□□□□□ -1.19
SCFD1-219ENST00000556413 ADGRE2Q9UHX3 823 aa7.63□□□□□ -1.19
SCFD1-219ENST00000556413 ACTL7BQ9Y614 415 aa7.63□□□□□ -1.19
SCFD1-219ENST00000556413 ECEL1O95672 775 aa7.62□□□□□ -1.19
SCFD1-219ENST00000556413 TXKP42681 527 aa7.62□□□□□ -1.19
SCFD1-219ENST00000556413 ARHGAP4P98171 946 aa7.62□□□□□ -1.19
SCFD1-219ENST00000556413 ORC1Q13415 861 aa7.62□□□□□ -1.19
SCFD1-219ENST00000556413 B4GALNT3Q6L9W6 998 aa7.62□□□□□ -1.19
SCFD1-219ENST00000556413 ZAR1Q86SH2 424 aa7.62□□□□□ -1.19
SCFD1-219ENST00000556413 GATA6Q92908 595 aa7.62□□□□□ -1.19
SCFD1-219ENST00000556413 TBC1D32Q96NH3 1257 aa7.62□□□□□ -1.19
SCFD1-219ENST00000556413 METTL22Q9BUU2 404 aaPredicted RBP7.62□□□□□ -1.19
SCFD1-219ENST00000556413 B3GALT4O96024 378 aa7.61□□□□□ -1.19
SCFD1-219ENST00000556413 NEFLP07196 543 aa7.61□□□□□ -1.19
SCFD1-219ENST00000556413 NFICP08651 508 aa7.61□□□□□ -1.19
SCFD1-219ENST00000556413 ZNF576Q9H609 170 aa7.61□□□□□ -1.19
SCFD1-219ENST00000556413 CCDC39Q9UFE4 941 aa7.61□□□□□ -1.19
SCFD1-219ENST00000556413 FAM170BA6NMN3 283 aa7.6□□□□□ -1.19
SCFD1-219ENST00000556413 NDUFB5O43674 189 aa7.6□□□□□ -1.19
SCFD1-219ENST00000556413 PRNPP04156 253 aa7.6□□□□□ -1.19
SCFD1-219ENST00000556413 ITPKAP23677 461 aa7.6□□□□□ -1.19
SCFD1-219ENST00000556413 AKAP4Q5JQC9 854 aa7.6□□□□□ -1.19
SCFD1-219ENST00000556413 HP1BP3Q5SSJ5 553 aaPredicted RBP7.6□□□□□ -1.19
SCFD1-219ENST00000556413 NFXL1Q6ZNB6 911 aa7.6□□□□□ -1.19
SCFD1-219ENST00000556413 DYMQ7RTS9 669 aa7.6□□□□□ -1.19
SCFD1-219ENST00000556413 ABI1Q8IZP0 508 aa7.6□□□□□ -1.19
SCFD1-219ENST00000556413 FAM129BQ96TA1 746 aa7.6□□□□□ -1.19
SCFD1-219ENST00000556413 CORO1BQ9BR76 489 aa7.6□□□□□ -1.19
SCFD1-219ENST00000556413 EHD4Q9H223 541 aa7.6□□□□□ -1.19
SCFD1-219ENST00000556413 NPHS2Q9NP85 383 aa7.6□□□□□ -1.19
SCFD1-219ENST00000556413 FAM105AQ9NUU6 356 aa7.6□□□□□ -1.19
SCFD1-219ENST00000556413 ANGEL1Q9UNK9 670 aaKnown RBP7.6□□□□□ -1.19
SCFD1-219ENST00000556413 CYP26A1O43174 497 aa7.59□□□□□ -1.19
SCFD1-219ENST00000556413 CPNE3O75131 537 aaKnown RBP7.59□□□□□ -1.19
SCFD1-219ENST00000556413 RAB6AP20340 208 aa7.59□□□□□ -1.19
SCFD1-219ENST00000556413 PDE3BQ13370 1112 aa7.59□□□□□ -1.19
SCFD1-219ENST00000556413 MAP7Q14244 749 aa7.59□□□□□ -1.19
SCFD1-219ENST00000556413 DDX54Q8TDD1 881 aaKnown RBP7.59□□□□□ -1.19
SCFD1-219ENST00000556413 SEMA6CQ9H3T2 930 aa7.59□□□□□ -1.19
SCFD1-219ENST00000556413 ACSS3Q9H6R3 686 aa7.59□□□□□ -1.19
SCFD1-219ENST00000556413 ZFYVE1Q9HBF4 777 aa7.59□□□□□ -1.19
SCFD1-219ENST00000556413 RAD18Q9NS91 495 aa7.59□□□□□ -1.19
SCFD1-219ENST00000556413 RNF114Q9Y508 228 aa7.59□□□□□ -1.19
SCFD1-219ENST00000556413 GSX1Q9H4S2 264 aaPredicted RBP7.58□□□□□ -1.2
SCFD1-219ENST00000556413 AP4E1Q9UPM8 1137 aa7.58□□□□□ -1.2
SCFD1-219ENST00000556413 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.57□□□□□ -1.2
SCFD1-219ENST00000556413 IGHA2P01877 340 aa7.57□□□□□ -1.2
SCFD1-219ENST00000556413 PTPN12Q05209 780 aaKnown RBP7.57□□□□□ -1.2
SCFD1-219ENST00000556413 VSIG10LQ86VR7 867 aa7.57□□□□□ -1.2
SCFD1-219ENST00000556413 CITED4Q96RK1 184 aa7.57□□□□□ -1.2
SCFD1-219ENST00000556413 KRTAP9-9Q9BYP9 154 aa7.57□□□□□ -1.2
SCFD1-219ENST00000556413 KRTAP9-4Q9BYQ2 154 aa7.57□□□□□ -1.2
SCFD1-219ENST00000556413 ABCB6Q9NP58 842 aa7.57□□□□□ -1.2
SCFD1-219ENST00000556413 EIF1AYO14602 144 aaKnown RBP7.56□□□□□ -1.2
SCFD1-219ENST00000556413 GPR182O15218 404 aa7.56□□□□□ -1.2
SCFD1-219ENST00000556413 AOC2O75106 756 aa7.56□□□□□ -1.2
SCFD1-219ENST00000556413 ASPAP45381 313 aa7.56□□□□□ -1.2
SCFD1-219ENST00000556413 DUSP27Q5VZP5 1158 aa7.56□□□□□ -1.2
SCFD1-219ENST00000556413 SEZ6L2Q6UXD5 910 aa7.56□□□□□ -1.2
SCFD1-219ENST00000556413 ZNF765Q7L2R6 523 aa7.56□□□□□ -1.2
SCFD1-219ENST00000556413 C14orf37Q86TY3 774 aa7.56□□□□□ -1.2
SCFD1-219ENST00000556413 TXNDC2Q86VQ3 553 aa7.56□□□□□ -1.2
SCFD1-219ENST00000556413 CCDC74AQ96AQ1 378 aa7.56□□□□□ -1.2
SCFD1-219ENST00000556413 WDR18Q9BV38 432 aa7.56□□□□□ -1.2
SCFD1-219ENST00000556413 BSDC1Q9NW68 430 aaPredicted RBP7.56□□□□□ -1.2
SCFD1-219ENST00000556413 PDE3AQ14432 1141 aa7.55□□□□□ -1.2
SCFD1-219ENST00000556413 PRPF40BQ6NWY9 871 aaKnown RBP7.55□□□□□ -1.2
SCFD1-219ENST00000556413 FBXL18Q96ME1 805 aa7.55□□□□□ -1.2
SCFD1-219ENST00000556413 NIF3L1Q9GZT8 377 aa7.55□□□□□ -1.2
SCFD1-219ENST00000556413 DNAJC25Q9H1X3 360 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms