RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 CTNNA3Q9UI47 895 aa11.05□□□□□ -0.64
ACTN1-218ENST00000556343 JAG2Q9Y219 1238 aa11.05□□□□□ -0.64
ACTN1-218ENST00000556343 CCDC171Q6TFL3 1326 aa11.05□□□□□ -0.64
ACTN1-218ENST00000556343 SNED1Q8TER0 1413 aa11.04□□□□□ -0.64
ACTN1-218ENST00000556343 A0A0D9SFI3 127 aa11.04□□□□□ -0.64
ACTN1-218ENST00000556343 VIL1P09327 827 aaKnown RBP11.04□□□□□ -0.64
ACTN1-218ENST00000556343 PLCG2P16885 1265 aa11.04□□□□□ -0.64
ACTN1-218ENST00000556343 PRDX5P30044 214 aa11.04□□□□□ -0.64
ACTN1-218ENST00000556343 HDLBPQ00341 1268 aaKnown RBP11.04□□□□□ -0.64
ACTN1-218ENST00000556343 DACT2Q5SW24 774 aa11.04□□□□□ -0.64
ACTN1-218ENST00000556343 RNF20Q5VTR2 975 aa11.04□□□□□ -0.64
ACTN1-218ENST00000556343 RSBN1LQ6PCB5 846 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-218ENST00000556343 OGFOD1Q8N543 542 aa11.04□□□□□ -0.64
ACTN1-218ENST00000556343 AGBL3Q8NEM8 1001 aa11.04□□□□□ -0.64
ACTN1-218ENST00000556343 FAM163AQ96GL9 167 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-218ENST00000556343 NACAP1Q9BZK3 213 aa11.04□□□□□ -0.64
ACTN1-218ENST00000556343 TCRBV5S4A2TA0A5A2 114 aa11.03□□□□□ -0.64
ACTN1-218ENST00000556343 RAD17O75943 681 aa11.03□□□□□ -0.64
ACTN1-218ENST00000556343 APPP05067 770 aa11.03□□□□□ -0.64
ACTN1-218ENST00000556343 RPS12P25398 132 aaKnown RBP11.03□□□□□ -0.64
ACTN1-218ENST00000556343 RASSF7Q02833 373 aa11.03□□□□□ -0.64
ACTN1-218ENST00000556343 HHIPL2Q6UWX4 724 aa11.03□□□□□ -0.64
ACTN1-218ENST00000556343 OSBP2Q969R2 916 aa11.03□□□□□ -0.64
ACTN1-218ENST00000556343 TEKT1Q969V4 418 aa11.03□□□□□ -0.64
ACTN1-218ENST00000556343 DSCC1Q9BVC3 393 aa11.03□□□□□ -0.64
ACTN1-218ENST00000556343 USP26Q9BXU7 913 aa11.03□□□□□ -0.64
ACTN1-218ENST00000556343 C22orf23Q9BZE7 217 aa11.03□□□□□ -0.64
ACTN1-218ENST00000556343 CRNKL1Q9BZJ0 848 aaKnown RBP11.03□□□□□ -0.64
ACTN1-218ENST00000556343 TTF2Q9UNY4 1162 aaKnown RBP11.03□□□□□ -0.64
ACTN1-218ENST00000556343 U3KPZ7 1027 aaPredicted RBP11.03□□□□□ -0.64
ACTN1-218ENST00000556343 RPAP1Q9BWH6 1393 aaPredicted RBP11.03□□□□□ -0.64
ACTN1-218ENST00000556343 LTBP1Q14766 1721 aa11.02□□□□□ -0.65
ACTN1-218ENST00000556343 PATL2C9JE40 543 aaKnown RBP11.02□□□□□ -0.65
ACTN1-218ENST00000556343 F8W031 263 aaPredicted RBP11.02□□□□□ -0.65
ACTN1-218ENST00000556343 GPAA1O43292 621 aa11.02□□□□□ -0.65
ACTN1-218ENST00000556343 ZKSCAN1P17029 563 aaPredicted RBP11.02□□□□□ -0.65
ACTN1-218ENST00000556343 AMOTL1Q8IY63 956 aa11.02□□□□□ -0.65
ACTN1-218ENST00000556343 IL27Q8NEV9 243 aa11.02□□□□□ -0.65
ACTN1-218ENST00000556343 PUS7LQ9H0K6 701 aaKnown RBP11.02□□□□□ -0.65
ACTN1-218ENST00000556343 SLC4A4Q9Y6R1 1079 aa11.02□□□□□ -0.65
ACTN1-218ENST00000556343 A0A1B0GUL6 1792 aa11.02□□□□□ -0.65
ACTN1-218ENST00000556343 DUOX1Q9NRD9 1551 aa11.02□□□□□ -0.65
ACTN1-218ENST00000556343 KIAA1551Q9HCM1 1747 aa11.01□□□□□ -0.65
ACTN1-218ENST00000556343 COL1A1P02452 1464 aaPredicted RBP11.01□□□□□ -0.65
ACTN1-218ENST00000556343 YDJCA8MPS7 323 aa11.01□□□□□ -0.65
ACTN1-218ENST00000556343 M0R2C6 588 aa11.01□□□□□ -0.65
ACTN1-218ENST00000556343 FZD9O00144 591 aa11.01□□□□□ -0.65
ACTN1-218ENST00000556343 PSMD14O00487 310 aa11.01□□□□□ -0.65
ACTN1-218ENST00000556343 MBD4O95243 580 aa11.01□□□□□ -0.65
ACTN1-218ENST00000556343 SEC24BO95487 1268 aa11.01□□□□□ -0.65
ACTN1-218ENST00000556343 RBM5P52756 815 aaKnown RBP eCLIP11.01□□□□□ -0.65
ACTN1-218ENST00000556343 PPP4CP60510 307 aa11.01□□□□□ -0.65
ACTN1-218ENST00000556343 CXCL9Q07325 125 aa11.01□□□□□ -0.65
ACTN1-218ENST00000556343 GIMAP6Q6P9H5 292 aa11.01□□□□□ -0.65
ACTN1-218ENST00000556343 KIAA0825Q8IV33 1275 aa11.01□□□□□ -0.65
ACTN1-218ENST00000556343 MIGA1Q8NAN2 632 aa11.01□□□□□ -0.65
ACTN1-218ENST00000556343 MAP4K1Q92918 833 aa11.01□□□□□ -0.65
ACTN1-218ENST00000556343 STRBPQ96SI9 672 aaKnown RBP11.01□□□□□ -0.65
ACTN1-218ENST00000556343 SEC62Q99442 399 aaKnown RBP11.01□□□□□ -0.65
ACTN1-218ENST00000556343 LSG1Q9H089 658 aaKnown RBP11.01□□□□□ -0.65
ACTN1-218ENST00000556343 SERPINA10Q9UK55 444 aa11.01□□□□□ -0.65
ACTN1-218ENST00000556343 CACNA1SQ13698 1873 aa11.01□□□□□ -0.65
ACTN1-218ENST00000556343 MROH7-TTC4A0A0A0MT08 1334 aa11.01□□□□□ -0.65
ACTN1-218ENST00000556343 GPR75-ASB3A0A0A6YYF3 556 aa11□□□□□ -0.65
ACTN1-218ENST00000556343 USP17L8P0C7I0 530 aa11□□□□□ -0.65
ACTN1-218ENST00000556343 HSPD1P10809 573 aaKnown RBP11□□□□□ -0.65
ACTN1-218ENST00000556343 YBX3P16989 372 aaKnown RBP eCLIP11□□□□□ -0.65
ACTN1-218ENST00000556343 USP5P45974 858 aa11□□□□□ -0.65
ACTN1-218ENST00000556343 CRKP46108 304 aa11□□□□□ -0.65
ACTN1-218ENST00000556343 DPY19L2Q6NUT2 758 aa11□□□□□ -0.65
ACTN1-218ENST00000556343 CCDC129Q6ZRS4 1044 aa11□□□□□ -0.65
ACTN1-218ENST00000556343 ZNF589Q86UQ0 364 aaPredicted RBP11□□□□□ -0.65
ACTN1-218ENST00000556343 CERS5Q8N5B7 392 aa11□□□□□ -0.65
ACTN1-218ENST00000556343 DPF2Q92785 391 aa11□□□□□ -0.65
ACTN1-218ENST00000556343 ARMT1Q9H993 441 aa11□□□□□ -0.65
ACTN1-218ENST00000556343 KCNQ5Q9NR82 932 aa11□□□□□ -0.65
ACTN1-218ENST00000556343 ATP8A2Q9NTI2 1148 aa11□□□□□ -0.65
ACTN1-218ENST00000556343 AATFQ9NY61 560 aaKnown RBP eCLIP11□□□□□ -0.65
ACTN1-218ENST00000556343 RNF181Q9P0P0 153 aa11□□□□□ -0.65
ACTN1-218ENST00000556343 AKAP11Q9UKA4 1901 aa10.99□□□□□ -0.65
ACTN1-218ENST00000556343 H7C1D1 291 aa10.99□□□□□ -0.65
ACTN1-218ENST00000556343 MYO1BO43795 1136 aa10.99□□□□□ -0.65
ACTN1-218ENST00000556343 BTDP43251 543 aa10.99□□□□□ -0.65
ACTN1-218ENST00000556343 TDO2P48775 406 aa10.99□□□□□ -0.65
ACTN1-218ENST00000556343 RBM25P49756 843 aaKnown RBP10.99□□□□□ -0.65
ACTN1-218ENST00000556343 ANAPC15P60006 121 aa10.99□□□□□ -0.65
ACTN1-218ENST00000556343 KRT32Q14532 448 aa10.99□□□□□ -0.65
ACTN1-218ENST00000556343 DLGAP5Q15398 846 aa10.99□□□□□ -0.65
ACTN1-218ENST00000556343 DIXDC1Q155Q3 683 aa10.99□□□□□ -0.65
ACTN1-218ENST00000556343 ALX1Q15699 326 aa10.99□□□□□ -0.65
ACTN1-218ENST00000556343 IMMTQ16891 758 aaKnown RBP10.99□□□□□ -0.65
ACTN1-218ENST00000556343 SLFNL1Q499Z3 407 aa10.99□□□□□ -0.65
ACTN1-218ENST00000556343 ZDHHC15Q96MV8 337 aa10.99□□□□□ -0.65
ACTN1-218ENST00000556343 TBC1D32Q96NH3 1257 aa10.99□□□□□ -0.65
ACTN1-218ENST00000556343 MXD3Q9BW11 206 aa10.99□□□□□ -0.65
ACTN1-218ENST00000556343 NAPBQ9H115 298 aa10.99□□□□□ -0.65
ACTN1-218ENST00000556343 TMOD2Q9NZR1 351 aa10.99□□□□□ -0.65
ACTN1-218ENST00000556343 RBM8AQ9Y5S9 174 aaKnown RBP10.99□□□□□ -0.65
ACTN1-218ENST00000556343 GJA3Q9Y6H8 435 aa10.99□□□□□ -0.65
ACTN1-218ENST00000556343 GAKO14976 1311 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms