RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 NUP153P49790 1475 aaKnown RBP6.19□□□□□ -1.42
ATXN3-240ENST00000556339 ABCA9Q8IUA7 1624 aa6.18□□□□□ -1.42
ATXN3-240ENST00000556339 POGZQ7Z3K3 1410 aa6.18□□□□□ -1.42
ATXN3-240ENST00000556339 KIAA1324LA8MWY0 1029 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-240ENST00000556339 ADAM11O75078 769 aa6.18□□□□□ -1.42
ATXN3-240ENST00000556339 RXRBP28702 533 aa6.18□□□□□ -1.42
ATXN3-240ENST00000556339 AAMPQ13685 434 aa6.18□□□□□ -1.42
ATXN3-240ENST00000556339 ADAMTSL4Q6UY14 1074 aa6.18□□□□□ -1.42
ATXN3-240ENST00000556339 BEND4Q6ZU67 534 aa6.18□□□□□ -1.42
ATXN3-240ENST00000556339 CLEC10AQ8IUN9 316 aa6.18□□□□□ -1.42
ATXN3-240ENST00000556339 FAM20CQ8IXL6 584 aa6.18□□□□□ -1.42
ATXN3-240ENST00000556339 WNT8BQ93098 351 aa6.18□□□□□ -1.42
ATXN3-240ENST00000556339 PBXIP1Q96AQ6 731 aa6.18□□□□□ -1.42
ATXN3-240ENST00000556339 ADAM19Q9H013 955 aa6.18□□□□□ -1.42
ATXN3-240ENST00000556339 GOLGA2P5Q9HBQ8 144 aa6.18□□□□□ -1.42
ATXN3-240ENST00000556339 FMN1Q68DA7 1419 aa6.17□□□□□ -1.42
ATXN3-240ENST00000556339 SCAPERQ9BY12 1400 aa6.17□□□□□ -1.42
ATXN3-240ENST00000556339 FANCAO15360 1455 aa6.17□□□□□ -1.42
ATXN3-240ENST00000556339 PDE2AO00408 941 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-240ENST00000556339 MED26O95402 600 aa6.17□□□□□ -1.42
ATXN3-240ENST00000556339 TXKP42681 527 aa6.17□□□□□ -1.42
ATXN3-240ENST00000556339 PREPP48147 710 aa6.17□□□□□ -1.42
ATXN3-240ENST00000556339 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-240ENST00000556339 C1orf127Q8N9H9 656 aa6.17□□□□□ -1.42
ATXN3-240ENST00000556339 GIMAP7Q8NHV1 300 aa6.17□□□□□ -1.42
ATXN3-240ENST00000556339 PMEPA1Q969W9 287 aa6.17□□□□□ -1.42
ATXN3-240ENST00000556339 KRTAP4-12Q9BQ66 201 aa6.17□□□□□ -1.42
ATXN3-240ENST00000556339 OSGEPQ9NPF4 335 aa6.17□□□□□ -1.42
ATXN3-240ENST00000556339 CNTN3Q9P232 1028 aa6.17□□□□□ -1.42
ATXN3-240ENST00000556339 OAS3Q9Y6K5 1087 aaKnown RBP6.17□□□□□ -1.42
ATXN3-240ENST00000556339 HECW2Q9P2P5 1572 aa6.17□□□□□ -1.42
ATXN3-240ENST00000556339 EFCAB5A4FU69 1503 aa6.16□□□□□ -1.42
ATXN3-240ENST00000556339 BTBD11A6QL63 1104 aa6.16□□□□□ -1.42
ATXN3-240ENST00000556339 ACPPP15309 386 aa6.16□□□□□ -1.42
ATXN3-240ENST00000556339 HSPA2P54652 639 aa6.16□□□□□ -1.42
ATXN3-240ENST00000556339 C19orf57Q0VDD7 668 aa6.16□□□□□ -1.42
ATXN3-240ENST00000556339 NOM1Q5C9Z4 860 aaKnown RBP6.16□□□□□ -1.42
ATXN3-240ENST00000556339 AFAP1Q8N556 730 aa6.16□□□□□ -1.42
ATXN3-240ENST00000556339 SHKBP1Q8TBC3 707 aa6.16□□□□□ -1.42
ATXN3-240ENST00000556339 FAM83CQ9BQN1 747 aa6.16□□□□□ -1.42
ATXN3-240ENST00000556339 USP26Q9BXU7 913 aa6.16□□□□□ -1.42
ATXN3-240ENST00000556339 ZMYND15Q9H091 742 aa6.16□□□□□ -1.42
ATXN3-240ENST00000556339 HIF3AQ9Y2N7 669 aa6.16□□□□□ -1.42
ATXN3-240ENST00000556339 CLIP1P30622 1438 aa6.16□□□□□ -1.42
ATXN3-240ENST00000556339 PTPRMP28827 1452 aa6.15□□□□□ -1.42
ATXN3-240ENST00000556339 CDK13Q14004 1512 aaKnown RBP6.15□□□□□ -1.42
ATXN3-240ENST00000556339 WDR64B1ANS9 1081 aa6.15□□□□□ -1.42
ATXN3-240ENST00000556339 TRPA1O75762 1119 aa6.15□□□□□ -1.42
ATXN3-240ENST00000556339 TAL1P17542 331 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-240ENST00000556339 NUTM2GQ5VZR2 741 aa6.15□□□□□ -1.42
ATXN3-240ENST00000556339 HELQQ8TDG4 1101 aa6.15□□□□□ -1.42
ATXN3-240ENST00000556339 DZANK1Q9NVP4 752 aa6.15□□□□□ -1.42
ATXN3-240ENST00000556339 SALL4Q9UJQ4 1053 aa6.15□□□□□ -1.42
ATXN3-240ENST00000556339 PLCH2O75038 1416 aa6.15□□□□□ -1.43
ATXN3-240ENST00000556339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.15□□□□□ -1.43
ATXN3-240ENST00000556339 A6NHS1 94 aa6.14□□□□□ -1.43
ATXN3-240ENST00000556339 WNT11O96014 354 aa6.14□□□□□ -1.43
ATXN3-240ENST00000556339 CEBPAP49715 358 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-240ENST00000556339 SRPK2P78362 688 aaKnown RBP6.14□□□□□ -1.43
ATXN3-240ENST00000556339 IKBKEQ14164 716 aa6.14□□□□□ -1.43
ATXN3-240ENST00000556339 FBXL6Q8N531 539 aa6.14□□□□□ -1.43
ATXN3-240ENST00000556339 C12orf50Q8NA57 414 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-240ENST00000556339 ASAP3Q8TDY4 903 aa6.14□□□□□ -1.43
ATXN3-240ENST00000556339 FBXO41Q8TF61 875 aa6.14□□□□□ -1.43
ATXN3-240ENST00000556339 MFSD14AQ96MC6 490 aa6.14□□□□□ -1.43
ATXN3-240ENST00000556339 OSMRQ99650 979 aa6.14□□□□□ -1.43
ATXN3-240ENST00000556339 ATG3Q9NT62 314 aa6.14□□□□□ -1.43
ATXN3-240ENST00000556339 TM4SF5O14894 197 aa6.13□□□□□ -1.43
ATXN3-240ENST00000556339 PHACTR2O75167 634 aa6.13□□□□□ -1.43
ATXN3-240ENST00000556339 PDGFAP04085 211 aa6.13□□□□□ -1.43
ATXN3-240ENST00000556339 EDN3P14138 238 aa6.13□□□□□ -1.43
ATXN3-240ENST00000556339 MAP4P27816 1152 aaKnown RBP6.13□□□□□ -1.43
ATXN3-240ENST00000556339 MZF1P28698 734 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-240ENST00000556339 ALKBH2Q6NS38 261 aa6.13□□□□□ -1.43
ATXN3-240ENST00000556339 BSNDQ8WZ55 320 aa6.13□□□□□ -1.43
ATXN3-240ENST00000556339 HHIPQ96QV1 700 aa6.13□□□□□ -1.43
ATXN3-240ENST00000556339 CYP4F12Q9HCS2 524 aa6.13□□□□□ -1.43
ATXN3-240ENST00000556339 SERPINA10Q9UK55 444 aa6.13□□□□□ -1.43
ATXN3-240ENST00000556339 ANGEL1Q9UNK9 670 aaKnown RBP6.13□□□□□ -1.43
ATXN3-240ENST00000556339 RNF114Q9Y508 228 aa6.13□□□□□ -1.43
ATXN3-240ENST00000556339 CFAP74Q9C0B2 1584 aa6.13□□□□□ -1.43
ATXN3-240ENST00000556339 SETD1BQ9UPS6 1966 aaKnown RBP6.13□□□□□ -1.43
ATXN3-240ENST00000556339 ATP10AO60312 1499 aa6.12□□□□□ -1.43
ATXN3-240ENST00000556339 SPINK2P20155 84 aa6.12□□□□□ -1.43
ATXN3-240ENST00000556339 MPSTP25325 297 aa6.12□□□□□ -1.43
ATXN3-240ENST00000556339 EIF1AXP47813 144 aaKnown RBP6.12□□□□□ -1.43
ATXN3-240ENST00000556339 HNRNPMP52272 730 aaKnown RBP eCLIP6.12□□□□□ -1.43
ATXN3-240ENST00000556339 ADAMTSL3P82987 1691 aa6.12□□□□□ -1.43
ATXN3-240ENST00000556339 ARHGAP5Q13017 1502 aa6.12□□□□□ -1.43
ATXN3-240ENST00000556339 BCORL1Q5H9F3 1711 aa6.12□□□□□ -1.43
ATXN3-240ENST00000556339 XKR5Q6UX68 686 aa6.12□□□□□ -1.43
ATXN3-240ENST00000556339 ZFYVE16Q7Z3T8 1539 aa6.12□□□□□ -1.43
ATXN3-240ENST00000556339 DTX1Q86Y01 620 aa6.12□□□□□ -1.43
ATXN3-240ENST00000556339 TMEM102Q8N9M5 508 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-240ENST00000556339 OSBPL1AQ9BXW6 950 aa6.12□□□□□ -1.43
ATXN3-240ENST00000556339 GGNBP2Q9H3C7 697 aa6.12□□□□□ -1.43
ATXN3-240ENST00000556339 ARHGAP35Q9NRY4 1499 aa6.12□□□□□ -1.43
ATXN3-240ENST00000556339 YEATS2Q9ULM3 1422 aa6.12□□□□□ -1.43
ATXN3-240ENST00000556339 SOX13Q9UN79 622 aa6.12□□□□□ -1.43
ATXN3-240ENST00000556339 LEMD3Q9Y2U8 911 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms