RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 WDR44Q5JSH3 913 aa8.06□□□□□ -1.12
HIF1A-208ENST00000556237 CCDC30Q5VVM6 783 aa8.06□□□□□ -1.12
HIF1A-208ENST00000556237 NBPF10Q6P3W6 841 aaKnown RBP8.06□□□□□ -1.12
HIF1A-208ENST00000556237 ATF7IPQ6VMQ6 1270 aa8.06□□□□□ -1.12
HIF1A-208ENST00000556237 CYP2U1Q7Z449 544 aa8.06□□□□□ -1.12
HIF1A-208ENST00000556237 NBPF15Q8N660 670 aa8.06□□□□□ -1.12
HIF1A-208ENST00000556237 CCDC136Q96JN2 1154 aa8.06□□□□□ -1.12
HIF1A-208ENST00000556237 CDCA7Q9BWT1 371 aaPredicted RBP8.06□□□□□ -1.12
HIF1A-208ENST00000556237 GRIP2Q9C0E4 1043 aa8.06□□□□□ -1.12
HIF1A-208ENST00000556237 USP21Q9UK80 565 aa8.06□□□□□ -1.12
HIF1A-208ENST00000556237 PLEKHG2Q9H7P9 1386 aa8.06□□□□□ -1.12
HIF1A-208ENST00000556237 SPATA31A5Q5VU36 1347 aa8.05□□□□□ -1.12
HIF1A-208ENST00000556237 SPATA31A7Q8IWB4 1347 aa8.05□□□□□ -1.12
HIF1A-208ENST00000556237 FAM208AQ9UK61 1670 aaKnown RBP8.05□□□□□ -1.12
HIF1A-208ENST00000556237 SPATA31C2B4DYI2 1134 aa8.05□□□□□ -1.12
HIF1A-208ENST00000556237 ITGB2P05107 769 aa8.05□□□□□ -1.12
HIF1A-208ENST00000556237 VPS72Q15906 364 aa8.05□□□□□ -1.12
HIF1A-208ENST00000556237 FTSJ3Q8IY81 847 aaKnown RBP8.05□□□□□ -1.12
HIF1A-208ENST00000556237 ARHGAP45Q92619 1136 aa8.05□□□□□ -1.12
HIF1A-208ENST00000556237 STK31Q9BXU1 1019 aa8.05□□□□□ -1.12
HIF1A-208ENST00000556237 CHMP4AQ9BY43 222 aa8.05□□□□□ -1.12
HIF1A-208ENST00000556237 SOS1Q07889 1333 aaPredicted RBP8.04□□□□□ -1.12
HIF1A-208ENST00000556237 KIF16BQ96L93 1317 aa8.04□□□□□ -1.12
HIF1A-208ENST00000556237 RLBP1P12271 317 aa8.04□□□□□ -1.12
HIF1A-208ENST00000556237 TRIM27P14373 513 aa8.04□□□□□ -1.12
HIF1A-208ENST00000556237 DDB1Q16531 1140 aa8.04□□□□□ -1.12
HIF1A-208ENST00000556237 ZNF790Q6PG37 636 aa8.04□□□□□ -1.12
HIF1A-208ENST00000556237 TTC5Q8N0Z6 440 aa8.04□□□□□ -1.12
HIF1A-208ENST00000556237 API5Q9BZZ5 524 aaKnown RBP8.04□□□□□ -1.12
HIF1A-208ENST00000556237 NUCKS1Q9H1E3 243 aaKnown RBP8.04□□□□□ -1.12
HIF1A-208ENST00000556237 TIMMDC1Q9NPL8 285 aa8.04□□□□□ -1.12
HIF1A-208ENST00000556237 OIP5O43482 229 aa8.03□□□□□ -1.12
HIF1A-208ENST00000556237 F11P03951 625 aa8.03□□□□□ -1.12
HIF1A-208ENST00000556237 PROCP04070 461 aa8.03□□□□□ -1.12
HIF1A-208ENST00000556237 MCCD1P59942 119 aaPredicted RBP8.03□□□□□ -1.12
HIF1A-208ENST00000556237 HDGFL1Q5TGJ6 251 aa8.03□□□□□ -1.12
HIF1A-208ENST00000556237 G2E3Q7L622 706 aa8.03□□□□□ -1.12
HIF1A-208ENST00000556237 TAS1R3Q7RTX0 852 aa8.03□□□□□ -1.12
HIF1A-208ENST00000556237 TMEM57Q8N5G2 664 aa8.03□□□□□ -1.12
HIF1A-208ENST00000556237 GALNT6Q8NCL4 622 aa8.03□□□□□ -1.12
HIF1A-208ENST00000556237 ADAMTS19Q8TE59 1207 aa8.03□□□□□ -1.12
HIF1A-208ENST00000556237 ZNF592Q92610 1267 aa8.03□□□□□ -1.12
HIF1A-208ENST00000556237 ALG2Q9H553 416 aa8.03□□□□□ -1.12
HIF1A-208ENST00000556237 CEP126Q9P2H0 1117 aa8.03□□□□□ -1.12
HIF1A-208ENST00000556237 SLIT2O94813 1529 aa8.03□□□□□ -1.12
HIF1A-208ENST00000556237 KDM6AO15550 1401 aaPredicted RBP8.03□□□□□ -1.12
HIF1A-208ENST00000556237 HOXB7P09629 217 aa8.02□□□□□ -1.13
HIF1A-208ENST00000556237 MAP2K3P46734 347 aa8.02□□□□□ -1.13
HIF1A-208ENST00000556237 SCTRP47872 440 aa8.02□□□□□ -1.13
HIF1A-208ENST00000556237 MVPQ14764 893 aaKnown RBP8.02□□□□□ -1.13
HIF1A-208ENST00000556237 ITPRIPQ8IWB1 547 aa8.02□□□□□ -1.13
HIF1A-208ENST00000556237 ZNF496Q96IT1 587 aaPredicted RBP8.02□□□□□ -1.13
HIF1A-208ENST00000556237 FMNL2Q96PY5 1086 aa8.02□□□□□ -1.13
HIF1A-208ENST00000556237 OXCT2Q9BYC2 517 aaPredicted RBP8.02□□□□□ -1.13
HIF1A-208ENST00000556237 ZMYND15Q9H091 742 aa8.02□□□□□ -1.13
HIF1A-208ENST00000556237 ARHGEF10LQ9HCE6 1279 aa8.02□□□□□ -1.13
HIF1A-208ENST00000556237 TMOD3Q9NYL9 352 aa8.02□□□□□ -1.13
HIF1A-208ENST00000556237 ZNF330Q9Y3S2 320 aaPredicted RBP8.02□□□□□ -1.13
HIF1A-208ENST00000556237 PRAMEF22A3QJZ6 481 aa8.01□□□□□ -1.13
HIF1A-208ENST00000556237 TRAK2O60296 914 aa8.01□□□□□ -1.13
HIF1A-208ENST00000556237 SNRPA1P09661 255 aaKnown RBP8.01□□□□□ -1.13
HIF1A-208ENST00000556237 AAMPQ13685 434 aa8.01□□□□□ -1.13
HIF1A-208ENST00000556237 PHTF2Q8N3S3 785 aa8.01□□□□□ -1.13
HIF1A-208ENST00000556237 PIGBQ92521 554 aa8.01□□□□□ -1.13
HIF1A-208ENST00000556237 SYTL4Q96C24 671 aaPredicted RBP8.01□□□□□ -1.13
HIF1A-208ENST00000556237 CHMP4BQ9H444 224 aaKnown RBP8.01□□□□□ -1.13
HIF1A-208ENST00000556237 OSBPL3Q9H4L5 887 aa8.01□□□□□ -1.13
HIF1A-208ENST00000556237 QTRT2Q9H974 415 aaKnown RBP8.01□□□□□ -1.13
HIF1A-208ENST00000556237 DDX19BQ9UMR2 479 aa8.01□□□□□ -1.13
HIF1A-208ENST00000556237 PCDHB11Q9Y5F2 797 aa8.01□□□□□ -1.13
HIF1A-208ENST00000556237 USP16Q9Y5T5 823 aa8.01□□□□□ -1.13
HIF1A-208ENST00000556237 DISP2A7MBM2 1401 aa8.01□□□□□ -1.13
HIF1A-208ENST00000556237 PTPRCP08575 1304 aa8.01□□□□□ -1.13
HIF1A-208ENST00000556237 AFF2P51816 1311 aa8.01□□□□□ -1.13
HIF1A-208ENST00000556237 BCL9LQ86UU0 1499 aa8□□□□□ -1.13
HIF1A-208ENST00000556237 PTCD1O75127 700 aaKnown RBP8□□□□□ -1.13
HIF1A-208ENST00000556237 TSGA10IPQ3SY00 556 aa8□□□□□ -1.13
HIF1A-208ENST00000556237 MARCH10Q8NA82 808 aaPredicted RBP8□□□□□ -1.13
HIF1A-208ENST00000556237 CFHR5Q9BXR6 569 aa8□□□□□ -1.13
HIF1A-208ENST00000556237 PHAXQ9H814 394 aaKnown RBP8□□□□□ -1.13
HIF1A-208ENST00000556237 CHPF2Q9P2E5 772 aa8□□□□□ -1.13
HIF1A-208ENST00000556237 DBF4Q9UBU7 674 aaPredicted RBP8□□□□□ -1.13
HIF1A-208ENST00000556237 TRPC5Q9UL62 973 aaPredicted RBP8□□□□□ -1.13
HIF1A-208ENST00000556237 HEG1Q9ULI3 1381 aa7.99□□□□□ -1.13
HIF1A-208ENST00000556237 F6X3S4 739 aa7.99□□□□□ -1.13
HIF1A-208ENST00000556237 ZBTB7BO15156 539 aaPredicted RBP7.99□□□□□ -1.13
HIF1A-208ENST00000556237 ANXA1P04083 346 aa7.99□□□□□ -1.13
HIF1A-208ENST00000556237 FKBP5Q13451 457 aaPredicted RBP7.99□□□□□ -1.13
HIF1A-208ENST00000556237 XP32Q5T750 250 aa7.99□□□□□ -1.13
HIF1A-208ENST00000556237 SLC4A10Q6U841 1118 aa7.99□□□□□ -1.13
HIF1A-208ENST00000556237 PKD1L3Q7Z443 1732 aa7.99□□□□□ -1.13
HIF1A-208ENST00000556237 ACSBG1Q96GR2 724 aa7.99□□□□□ -1.13
HIF1A-208ENST00000556237 DDX21Q9NR30 783 aaKnown RBP eCLIP7.99□□□□□ -1.13
HIF1A-208ENST00000556237 ATG3Q9NT62 314 aa7.99□□□□□ -1.13
HIF1A-208ENST00000556237 HYPKQ9NX55 129 aa7.99□□□□□ -1.13
HIF1A-208ENST00000556237 PARP4Q9UKK3 1724 aaKnown RBP7.99□□□□□ -1.13
HIF1A-208ENST00000556237 ASAP1Q9ULH1 1129 aa7.99□□□□□ -1.13
HIF1A-208ENST00000556237 PHF24Q9UPV7 400 aa7.99□□□□□ -1.13
HIF1A-208ENST00000556237 LRP6O75581 1613 aa7.99□□□□□ -1.13
HIF1A-208ENST00000556237 PLCH1Q4KWH8 1693 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms