RNA–Protein interactions for RNA: ENST00000555961.1

NEK9-208, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-208ENST00000555961 EXOSC6Q5RKV6 272 aaKnown RBP3.24□□□□□ -1.89
NEK9-208ENST00000555961 ADAMTSL4Q6UY14 1074 aa3.24□□□□□ -1.89
NEK9-208ENST00000555961 DTX1Q86Y01 620 aa3.24□□□□□ -1.89
NEK9-208ENST00000555961 TMPRSS13Q9BYE2 586 aa3.24□□□□□ -1.89
NEK9-208ENST00000555961 BHLHE41Q9C0J9 482 aaPredicted RBP3.24□□□□□ -1.89
NEK9-208ENST00000555961 CHRDQ9H2X0 955 aa3.24□□□□□ -1.89
NEK9-208ENST00000555961 SUGCTQ9HAC7 445 aa3.24□□□□□ -1.89
NEK9-208ENST00000555961 RAD18Q9NS91 495 aa3.24□□□□□ -1.89
NEK9-208ENST00000555961 SLAIN2Q9P270 581 aa3.24□□□□□ -1.89
NEK9-208ENST00000555961 PRR19A6NJB7 356 aa3.23□□□□□ -1.89
NEK9-208ENST00000555961 TM4SF5O14894 197 aa3.23□□□□□ -1.89
NEK9-208ENST00000555961 CYP11A1P05108 521 aa3.23□□□□□ -1.89
NEK9-208ENST00000555961 ESRRAP11474 423 aaPredicted RBP3.23□□□□□ -1.89
NEK9-208ENST00000555961 FOSL1P15407 271 aa3.23□□□□□ -1.89
NEK9-208ENST00000555961 SSFA2P28290 1259 aa3.23□□□□□ -1.89
NEK9-208ENST00000555961 RGS19P49795 217 aa3.23□□□□□ -1.89
NEK9-208ENST00000555961 CYP27A1Q02318 531 aa3.23□□□□□ -1.89
NEK9-208ENST00000555961 MTMR3Q13615 1198 aa3.23□□□□□ -1.89
NEK9-208ENST00000555961 MAP7Q14244 749 aa3.23□□□□□ -1.89
NEK9-208ENST00000555961 DUSP27Q5VZP5 1158 aa3.23□□□□□ -1.89
NEK9-208ENST00000555961 VN1R5Q7Z5H4 357 aa3.23□□□□□ -1.89
NEK9-208ENST00000555961 VSIG10LQ86VR7 867 aa3.23□□□□□ -1.89
NEK9-208ENST00000555961 FBXL18Q96ME1 805 aa3.23□□□□□ -1.89
NEK9-208ENST00000555961 TBC1D32Q96NH3 1257 aa3.23□□□□□ -1.89
NEK9-208ENST00000555961 CORO1BQ9BR76 489 aa3.23□□□□□ -1.89
NEK9-208ENST00000555961 FOXD3Q9UJU5 478 aaPredicted RBP3.23□□□□□ -1.89
NEK9-208ENST00000555961 BRPF3Q9ULD4 1205 aa3.23□□□□□ -1.89
NEK9-208ENST00000555961 GNEQ9Y223 722 aaKnown RBP3.23□□□□□ -1.89
NEK9-208ENST00000555961 TMEM88BA6NKF7 163 aa3.22□□□□□ -1.89
NEK9-208ENST00000555961 CYP26A1O43174 497 aa3.22□□□□□ -1.89
NEK9-208ENST00000555961 NDUFB5O43674 189 aa3.22□□□□□ -1.89
NEK9-208ENST00000555961 PSPNO60542 156 aa3.22□□□□□ -1.89
NEK9-208ENST00000555961 TIAF1O95411 115 aa3.22□□□□□ -1.89
NEK9-208ENST00000555961 F13BP05160 661 aa3.22□□□□□ -1.89
NEK9-208ENST00000555961 NPR3P17342 541 aa3.22□□□□□ -1.89
NEK9-208ENST00000555961 RAB6AP20340 208 aa3.22□□□□□ -1.89
NEK9-208ENST00000555961 SOX4Q06945 474 aaPredicted RBP3.22□□□□□ -1.89
NEK9-208ENST00000555961 PCDH1Q08174 1060 aa3.22□□□□□ -1.89
NEK9-208ENST00000555961 POU4F3Q15319 338 aa3.22□□□□□ -1.89
NEK9-208ENST00000555961 AKAP4Q5JQC9 854 aa3.22□□□□□ -1.89
NEK9-208ENST00000555961 HGSNATQ68CP4 663 aa3.22□□□□□ -1.89
NEK9-208ENST00000555961 LSRQ86X29 649 aaPredicted RBP3.22□□□□□ -1.89
NEK9-208ENST00000555961 TP53INP2Q8IXH6 220 aa3.22□□□□□ -1.89
NEK9-208ENST00000555961 FBLIM1Q8WUP2 373 aa3.22□□□□□ -1.89
NEK9-208ENST00000555961 CLEC4MQ9H2X3 399 aaPredicted RBP3.22□□□□□ -1.89
NEK9-208ENST00000555961 LIN7BQ9HAP6 207 aa3.22□□□□□ -1.89
NEK9-208ENST00000555961 ZFYVE28Q9HCC9 887 aa3.22□□□□□ -1.89
NEK9-208ENST00000555961 AP4E1Q9UPM8 1137 aa3.22□□□□□ -1.89
NEK9-208ENST00000555961 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.22□□□□□ -1.89
NEK9-208ENST00000555961 A0A096LPE4 126 aa3.21□□□□□ -1.9
NEK9-208ENST00000555961 A0A1W2PPZ6 126 aa3.21□□□□□ -1.9
NEK9-208ENST00000555961 FZD6O60353 706 aa3.21□□□□□ -1.9
NEK9-208ENST00000555961 POLR3DP05423 398 aaPredicted RBP3.21□□□□□ -1.9
NEK9-208ENST00000555961 ADH5P11766 374 aa3.21□□□□□ -1.9
NEK9-208ENST00000555961 DRD2P14416 443 aa3.21□□□□□ -1.9
NEK9-208ENST00000555961 ERCC3P19447 782 aa3.21□□□□□ -1.9
NEK9-208ENST00000555961 MAOBP27338 520 aa3.21□□□□□ -1.9
NEK9-208ENST00000555961 PDE3BQ13370 1112 aa3.21□□□□□ -1.9
NEK9-208ENST00000555961 ZNF211Q13398 564 aaPredicted RBP3.21□□□□□ -1.9
NEK9-208ENST00000555961 PDE3AQ14432 1141 aa3.21□□□□□ -1.9
NEK9-208ENST00000555961 DYMQ7RTS9 669 aa3.21□□□□□ -1.9
NEK9-208ENST00000555961 GLYCTKQ8IVS8 523 aa3.21□□□□□ -1.9
NEK9-208ENST00000555961 GJD3Q8N144 294 aa3.21□□□□□ -1.9
NEK9-208ENST00000555961 AGBL5Q8NDL9 886 aa3.21□□□□□ -1.9
NEK9-208ENST00000555961 FLCNQ8NFG4 579 aa3.21□□□□□ -1.9
NEK9-208ENST00000555961 ANO2Q9NQ90 1003 aa3.21□□□□□ -1.9
NEK9-208ENST00000555961 LATS2Q9NRM7 1088 aa3.21□□□□□ -1.9
NEK9-208ENST00000555961 BSDC1Q9NW68 430 aaPredicted RBP3.21□□□□□ -1.9
NEK9-208ENST00000555961 EGFL7Q9UHF1 273 aa3.21□□□□□ -1.9
NEK9-208ENST00000555961 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.2□□□□□ -1.9
NEK9-208ENST00000555961 METTL12A8MUP2 240 aa3.2□□□□□ -1.9
NEK9-208ENST00000555961 H3BRB1 525 aa3.2□□□□□ -1.9
NEK9-208ENST00000555961 HOXA10P31260 410 aaPredicted RBP3.2□□□□□ -1.9
NEK9-208ENST00000555961 PEAR1Q5VY43 1037 aaPredicted RBP3.2□□□□□ -1.9
NEK9-208ENST00000555961 CDPF1Q6NVV7 123 aa3.2□□□□□ -1.9
NEK9-208ENST00000555961 ZAR1Q86SH2 424 aa3.2□□□□□ -1.9
NEK9-208ENST00000555961 CCNJLQ8IV13 435 aa3.2□□□□□ -1.9
NEK9-208ENST00000555961 GALNT12Q8IXK2 581 aa3.2□□□□□ -1.9
NEK9-208ENST00000555961 ABI1Q8IZP0 508 aa3.2□□□□□ -1.9
NEK9-208ENST00000555961 C2CD4AQ8NCU7 369 aaPredicted RBP3.2□□□□□ -1.9
NEK9-208ENST00000555961 TMC1Q8TDI8 760 aa3.2□□□□□ -1.9
NEK9-208ENST00000555961 ASIC4Q96FT7 647 aa3.2□□□□□ -1.9
NEK9-208ENST00000555961 EHD4Q9H223 541 aa3.2□□□□□ -1.9
NEK9-208ENST00000555961 TUT1Q9H6E5 874 aaKnown RBP3.2□□□□□ -1.9
NEK9-208ENST00000555961 LRRC4CQ9HCJ2 640 aa3.2□□□□□ -1.9
NEK9-208ENST00000555961 CCDC87Q9NVE4 849 aa3.2□□□□□ -1.9
NEK9-208ENST00000555961 CCDC39Q9UFE4 941 aa3.2□□□□□ -1.9
NEK9-208ENST00000555961 PRKAG2Q9UGJ0 569 aa3.2□□□□□ -1.9
NEK9-208ENST00000555961 CCDC9Q9Y3X0 531 aaKnown RBP3.2□□□□□ -1.9
NEK9-208ENST00000555961 A0A1W2PP55 124 aa3.19□□□□□ -1.9
NEK9-208ENST00000555961 CPNE3O75131 537 aaKnown RBP3.19□□□□□ -1.9
NEK9-208ENST00000555961 ADAMTS4O75173 837 aa3.19□□□□□ -1.9
NEK9-208ENST00000555961 GADD45BO75293 160 aaPredicted RBP3.19□□□□□ -1.9
NEK9-208ENST00000555961 PRNPP04156 253 aa3.19□□□□□ -1.9
NEK9-208ENST00000555961 NFICP08651 508 aa3.19□□□□□ -1.9
NEK9-208ENST00000555961 ASPAP45381 313 aa3.19□□□□□ -1.9
NEK9-208ENST00000555961 AP3B2Q13367 1082 aa3.19□□□□□ -1.9
NEK9-208ENST00000555961 MSMPQ1L6U9 139 aa3.19□□□□□ -1.9
NEK9-208ENST00000555961 ARHGAP27Q6ZUM4 889 aa3.19□□□□□ -1.9
NEK9-208ENST00000555961 EZH1Q92800 747 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms