RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 FKBP1AP62942 108 aaKnown RBP13.72□□□□□ -0.21
TDP1-212ENST00000555565 CHRNDQ07001 517 aa13.72□□□□□ -0.21
TDP1-212ENST00000555565 MPHOSPH8Q99549 860 aa13.72□□□□□ -0.21
TDP1-212ENST00000555565 ZFYVE28Q9HCC9 887 aa13.72□□□□□ -0.21
TDP1-212ENST00000555565 MTFR1Q15390 333 aa13.71□□□□□ -0.21
TDP1-212ENST00000555565 TAF1CQ15572 869 aaPredicted RBP13.71□□□□□ -0.21
TDP1-212ENST00000555565 VEZTQ9HBM0 779 aa13.71□□□□□ -0.21
TDP1-212ENST00000555565 ECM29Q5VYK3 1845 aa13.71□□□□□ -0.22
TDP1-212ENST00000555565 OTOFQ9HC10 1997 aa13.71□□□□□ -0.22
TDP1-212ENST00000555565 CCL15-CCL14A0A0B4J2E2 113 aa13.7□□□□□ -0.22
TDP1-212ENST00000555565 ANKRD18BA2A2Z9 1011 aa13.7□□□□□ -0.22
TDP1-212ENST00000555565 GRM8O00222 908 aa13.7□□□□□ -0.22
TDP1-212ENST00000555565 MYO1BO43795 1136 aa13.7□□□□□ -0.22
TDP1-212ENST00000555565 TLR2O60603 784 aa13.7□□□□□ -0.22
TDP1-212ENST00000555565 TAF5LO75529 589 aa13.7□□□□□ -0.22
TDP1-212ENST00000555565 CTGFP29279 349 aa13.7□□□□□ -0.22
TDP1-212ENST00000555565 GTF2A2P52657 109 aa13.7□□□□□ -0.22
TDP1-212ENST00000555565 LACTBP83111 547 aaPredicted RBP13.7□□□□□ -0.22
TDP1-212ENST00000555565 VGLL4Q14135 290 aa13.7□□□□□ -0.22
TDP1-212ENST00000555565 ARHGEF6Q15052 776 aa13.7□□□□□ -0.22
TDP1-212ENST00000555565 CCL15Q16663 113 aa13.7□□□□□ -0.22
TDP1-212ENST00000555565 SPDYE2Q495Y8 402 aa13.7□□□□□ -0.22
TDP1-212ENST00000555565 EPHA10Q5JZY3 1008 aa13.7□□□□□ -0.22
TDP1-212ENST00000555565 SLC17A8Q8NDX2 589 aa13.7□□□□□ -0.22
TDP1-212ENST00000555565 ZSWIM8A7E2V4 1837 aa13.69□□□□□ -0.22
TDP1-212ENST00000555565 IFIT5Q13325 482 aaKnown RBP13.69□□□□□ -0.22
TDP1-212ENST00000555565 LMBR1LQ6UX01 489 aa13.69□□□□□ -0.22
TDP1-212ENST00000555565 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.69□□□□□ -0.22
TDP1-212ENST00000555565 ZNF70Q9UC06 446 aaPredicted RBP13.69□□□□□ -0.22
TDP1-212ENST00000555565 JAG2Q9Y219 1238 aa13.69□□□□□ -0.22
TDP1-212ENST00000555565 ALDH1L1O75891 902 aa13.68□□□□□ -0.22
TDP1-212ENST00000555565 MAP3K9P80192 1104 aa13.68□□□□□ -0.22
TDP1-212ENST00000555565 SLC4A10Q6U841 1118 aa13.68□□□□□ -0.22
TDP1-212ENST00000555565 HELBQ8NG08 1087 aaPredicted RBP13.68□□□□□ -0.22
TDP1-212ENST00000555565 DPF3Q92784 378 aa13.68□□□□□ -0.22
TDP1-212ENST00000555565 CHMP3Q9Y3E7 222 aa13.68□□□□□ -0.22
TDP1-212ENST00000555565 A0A1B0GUL6 1792 aa13.68□□□□□ -0.22
TDP1-212ENST00000555565 BTBD19C9JJ37 291 aa13.67□□□□□ -0.22
TDP1-212ENST00000555565 SOX1O00570 391 aaPredicted RBP13.67□□□□□ -0.22
TDP1-212ENST00000555565 GNRH1P01148 92 aa13.67□□□□□ -0.22
TDP1-212ENST00000555565 KCNJ4P48050 445 aa13.67□□□□□ -0.22
TDP1-212ENST00000555565 ZNF594Q96JF6 807 aaPredicted RBP13.67□□□□□ -0.22
TDP1-212ENST00000555565 SRCIN1Q9C0H9 1055 aa13.67□□□□□ -0.22
TDP1-212ENST00000555565 TDRD3Q9H7E2 651 aaKnown RBP13.67□□□□□ -0.22
TDP1-212ENST00000555565 C9orf78Q9NZ63 289 aaPredicted RBP13.67□□□□□ -0.22
TDP1-212ENST00000555565 SPDYE5A6NIY4 337 aa13.66□□□□□ -0.22
TDP1-212ENST00000555565 GJA8P48165 433 aa13.66□□□□□ -0.22
TDP1-212ENST00000555565 PRMT2P55345 433 aa13.66□□□□□ -0.22
TDP1-212ENST00000555565 CCDC57Q2TAC2 916 aa13.66□□□□□ -0.22
TDP1-212ENST00000555565 C17orf99Q6UX52 265 aa13.66□□□□□ -0.22
TDP1-212ENST00000555565 MRPL50Q8N5N7 158 aaKnown RBP13.66□□□□□ -0.22
TDP1-212ENST00000555565 KAZALD1Q96I82 304 aa13.66□□□□□ -0.22
TDP1-212ENST00000555565 TMEM39BQ9GZU3 492 aa13.66□□□□□ -0.22
TDP1-212ENST00000555565 ZCCHC17Q9NP64 241 aaKnown RBP13.66□□□□□ -0.22
TDP1-212ENST00000555565 SNCAIPQ9Y6H5 919 aa13.66□□□□□ -0.22
TDP1-212ENST00000555565 FAM205AQ6ZU69 1335 aa13.65□□□□□ -0.22
TDP1-212ENST00000555565 E9PSI1 815 aa13.65□□□□□ -0.22
TDP1-212ENST00000555565 RBM5P52756 815 aaKnown RBP eCLIP13.65□□□□□ -0.22
TDP1-212ENST00000555565 TNFAIP1Q13829 316 aa13.65□□□□□ -0.22
TDP1-212ENST00000555565 LDHAL6AQ6ZMR3 332 aa13.65□□□□□ -0.22
TDP1-212ENST00000555565 SUCLG2Q96I99 432 aa13.65□□□□□ -0.22
TDP1-212ENST00000555565 TRIM47Q96LD4 638 aa13.65□□□□□ -0.22
TDP1-212ENST00000555565 SRRDQ9UH36 339 aa13.65□□□□□ -0.22
TDP1-212ENST00000555565 SERPINA10Q9UK55 444 aa13.65□□□□□ -0.22
TDP1-212ENST00000555565 UTYO14607 1347 aa13.64□□□□□ -0.23
TDP1-212ENST00000555565 TCP10L2B9ZVM9 353 aa13.64□□□□□ -0.23
TDP1-212ENST00000555565 IRF6O14896 467 aa13.64□□□□□ -0.23
TDP1-212ENST00000555565 ZBTB7BO15156 539 aaPredicted RBP13.64□□□□□ -0.23
TDP1-212ENST00000555565 GJB1P08034 283 aa13.64□□□□□ -0.23
TDP1-212ENST00000555565 NBPF7P0C2Y1 421 aaPredicted RBP13.64□□□□□ -0.23
TDP1-212ENST00000555565 CETPP11597 493 aa13.64□□□□□ -0.23
TDP1-212ENST00000555565 SLFN5Q08AF3 891 aa13.64□□□□□ -0.23
TDP1-212ENST00000555565 ZNF804AQ7Z570 1209 aa13.64□□□□□ -0.23
TDP1-212ENST00000555565 DZIP1LQ8IYY4 767 aaKnown RBP13.64□□□□□ -0.23
TDP1-212ENST00000555565 TDRD7Q8NHU6 1098 aaKnown RBP13.64□□□□□ -0.23
TDP1-212ENST00000555565 CUL9Q8IWT3 2517 aa13.63□□□□□ -0.23
TDP1-212ENST00000555565 KIF22Q14807 665 aa13.63□□□□□ -0.23
TDP1-212ENST00000555565 GRIK5Q16478 980 aa13.63□□□□□ -0.23
TDP1-212ENST00000555565 TAF7LQ5H9L4 462 aa13.63□□□□□ -0.23
TDP1-212ENST00000555565 ERO1BQ86YB8 467 aa13.63□□□□□ -0.23
TDP1-212ENST00000555565 SSH1Q8WYL5 1049 aa13.63□□□□□ -0.23
TDP1-212ENST00000555565 CDCA7LQ96GN5 454 aa13.63□□□□□ -0.23
TDP1-212ENST00000555565 LRCH3Q96II8 777 aa13.63□□□□□ -0.23
TDP1-212ENST00000555565 CNNM1Q9NRU3 951 aa13.63□□□□□ -0.23
TDP1-212ENST00000555565 TTF2Q9UNY4 1162 aaKnown RBP13.63□□□□□ -0.23
TDP1-212ENST00000555565 CSADQ9Y600 493 aa13.63□□□□□ -0.23
TDP1-212ENST00000555565 ADGRA2Q96PE1 1338 aa13.63□□□□□ -0.23
TDP1-212ENST00000555565 A0A1W2PPC1 479 aa13.62□□□□□ -0.23
TDP1-212ENST00000555565 PLIN1O60240 522 aa13.62□□□□□ -0.23
TDP1-212ENST00000555565 CCL5P13501 91 aa13.62□□□□□ -0.23
TDP1-212ENST00000555565 OSBPP22059 807 aa13.62□□□□□ -0.23
TDP1-212ENST00000555565 GRK4P32298 578 aa13.62□□□□□ -0.23
TDP1-212ENST00000555565 PSMC4P43686 418 aa13.62□□□□□ -0.23
TDP1-212ENST00000555565 MFSD14BQ5SR56 506 aa13.62□□□□□ -0.23
TDP1-212ENST00000555565 NKX2-3Q8TAU0 364 aa13.62□□□□□ -0.23
TDP1-212ENST00000555565 ZKSCAN4Q969J2 545 aaPredicted RBP13.62□□□□□ -0.23
TDP1-212ENST00000555565 PUS3Q9BZE2 481 aaKnown RBP13.62□□□□□ -0.23
TDP1-212ENST00000555565 BICC1Q9H694 974 aaKnown RBP13.62□□□□□ -0.23
TDP1-212ENST00000555565 CPA4Q9UI42 421 aa13.62□□□□□ -0.23
TDP1-212ENST00000555565 RIPOR2Q9Y4F9 1068 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms