RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 OGFOD3Q6PK18 319 aa7.57□□□□□ -1.2
SRP54-207ENST00000555535 ZNF574Q6ZN55 896 aaPredicted RBP7.57□□□□□ -1.2
SRP54-207ENST00000555535 SPRED2Q7Z698 418 aa7.57□□□□□ -1.2
SRP54-207ENST00000555535 FNBP4Q8N3X1 1017 aaPredicted RBP7.57□□□□□ -1.2
SRP54-207ENST00000555535 TTC16Q8NEE8 873 aa7.57□□□□□ -1.2
SRP54-207ENST00000555535 NUDT16Q96DE0 195 aaKnown RBP7.57□□□□□ -1.2
SRP54-207ENST00000555535 SEMA6CQ9H3T2 930 aa7.57□□□□□ -1.2
SRP54-207ENST00000555535 LILRA6Q6PI73 481 aa7.56□□□□□ -1.2
SRP54-207ENST00000555535 OSMRQ99650 979 aa7.56□□□□□ -1.2
SRP54-207ENST00000555535 ACTL7BQ9Y614 415 aa7.56□□□□□ -1.2
SRP54-207ENST00000555535 NCANO14594 1321 aa7.55□□□□□ -1.2
SRP54-207ENST00000555535 PRRG2O14669 202 aa7.55□□□□□ -1.2
SRP54-207ENST00000555535 ESRRAP11474 423 aaPredicted RBP7.55□□□□□ -1.2
SRP54-207ENST00000555535 ACPPP15309 386 aa7.55□□□□□ -1.2
SRP54-207ENST00000555535 RAB6AP20340 208 aa7.55□□□□□ -1.2
SRP54-207ENST00000555535 WFDC3Q8IUB2 231 aa7.55□□□□□ -1.2
SRP54-207ENST00000555535 SIAH1Q8IUQ4 282 aa7.55□□□□□ -1.2
SRP54-207ENST00000555535 C1orf127Q8N9H9 656 aa7.55□□□□□ -1.2
SRP54-207ENST00000555535 PI4K2BQ8TCG2 481 aa7.55□□□□□ -1.2
SRP54-207ENST00000555535 HHIPQ96QV1 700 aa7.55□□□□□ -1.2
SRP54-207ENST00000555535 PPP1R16BQ96T49 567 aa7.55□□□□□ -1.2
SRP54-207ENST00000555535 ACSS3Q9H6R3 686 aa7.55□□□□□ -1.2
SRP54-207ENST00000555535 VAV3Q9UKW4 847 aa7.55□□□□□ -1.2
SRP54-207ENST00000555535 ZNF865P0CJ78 1059 aaPredicted RBP7.54□□□□□ -1.2
SRP54-207ENST00000555535 EDN3P14138 238 aa7.54□□□□□ -1.2
SRP54-207ENST00000555535 RAP1GAPP47736 663 aa7.54□□□□□ -1.2
SRP54-207ENST00000555535 GSTM4Q03013 218 aa7.54□□□□□ -1.2
SRP54-207ENST00000555535 MESP2Q0VG99 397 aa7.54□□□□□ -1.2
SRP54-207ENST00000555535 NETO1Q8TDF5 533 aa7.54□□□□□ -1.2
SRP54-207ENST00000555535 RAPGEFL1Q9UHV5 662 aa7.54□□□□□ -1.2
SRP54-207ENST00000555535 ZBTB39O15060 712 aa7.53□□□□□ -1.2
SRP54-207ENST00000555535 CYP11A1P05108 521 aa7.53□□□□□ -1.2
SRP54-207ENST00000555535 RNASE1P07998 156 aaKnown RBP7.53□□□□□ -1.2
SRP54-207ENST00000555535 BHLHE41Q9C0J9 482 aaPredicted RBP7.53□□□□□ -1.2
SRP54-207ENST00000555535 MBNL3Q9NUK0 354 aaKnown RBP7.53□□□□□ -1.2
SRP54-207ENST00000555535 CXXC1Q9P0U4 656 aaPredicted RBP7.53□□□□□ -1.2
SRP54-207ENST00000555535 LRRC10BA6NIK2 292 aa7.52□□□□□ -1.21
SRP54-207ENST00000555535 TRPA1O75762 1119 aa7.52□□□□□ -1.21
SRP54-207ENST00000555535 PRKCQQ04759 706 aa7.52□□□□□ -1.21
SRP54-207ENST00000555535 NAA30Q147X3 362 aaPredicted RBP7.52□□□□□ -1.21
SRP54-207ENST00000555535 DYMQ7RTS9 669 aa7.52□□□□□ -1.21
SRP54-207ENST00000555535 ZKSCAN3Q9BRR0 538 aa7.52□□□□□ -1.21
SRP54-207ENST00000555535 TSPAN15O95858 294 aa7.51□□□□□ -1.21
SRP54-207ENST00000555535 ELOAQ14241 798 aaKnown RBP7.51□□□□□ -1.21
SRP54-207ENST00000555535 SEZ6L2Q6UXD5 910 aa7.51□□□□□ -1.21
SRP54-207ENST00000555535 ASAP3Q8TDY4 903 aa7.51□□□□□ -1.21
SRP54-207ENST00000555535 MKNK1Q9BUB5 465 aa7.51□□□□□ -1.21
SRP54-207ENST00000555535 C1GALT1Q9NS00 363 aa7.51□□□□□ -1.21
SRP54-207ENST00000555535 B8ZZF3 427 aa7.5□□□□□ -1.21
SRP54-207ENST00000555535 CD8BP10966 210 aa7.5□□□□□ -1.21
SRP54-207ENST00000555535 ASPAP45381 313 aa7.5□□□□□ -1.21
SRP54-207ENST00000555535 BNIP3Q12983 259 aa7.5□□□□□ -1.21
SRP54-207ENST00000555535 CILP2Q8IUL8 1156 aa7.5□□□□□ -1.21
SRP54-207ENST00000555535 LRRN4CLQ8ND94 238 aa7.5□□□□□ -1.21
SRP54-207ENST00000555535 DDX54Q8TDD1 881 aaKnown RBP7.5□□□□□ -1.21
SRP54-207ENST00000555535 NRSN2Q9GZP1 204 aa7.5□□□□□ -1.21
SRP54-207ENST00000555535 GSX1Q9H4S2 264 aaPredicted RBP7.5□□□□□ -1.21
SRP54-207ENST00000555535 RAD18Q9NS91 495 aa7.5□□□□□ -1.21
SRP54-207ENST00000555535 FAM105AQ9NUU6 356 aa7.5□□□□□ -1.21
SRP54-207ENST00000555535 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.5□□□□□ -1.21
SRP54-207ENST00000555535 CFPP27918 469 aa7.49□□□□□ -1.21
SRP54-207ENST00000555535 FLAD1Q8NFF5 587 aa7.49□□□□□ -1.21
SRP54-207ENST00000555535 MKNK2Q9HBH9 465 aa7.49□□□□□ -1.21
SRP54-207ENST00000555535 TPRNQ4KMQ1 711 aa7.48□□□□□ -1.21
SRP54-207ENST00000555535 AKAP4Q5JQC9 854 aa7.48□□□□□ -1.21
SRP54-207ENST00000555535 CFAP70Q5T0N1 1121 aa7.48□□□□□ -1.21
SRP54-207ENST00000555535 ZSWIM9Q86XI8 627 aa7.48□□□□□ -1.21
SRP54-207ENST00000555535 ANKLE2Q86XL3 938 aa7.48□□□□□ -1.21
SRP54-207ENST00000555535 CHRDQ9H2X0 955 aa7.48□□□□□ -1.21
SRP54-207ENST00000555535 ADAMTS6Q9UKP5 1117 aa7.48□□□□□ -1.21
SRP54-207ENST00000555535 DAGLAQ9Y4D2 1042 aa7.48□□□□□ -1.21
SRP54-207ENST00000555535 SYNGAP1Q96PV0 1343 aa7.48□□□□□ -1.21
SRP54-207ENST00000555535 MAOBP27338 520 aa7.47□□□□□ -1.21
SRP54-207ENST00000555535 FAM69CQ0P6D2 419 aa7.47□□□□□ -1.21
SRP54-207ENST00000555535 POU4F3Q15319 338 aa7.47□□□□□ -1.21
SRP54-207ENST00000555535 ANGEL2Q5VTE6 544 aaKnown RBP7.47□□□□□ -1.21
SRP54-207ENST00000555535 SLC23A3Q6PIS1 610 aa7.47□□□□□ -1.21
SRP54-207ENST00000555535 LRRC56Q8IYG6 542 aaPredicted RBP7.47□□□□□ -1.21
SRP54-207ENST00000555535 HRASLS5Q96KN8 279 aa7.47□□□□□ -1.21
SRP54-207ENST00000555535 AP4E1Q9UPM8 1137 aa7.47□□□□□ -1.21
SRP54-207ENST00000555535 IFI16Q16666 785 aaKnown RBP7.46□□□□□ -1.22
SRP54-207ENST00000555535 C8orf34Q49A92 452 aa7.46□□□□□ -1.22
SRP54-207ENST00000555535 CAPN12Q6ZSI9 719 aa7.46□□□□□ -1.22
SRP54-207ENST00000555535 PLD6Q8N2A8 252 aaKnown RBP7.46□□□□□ -1.22
SRP54-207ENST00000555535 EDEM1Q92611 657 aa7.46□□□□□ -1.22
SRP54-207ENST00000555535 CLUAP1Q96AJ1 413 aa7.46□□□□□ -1.22
SRP54-207ENST00000555535 TMEM265A0A087WTH1 108 aa7.45□□□□□ -1.22
SRP54-207ENST00000555535 PHACTR2O75167 634 aa7.45□□□□□ -1.22
SRP54-207ENST00000555535 MZF1P28698 734 aaPredicted RBP7.45□□□□□ -1.22
SRP54-207ENST00000555535 KCNMB1Q16558 191 aa7.45□□□□□ -1.22
SRP54-207ENST00000555535 C1QL4Q86Z23 238 aa7.45□□□□□ -1.22
SRP54-207ENST00000555535 CORO1BQ9BR76 489 aa7.45□□□□□ -1.22
SRP54-207ENST00000555535 PDGFAP04085 211 aa7.44□□□□□ -1.22
SRP54-207ENST00000555535 ZSCAN22P10073 491 aaPredicted RBP7.44□□□□□ -1.22
SRP54-207ENST00000555535 DNM1Q05193 864 aaKnown RBP7.44□□□□□ -1.22
SRP54-207ENST00000555535 MLANAQ16655 118 aa7.44□□□□□ -1.22
SRP54-207ENST00000555535 LCNL1Q6ZST4 164 aa7.44□□□□□ -1.22
SRP54-207ENST00000555535 SNX29Q8TEQ0 813 aa7.44□□□□□ -1.22
SRP54-207ENST00000555535 CLEC4MQ9H2X3 399 aaPredicted RBP7.44□□□□□ -1.22
SRP54-207ENST00000555535 DYNC1LI2O43237 492 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 215.1 ms