RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 SRPK2P78362 688 aaKnown RBP9.67□□□□□ -0.86
VRK1-205ENST00000555402 TTC16Q8NEE8 873 aa9.67□□□□□ -0.86
VRK1-205ENST00000555402 PDGFAP04085 211 aa9.66□□□□□ -0.86
VRK1-205ENST00000555402 ESRRAP11474 423 aaPredicted RBP9.66□□□□□ -0.86
VRK1-205ENST00000555402 GSTM4Q03013 218 aa9.66□□□□□ -0.86
VRK1-205ENST00000555402 RETREG2Q8NC44 543 aa9.66□□□□□ -0.86
VRK1-205ENST00000555402 ASAP3Q8TDY4 903 aa9.66□□□□□ -0.86
VRK1-205ENST00000555402 ATG7O95352 703 aa9.65□□□□□ -0.86
VRK1-205ENST00000555402 PAPLNO95428 1278 aa9.65□□□□□ -0.86
VRK1-205ENST00000555402 PBXIP1Q96AQ6 731 aa9.65□□□□□ -0.86
VRK1-205ENST00000555402 LRRC4CQ9HCJ2 640 aa9.65□□□□□ -0.86
VRK1-205ENST00000555402 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.64□□□□□ -0.87
VRK1-205ENST00000555402 ZBTB7CA1YPR0 619 aa9.64□□□□□ -0.87
VRK1-205ENST00000555402 EREGO14944 169 aa9.64□□□□□ -0.87
VRK1-205ENST00000555402 CYP27A1Q02318 531 aa9.64□□□□□ -0.87
VRK1-205ENST00000555402 BHLHE41Q9C0J9 482 aaPredicted RBP9.64□□□□□ -0.87
VRK1-205ENST00000555402 NFICP08651 508 aa9.63□□□□□ -0.87
VRK1-205ENST00000555402 MZF1P28698 734 aaPredicted RBP9.63□□□□□ -0.87
VRK1-205ENST00000555402 NOM1Q5C9Z4 860 aaKnown RBP9.63□□□□□ -0.87
VRK1-205ENST00000555402 ZNF648Q5T619 568 aaPredicted RBP9.63□□□□□ -0.87
VRK1-205ENST00000555402 LCE4AQ5TA78 99 aa9.63□□□□□ -0.87
VRK1-205ENST00000555402 TRAIPQ9BWF2 469 aa9.63□□□□□ -0.87
VRK1-205ENST00000555402 SLAIN2Q9P270 581 aa9.63□□□□□ -0.87
VRK1-205ENST00000555402 ACTL7BQ9Y614 415 aa9.63□□□□□ -0.87
VRK1-205ENST00000555402 EIF4EBP3O60516 100 aaPredicted RBP9.62□□□□□ -0.87
VRK1-205ENST00000555402 ADH5P11766 374 aa9.62□□□□□ -0.87
VRK1-205ENST00000555402 EDN3P14138 238 aa9.62□□□□□ -0.87
VRK1-205ENST00000555402 MAP7Q14244 749 aa9.62□□□□□ -0.87
VRK1-205ENST00000555402 ZNF765Q7L2R6 523 aa9.62□□□□□ -0.87
VRK1-205ENST00000555402 KRTAP4-2Q9BYR5 136 aa9.62□□□□□ -0.87
VRK1-205ENST00000555402 NRSN2Q9GZP1 204 aa9.62□□□□□ -0.87
VRK1-205ENST00000555402 PDE4CQ08493 712 aa9.61□□□□□ -0.87
VRK1-205ENST00000555402 BCL7CQ8WUZ0 217 aaPredicted RBP9.61□□□□□ -0.87
VRK1-205ENST00000555402 SLC5A6Q9Y289 635 aa9.61□□□□□ -0.87
VRK1-205ENST00000555402 HELQQ8TDG4 1101 aa9.6□□□□□ -0.87
VRK1-205ENST00000555402 SEMA6CQ9H3T2 930 aa9.6□□□□□ -0.87
VRK1-205ENST00000555402 CARMIL2Q6F5E8 1435 aa9.59□□□□□ -0.87
VRK1-205ENST00000555402 BIN1O00499 593 aa9.59□□□□□ -0.87
VRK1-205ENST00000555402 PHACTR2O75167 634 aa9.59□□□□□ -0.87
VRK1-205ENST00000555402 TNFRSF21O75509 655 aa9.59□□□□□ -0.87
VRK1-205ENST00000555402 RAB6AP20340 208 aa9.59□□□□□ -0.87
VRK1-205ENST00000555402 ATP2B4P23634 1241 aa9.59□□□□□ -0.87
VRK1-205ENST00000555402 ZNF124Q15973 351 aa9.59□□□□□ -0.87
VRK1-205ENST00000555402 AEBP1Q8IUX7 1158 aa9.59□□□□□ -0.87
VRK1-205ENST00000555402 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.59□□□□□ -0.87
VRK1-205ENST00000555402 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.58□□□□□ -0.88
VRK1-205ENST00000555402 DBX1A6NMT0 343 aa9.58□□□□□ -0.88
VRK1-205ENST00000555402 EIF1AXP47813 144 aaKnown RBP9.58□□□□□ -0.88
VRK1-205ENST00000555402 PLCL1Q15111 1095 aa9.58□□□□□ -0.88
VRK1-205ENST00000555402 ZNF792Q3KQV3 632 aa9.58□□□□□ -0.88
VRK1-205ENST00000555402 PEAR1Q5VY43 1037 aaPredicted RBP9.58□□□□□ -0.88
VRK1-205ENST00000555402 ACSS3Q9H6R3 686 aa9.58□□□□□ -0.88
VRK1-205ENST00000555402 FBLN7Q53RD9 439 aa9.57□□□□□ -0.88
VRK1-205ENST00000555402 ZNF574Q6ZN55 896 aaPredicted RBP9.57□□□□□ -0.88
VRK1-205ENST00000555402 DYMQ7RTS9 669 aa9.57□□□□□ -0.88
VRK1-205ENST00000555402 SPRED2Q7Z698 418 aa9.57□□□□□ -0.88
VRK1-205ENST00000555402 WFDC3Q8IUB2 231 aa9.57□□□□□ -0.88
VRK1-205ENST00000555402 LATS2Q9NRM7 1088 aa9.57□□□□□ -0.88
VRK1-205ENST00000555402 FAM105AQ9NUU6 356 aa9.57□□□□□ -0.88
VRK1-205ENST00000555402 POLIQ9UNA4 740 aa9.57□□□□□ -0.88
VRK1-205ENST00000555402 METTL12A8MUP2 240 aa9.56□□□□□ -0.88
VRK1-205ENST00000555402 CTSBP07858 339 aa9.56□□□□□ -0.88
VRK1-205ENST00000555402 MAOBP27338 520 aa9.56□□□□□ -0.88
VRK1-205ENST00000555402 SEZ6L2Q6UXD5 910 aa9.56□□□□□ -0.88
VRK1-205ENST00000555402 C1GALT1Q9NS00 363 aa9.56□□□□□ -0.88
VRK1-205ENST00000555402 FOXD3Q9UJU5 478 aaPredicted RBP9.56□□□□□ -0.88
VRK1-205ENST00000555402 MPSTP25325 297 aa9.55□□□□□ -0.88
VRK1-205ENST00000555402 AKAP4Q5JQC9 854 aa9.55□□□□□ -0.88
VRK1-205ENST00000555402 OGFOD3Q6PK18 319 aa9.55□□□□□ -0.88
VRK1-205ENST00000555402 STK11IPQ8N1F8 1099 aa9.55□□□□□ -0.88
VRK1-205ENST00000555402 SNX29Q8TEQ0 813 aa9.55□□□□□ -0.88
VRK1-205ENST00000555402 CYP11A1P05108 521 aa9.54□□□□□ -0.88
VRK1-205ENST00000555402 ASPAP45381 313 aa9.54□□□□□ -0.88
VRK1-205ENST00000555402 POU4F3Q15319 338 aa9.54□□□□□ -0.88
VRK1-205ENST00000555402 ZNF423Q2M1K9 1284 aa9.54□□□□□ -0.88
VRK1-205ENST00000555402 GSX1Q9H4S2 264 aaPredicted RBP9.54□□□□□ -0.88
VRK1-205ENST00000555402 RAD18Q9NS91 495 aa9.54□□□□□ -0.88
VRK1-205ENST00000555402 FARP2O94887 1054 aaPredicted RBP9.53□□□□□ -0.88
VRK1-205ENST00000555402 PCDH1Q08174 1060 aa9.53□□□□□ -0.88
VRK1-205ENST00000555402 HP1BP3Q5SSJ5 553 aaPredicted RBP9.53□□□□□ -0.88
VRK1-205ENST00000555402 ALKBH2Q6NS38 261 aa9.53□□□□□ -0.88
VRK1-205ENST00000555402 ATG4DQ86TL0 474 aaPredicted RBP9.53□□□□□ -0.88
VRK1-205ENST00000555402 AMOTL2Q9Y2J4 779 aa9.53□□□□□ -0.88
VRK1-205ENST00000555402 DYNC1LI2O43237 492 aaPredicted RBP9.52□□□□□ -0.89
VRK1-205ENST00000555402 BNIP3Q12983 259 aa9.52□□□□□ -0.89
VRK1-205ENST00000555402 SPOCD1Q6ZMY3 1216 aa9.52□□□□□ -0.89
VRK1-205ENST00000555402 MISP3Q96FF7 219 aa9.52□□□□□ -0.89
VRK1-205ENST00000555402 CLEC4MQ9H2X3 399 aaPredicted RBP9.52□□□□□ -0.89
VRK1-205ENST00000555402 ZFYVE1Q9HBF4 777 aa9.52□□□□□ -0.89
VRK1-205ENST00000555402 A0A096LPE4 126 aa9.51□□□□□ -0.89
VRK1-205ENST00000555402 A0A1W2PPZ6 126 aa9.51□□□□□ -0.89
VRK1-205ENST00000555402 EHHADHQ08426 723 aa9.51□□□□□ -0.89
VRK1-205ENST00000555402 LGR6Q9HBX8 967 aa9.51□□□□□ -0.89
VRK1-205ENST00000555402 DAGLAQ9Y4D2 1042 aa9.51□□□□□ -0.89
VRK1-205ENST00000555402 GLIS3Q8NEA6 775 aa9.5□□□□□ -0.89
VRK1-205ENST00000555402 GTF3C2Q8WUA4 911 aaPredicted RBP9.5□□□□□ -0.89
VRK1-205ENST00000555402 ZFYVE28Q9HCC9 887 aa9.5□□□□□ -0.89
VRK1-205ENST00000555402 AP4E1Q9UPM8 1137 aa9.5□□□□□ -0.89
VRK1-205ENST00000555402 USTQ9Y2C2 406 aa9.5□□□□□ -0.89
VRK1-205ENST00000555402 FUT4P22083 530 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms