RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 DPF2Q92785 391 aa12.01□□□□□ -0.49
PSEN1-213ENST00000555386 GCC1Q96CN9 775 aa12.01□□□□□ -0.49
PSEN1-213ENST00000555386 LNPKQ9C0E8 428 aa12.01□□□□□ -0.49
PSEN1-213ENST00000555386 HMG20BQ9P0W2 317 aa12.01□□□□□ -0.49
PSEN1-213ENST00000555386 TTF2Q9UNY4 1162 aaKnown RBP12.01□□□□□ -0.49
PSEN1-213ENST00000555386 KIF4BQ2VIQ3 1234 aa12□□□□□ -0.49
PSEN1-213ENST00000555386 SPATA5Q8NB90 893 aa12□□□□□ -0.49
PSEN1-213ENST00000555386 WDR66Q8TBY9 1149 aa12□□□□□ -0.49
PSEN1-213ENST00000555386 OTUD7AQ8TE49 926 aaPredicted RBP12□□□□□ -0.49
PSEN1-213ENST00000555386 GMLQ99445 158 aa12□□□□□ -0.49
PSEN1-213ENST00000555386 DNAJC2Q99543 621 aaKnown RBP12□□□□□ -0.49
PSEN1-213ENST00000555386 MYOZ2Q9NPC6 264 aa12□□□□□ -0.49
PSEN1-213ENST00000555386 ADARB2Q9NS39 739 aaKnown RBP12□□□□□ -0.49
PSEN1-213ENST00000555386 HDAC9Q9UKV0 1011 aa12□□□□□ -0.49
PSEN1-213ENST00000555386 PCDHAC2Q9Y5I4 1007 aa12□□□□□ -0.49
PSEN1-213ENST00000555386 MYO3BQ8WXR4 1341 aa11.99□□□□□ -0.49
PSEN1-213ENST00000555386 ARID4AP29374 1257 aaPredicted RBP11.99□□□□□ -0.49
PSEN1-213ENST00000555386 PRDX5P30044 214 aa11.99□□□□□ -0.49
PSEN1-213ENST00000555386 ZAP70P43403 619 aa11.99□□□□□ -0.49
PSEN1-213ENST00000555386 SMC5Q8IY18 1101 aa11.99□□□□□ -0.49
PSEN1-213ENST00000555386 TBC1D22AQ8WUA7 517 aa11.99□□□□□ -0.49
PSEN1-213ENST00000555386 BOLA2Q9H3K6 86 aa11.99□□□□□ -0.49
PSEN1-213ENST00000555386 DAXXQ9UER7 740 aaPredicted RBP11.99□□□□□ -0.49
PSEN1-213ENST00000555386 SCAF8Q9UPN6 1271 aaKnown RBP11.99□□□□□ -0.49
PSEN1-213ENST00000555386 MYH2Q9UKX2 1941 aa11.99□□□□□ -0.49
PSEN1-213ENST00000555386 ASTN2O75129 1339 aaPredicted RBP11.99□□□□□ -0.49
PSEN1-213ENST00000555386 SEMA3EO15041 775 aa11.98□□□□□ -0.49
PSEN1-213ENST00000555386 LDHBP07195 334 aaKnown RBP11.98□□□□□ -0.49
PSEN1-213ENST00000555386 HIRAP54198 1017 aaPredicted RBP11.98□□□□□ -0.49
PSEN1-213ENST00000555386 RAI14Q9P0K7 980 aa11.98□□□□□ -0.49
PSEN1-213ENST00000555386 LRP2BPQ9P2M1 347 aa11.98□□□□□ -0.49
PSEN1-213ENST00000555386 MAP4K4O95819 1239 aaPredicted RBP11.97□□□□□ -0.49
PSEN1-213ENST00000555386 DLGAP5Q15398 846 aa11.97□□□□□ -0.49
PSEN1-213ENST00000555386 DIXDC1Q155Q3 683 aa11.97□□□□□ -0.49
PSEN1-213ENST00000555386 NBPF9Q3BBW0 867 aa11.97□□□□□ -0.49
PSEN1-213ENST00000555386 CFAP100Q494V2 611 aa11.97□□□□□ -0.49
PSEN1-213ENST00000555386 MAP1SQ66K74 1059 aaPredicted RBP11.97□□□□□ -0.49
PSEN1-213ENST00000555386 USP50Q70EL3 339 aaPredicted RBP11.97□□□□□ -0.49
PSEN1-213ENST00000555386 PNMA8AQ86V59 439 aaPredicted RBP11.97□□□□□ -0.49
PSEN1-213ENST00000555386 DZIP1Q86YF9 867 aaKnown RBP11.97□□□□□ -0.49
PSEN1-213ENST00000555386 EDC3Q96F86 508 aaKnown RBP11.97□□□□□ -0.49
PSEN1-213ENST00000555386 GPATCH3Q96I76 525 aa11.97□□□□□ -0.49
PSEN1-213ENST00000555386 GOLIM4O00461 696 aa11.96□□□□□ -0.49
PSEN1-213ENST00000555386 CYP2E1P05181 493 aaPredicted RBP11.96□□□□□ -0.49
PSEN1-213ENST00000555386 CRKP46108 304 aa11.96□□□□□ -0.49
PSEN1-213ENST00000555386 ZNF280AP59817 542 aaPredicted RBP11.96□□□□□ -0.49
PSEN1-213ENST00000555386 FKBP1AP62942 108 aaKnown RBP11.96□□□□□ -0.49
PSEN1-213ENST00000555386 ANTXR1Q9H6X2 564 aa11.96□□□□□ -0.49
PSEN1-213ENST00000555386 UPF2Q9HAU5 1272 aaKnown RBP11.96□□□□□ -0.49
PSEN1-213ENST00000555386 PIH1D3Q9NQM4 214 aaKnown RBP11.96□□□□□ -0.49
PSEN1-213ENST00000555386 AK9Q5TCS8 1911 aa11.96□□□□□ -0.49
PSEN1-213ENST00000555386 CLRN2A0PK11 232 aa11.95□□□□□ -0.5
PSEN1-213ENST00000555386 IDH1O75874 414 aaKnown RBP11.95□□□□□ -0.5
PSEN1-213ENST00000555386 TOMM70O94826 608 aa11.95□□□□□ -0.5
PSEN1-213ENST00000555386 NUCB1Q02818 461 aa11.95□□□□□ -0.5
PSEN1-213ENST00000555386 SPTY2D1Q68D10 685 aaPredicted RBP11.95□□□□□ -0.5
PSEN1-213ENST00000555386 DLK2Q6UY11 383 aa11.95□□□□□ -0.5
PSEN1-213ENST00000555386 CHD1LQ86WJ1 897 aa11.95□□□□□ -0.5
PSEN1-213ENST00000555386 LDHDQ86WU2 507 aa11.95□□□□□ -0.5
PSEN1-213ENST00000555386 ZGPATQ8N5A5 531 aaKnown RBP11.95□□□□□ -0.5
PSEN1-213ENST00000555386 TEKT1Q969V4 418 aa11.95□□□□□ -0.5
PSEN1-213ENST00000555386 RNF39Q9H2S5 420 aa11.95□□□□□ -0.5
PSEN1-213ENST00000555386 ECHDC1Q9NTX5 307 aa11.95□□□□□ -0.5
PSEN1-213ENST00000555386 GGA3Q9NZ52 723 aa11.95□□□□□ -0.5
PSEN1-213ENST00000555386 WNT10BO00744 389 aa11.95□□□□□ -0.5
PSEN1-213ENST00000555386 ATP5JP18859 108 aa11.95□□□□□ -0.5
PSEN1-213ENST00000555386 MX1P20591 662 aa11.95□□□□□ -0.5
PSEN1-213ENST00000555386 MECOMQ03112 1051 aa11.95□□□□□ -0.5
PSEN1-213ENST00000555386 ANGEL2Q5VTE6 544 aaKnown RBP11.95□□□□□ -0.5
PSEN1-213ENST00000555386 CHADLQ6NUI6 762 aa11.95□□□□□ -0.5
PSEN1-213ENST00000555386 ZNF512BQ96KM6 892 aaPredicted RBP11.95□□□□□ -0.5
PSEN1-213ENST00000555386 VEZTQ9HBM0 779 aa11.95□□□□□ -0.5
PSEN1-213ENST00000555386 AOX1Q06278 1338 aa11.94□□□□□ -0.5
PSEN1-213ENST00000555386 CAPN15O75808 1086 aa11.94□□□□□ -0.5
PSEN1-213ENST00000555386 FMR1Q06787 632 aaKnown RBP eCLIP11.94□□□□□ -0.5
PSEN1-213ENST00000555386 NBR1Q14596 966 aa11.94□□□□□ -0.5
PSEN1-213ENST00000555386 USP48Q86UV5 1035 aa11.94□□□□□ -0.5
PSEN1-213ENST00000555386 SMC1BQ8NDV3 1235 aa11.94□□□□□ -0.5
PSEN1-213ENST00000555386 DCPSQ96C86 337 aaKnown RBP11.94□□□□□ -0.5
PSEN1-213ENST00000555386 PRMT6Q96LA8 375 aaPredicted RBP11.94□□□□□ -0.5
PSEN1-213ENST00000555386 GLIS2Q9BZE0 524 aaPredicted RBP11.94□□□□□ -0.5
PSEN1-213ENST00000555386 TDRD3Q9H7E2 651 aaKnown RBP11.94□□□□□ -0.5
PSEN1-213ENST00000555386 PAG1Q9NWQ8 432 aa11.94□□□□□ -0.5
PSEN1-213ENST00000555386 MAST3O60307 1309 aa11.94□□□□□ -0.5
PSEN1-213ENST00000555386 SALL1Q9NSC2 1324 aa11.94□□□□□ -0.5
PSEN1-213ENST00000555386 ECM29Q5VYK3 1845 aa11.93□□□□□ -0.5
PSEN1-213ENST00000555386 MYH7P12883 1935 aa11.93□□□□□ -0.5
PSEN1-213ENST00000555386 SPDYE2BA6NHP3 402 aa11.93□□□□□ -0.5
PSEN1-213ENST00000555386 ADM5C9JUS6 153 aa11.93□□□□□ -0.5
PSEN1-213ENST00000555386 TRAF5O00463 557 aa11.93□□□□□ -0.5
PSEN1-213ENST00000555386 SPDYE6P0CI01 402 aa11.93□□□□□ -0.5
PSEN1-213ENST00000555386 CACNB3P54284 484 aa11.93□□□□□ -0.5
PSEN1-213ENST00000555386 BECN1Q14457 450 aa11.93□□□□□ -0.5
PSEN1-213ENST00000555386 CNTROBQ8N137 903 aa11.93□□□□□ -0.5
PSEN1-213ENST00000555386 RBM46Q8TBY0 533 aaKnown RBP11.93□□□□□ -0.5
PSEN1-213ENST00000555386 ZNF408Q9H9D4 720 aa11.93□□□□□ -0.5
PSEN1-213ENST00000555386 SERPINA10Q9UK55 444 aa11.93□□□□□ -0.5
PSEN1-213ENST00000555386 SUGT1Q9Y2Z0 365 aa11.93□□□□□ -0.5
PSEN1-213ENST00000555386 PDS5AQ29RF7 1337 aaKnown RBP11.93□□□□□ -0.5
PSEN1-213ENST00000555386 ERC2O15083 957 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms