RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 COL9A3Q14050 684 aaPredicted RBP12.38□□□□□ -0.43
MTHFD1-210ENST00000555252 LRRC24Q50LG9 513 aa12.38□□□□□ -0.43
MTHFD1-210ENST00000555252 NBPF11Q86T75 865 aa12.38□□□□□ -0.43
MTHFD1-210ENST00000555252 RGS22Q8NE09 1264 aa12.38□□□□□ -0.43
MTHFD1-210ENST00000555252 UBXN6Q9BZV1 441 aa12.38□□□□□ -0.43
MTHFD1-210ENST00000555252 TRMT1Q9NXH9 659 aaKnown RBP12.38□□□□□ -0.43
MTHFD1-210ENST00000555252 ABCA3Q99758 1704 aa12.38□□□□□ -0.43
MTHFD1-210ENST00000555252 EFCAB8A8MWE9 144 aa12.38□□□□□ -0.43
MTHFD1-210ENST00000555252 STARD3NLO95772 234 aa12.38□□□□□ -0.43
MTHFD1-210ENST00000555252 HSPD1P10809 573 aaKnown RBP12.38□□□□□ -0.43
MTHFD1-210ENST00000555252 ERCC6LQ2NKX8 1250 aa12.38□□□□□ -0.43
MTHFD1-210ENST00000555252 UBXN4Q92575 508 aa12.38□□□□□ -0.43
MTHFD1-210ENST00000555252 ZNF274Q96GC6 653 aaPredicted RBP12.38□□□□□ -0.43
MTHFD1-210ENST00000555252 DNAI1Q9UI46 699 aa12.38□□□□□ -0.43
MTHFD1-210ENST00000555252 MAST3O60307 1309 aa12.37□□□□□ -0.43
MTHFD1-210ENST00000555252 CDHR2Q9BYE9 1310 aa12.37□□□□□ -0.43
MTHFD1-210ENST00000555252 CSF1RP07333 972 aa12.37□□□□□ -0.43
MTHFD1-210ENST00000555252 PLA2G4AP47712 749 aa12.37□□□□□ -0.43
MTHFD1-210ENST00000555252 SCRN1Q12765 414 aa12.37□□□□□ -0.43
MTHFD1-210ENST00000555252 HSP90AB3PQ58FF7 597 aa12.37□□□□□ -0.43
MTHFD1-210ENST00000555252 TTC39AQ5SRH9 613 aa12.37□□□□□ -0.43
MTHFD1-210ENST00000555252 GORABQ5T7V8 394 aa12.37□□□□□ -0.43
MTHFD1-210ENST00000555252 STOX1Q6ZVD7 989 aa12.37□□□□□ -0.43
MTHFD1-210ENST00000555252 AOPEPQ8N6M6 819 aa12.37□□□□□ -0.43
MTHFD1-210ENST00000555252 ORC3Q9UBD5 711 aaPredicted RBP12.37□□□□□ -0.43
MTHFD1-210ENST00000555252 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.37□□□□□ -0.43
MTHFD1-210ENST00000555252 LTBP4Q8N2S1 1624 aa12.37□□□□□ -0.43
MTHFD1-210ENST00000555252 E7EWF7 191 aa12.36□□□□□ -0.43
MTHFD1-210ENST00000555252 JAK2O60674 1132 aa12.36□□□□□ -0.43
MTHFD1-210ENST00000555252 ARHGAP29Q52LW3 1261 aa12.36□□□□□ -0.43
MTHFD1-210ENST00000555252 ADALQ6DHV7 355 aa12.36□□□□□ -0.43
MTHFD1-210ENST00000555252 SYT10Q6XYQ8 523 aa12.36□□□□□ -0.43
MTHFD1-210ENST00000555252 ZBTB38Q8NAP3 1195 aaPredicted RBP12.36□□□□□ -0.43
MTHFD1-210ENST00000555252 MRPS27Q92552 414 aaKnown RBP12.36□□□□□ -0.43
MTHFD1-210ENST00000555252 ZNF594Q96JF6 807 aaPredicted RBP12.36□□□□□ -0.43
MTHFD1-210ENST00000555252 GOLGA6L9A6NEM1 432 aa12.36□□□□□ -0.43
MTHFD1-210ENST00000555252 ERICH4A6NGS2 130 aa12.36□□□□□ -0.43
MTHFD1-210ENST00000555252 IKBKBO14920 756 aa12.36□□□□□ -0.43
MTHFD1-210ENST00000555252 ZRSR1Q15695 479 aaKnown RBP12.36□□□□□ -0.43
MTHFD1-210ENST00000555252 TAF7LQ5H9L4 462 aa12.36□□□□□ -0.43
MTHFD1-210ENST00000555252 FMR1NBQ8N0W7 255 aaPredicted RBP12.36□□□□□ -0.43
MTHFD1-210ENST00000555252 NSUN7Q8NE18 718 aaKnown RBP12.36□□□□□ -0.43
MTHFD1-210ENST00000555252 GOLPH3LQ9H4A5 285 aa12.36□□□□□ -0.43
MTHFD1-210ENST00000555252 PSD3Q9NYI0 1048 aa12.36□□□□□ -0.43
MTHFD1-210ENST00000555252 HNRNPH2P55795 449 aaKnown RBP12.35□□□□□ -0.43
MTHFD1-210ENST00000555252 IFIT5Q13325 482 aaKnown RBP12.35□□□□□ -0.43
MTHFD1-210ENST00000555252 FSIP1Q8NA03 581 aa12.35□□□□□ -0.43
MTHFD1-210ENST00000555252 STRN4Q9NRL3 753 aa12.35□□□□□ -0.43
MTHFD1-210ENST00000555252 CCDC9Q9Y3X0 531 aaKnown RBP12.35□□□□□ -0.43
MTHFD1-210ENST00000555252 DDX60Q8IY21 1712 aaKnown RBP12.35□□□□□ -0.43
MTHFD1-210ENST00000555252 MAP3K15Q6ZN16 1313 aa12.35□□□□□ -0.43
MTHFD1-210ENST00000555252 CBFA2T2O43439 604 aa12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 TADA3O75528 432 aa12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 CHGBP05060 677 aa12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 EVCP57679 992 aa12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 PDE4CQ08493 712 aa12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 JAKMIP3Q5VZ66 844 aa12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 ARMCX5Q6P1M9 558 aa12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 MNS1Q8NEH6 495 aa12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 XAGE2Q96GT9 111 aa12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 MPHOSPH8Q99549 860 aa12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 PUS3Q9BZE2 481 aaKnown RBP12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 RTEL1Q9NZ71 1219 aa12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 CWC15Q9P013 229 aaKnown RBP12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 KIAA1468Q9P260 1216 aa12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 SALL1Q9NSC2 1324 aa12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 TOGARAM1Q9Y4F4 1720 aa12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 ZSCAN12O43309 604 aa12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 CAPN2P17655 700 aa12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 IMMTQ16891 758 aaKnown RBP12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 GIGYF2Q6Y7W6 1299 aaKnown RBP12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 TMC6Q7Z403 805 aa12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 APPBP2Q92624 585 aa12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 ZNF512BQ96KM6 892 aaPredicted RBP12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 USP28Q96RU2 1077 aa12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 XPO4Q9C0E2 1151 aaKnown RBP12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 NAP1L2Q9ULW6 460 aaPredicted RBP12.34□□□□□ -0.43
MTHFD1-210ENST00000555252 WDR19Q8NEZ3 1342 aa12.33□□□□□ -0.43
MTHFD1-210ENST00000555252 PTPDC1A2A3K4 754 aa12.33□□□□□ -0.44
MTHFD1-210ENST00000555252 M0R2C6 588 aa12.33□□□□□ -0.44
MTHFD1-210ENST00000555252 DTNBO60941 627 aa12.33□□□□□ -0.44
MTHFD1-210ENST00000555252 YEATS4O95619 227 aa12.33□□□□□ -0.44
MTHFD1-210ENST00000555252 NLRP12P59046 1061 aa12.33□□□□□ -0.44
MTHFD1-210ENST00000555252 FKBP4Q02790 459 aaKnown RBP eCLIP12.33□□□□□ -0.44
MTHFD1-210ENST00000555252 APOBRQ0VD83 1088 aa12.33□□□□□ -0.44
MTHFD1-210ENST00000555252 MSL3Q8N5Y2 521 aaKnown RBP12.33□□□□□ -0.44
MTHFD1-210ENST00000555252 GPR161Q8N6U8 529 aaKnown RBP12.33□□□□□ -0.44
MTHFD1-210ENST00000555252 KCNG4Q8TDN1 519 aa12.33□□□□□ -0.44
MTHFD1-210ENST00000555252 DDX11Q96FC9 970 aa12.33□□□□□ -0.44
MTHFD1-210ENST00000555252 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.33□□□□□ -0.443e-6■■■■□ 25.4
MTHFD1-210ENST00000555252 DHX16O60231 1041 aaKnown RBP12.33□□□□□ -0.44
MTHFD1-210ENST00000555252 PDIA3P30101 505 aaKnown RBP12.33□□□□□ -0.44
MTHFD1-210ENST00000555252 HOMER1Q86YM7 354 aa12.33□□□□□ -0.44
MTHFD1-210ENST00000555252 DNAJC10Q8IXB1 793 aa12.33□□□□□ -0.44
MTHFD1-210ENST00000555252 CERKQ8TCT0 537 aa12.33□□□□□ -0.44
MTHFD1-210ENST00000555252 OSBP2Q969R2 916 aa12.33□□□□□ -0.44
MTHFD1-210ENST00000555252 TMX1Q9H3N1 280 aa12.33□□□□□ -0.44
MTHFD1-210ENST00000555252 ST7Q9NRC1 585 aa12.33□□□□□ -0.44
MTHFD1-210ENST00000555252 SMC2O95347 1197 aa12.32□□□□□ -0.44
MTHFD1-210ENST00000555252 CTDNEP1O95476 244 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms