RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 SNX29Q8TEQ0 813 aa10.07□□□□□ -0.8
VRK1-203ENST00000555067 FBLIM1Q8WUP2 373 aa10.07□□□□□ -0.8
VRK1-203ENST00000555067 BSNDQ8WZ55 320 aa10.07□□□□□ -0.8
VRK1-203ENST00000555067 NXPE3Q969Y0 559 aa10.07□□□□□ -0.8
VRK1-203ENST00000555067 CHRDQ9H2X0 955 aa10.07□□□□□ -0.8
VRK1-203ENST00000555067 FKBP4Q02790 459 aaKnown RBP eCLIP10.06□□□□□ -0.8
VRK1-203ENST00000555067 IKBKEQ14164 716 aa10.06□□□□□ -0.8
VRK1-203ENST00000555067 C2CD4AQ8NCU7 369 aaPredicted RBP10.06□□□□□ -0.8
VRK1-203ENST00000555067 PAK6Q9NQU5 681 aaPredicted RBP10.06□□□□□ -0.8
VRK1-203ENST00000555067 PRKAG2Q9UGJ0 569 aa10.06□□□□□ -0.8
VRK1-203ENST00000555067 DRD2P14416 443 aa10.05□□□□□ -0.8
VRK1-203ENST00000555067 EXOSC6Q5RKV6 272 aaKnown RBP10.05□□□□□ -0.8
VRK1-203ENST00000555067 AGBL5Q8NDL9 886 aa10.05□□□□□ -0.8
VRK1-203ENST00000555067 USP26Q9BXU7 913 aa10.05□□□□□ -0.8
VRK1-203ENST00000555067 PHACTR2O75167 634 aa10.04□□□□□ -0.8
VRK1-203ENST00000555067 TNFRSF21O75509 655 aa10.04□□□□□ -0.8
VRK1-203ENST00000555067 ABL1P00519 1130 aa10.04□□□□□ -0.8
VRK1-203ENST00000555067 LCE4AQ5TA78 99 aa10.04□□□□□ -0.8
VRK1-203ENST00000555067 TBC1D32Q96NH3 1257 aa10.04□□□□□ -0.8
VRK1-203ENST00000555067 KRTAP4-2Q9BYR5 136 aa10.04□□□□□ -0.8
VRK1-203ENST00000555067 FZD6O60353 706 aa10.03□□□□□ -0.8
VRK1-203ENST00000555067 EDN3P14138 238 aa10.03□□□□□ -0.8
VRK1-203ENST00000555067 USP11P51784 963 aa10.03□□□□□ -0.8
VRK1-203ENST00000555067 CARNS1A5YM72 827 aa10.02□□□□□ -0.81
VRK1-203ENST00000555067 FAM170BA6NMN3 283 aa10.02□□□□□ -0.81
VRK1-203ENST00000555067 SOX4Q06945 474 aaPredicted RBP10.02□□□□□ -0.81
VRK1-203ENST00000555067 FLCNQ8NFG4 579 aa10.02□□□□□ -0.81
VRK1-203ENST00000555067 OSMRQ99650 979 aa10.02□□□□□ -0.81
VRK1-203ENST00000555067 ZKSCAN3Q9BRR0 538 aa10.02□□□□□ -0.81
VRK1-203ENST00000555067 EGFL7Q9UHF1 273 aa10.02□□□□□ -0.81
VRK1-203ENST00000555067 EREGO14944 169 aa10.01□□□□□ -0.81
VRK1-203ENST00000555067 PAPLNO95428 1278 aa10.01□□□□□ -0.81
VRK1-203ENST00000555067 ZNF211Q13398 564 aaPredicted RBP10.01□□□□□ -0.81
VRK1-203ENST00000555067 GJD3Q8N144 294 aa10.01□□□□□ -0.81
VRK1-203ENST00000555067 NRSN2Q9GZP1 204 aa10.01□□□□□ -0.81
VRK1-203ENST00000555067 ESRRAP11474 423 aaPredicted RBP10□□□□□ -0.81
VRK1-203ENST00000555067 BHLHE41Q9C0J9 482 aaPredicted RBP10□□□□□ -0.81
VRK1-203ENST00000555067 ZC3H7BQ9UGR2 993 aaKnown RBP10□□□□□ -0.81
VRK1-203ENST00000555067 YIPF2Q9BWQ6 316 aa9.99□□□□□ -0.81
VRK1-203ENST00000555067 FOXD3Q9UJU5 478 aaPredicted RBP9.99□□□□□ -0.81
VRK1-203ENST00000555067 AMOTL2Q9Y2J4 779 aa9.99□□□□□ -0.81
VRK1-203ENST00000555067 ERICH6Q7L0X2 663 aa9.98□□□□□ -0.81
VRK1-203ENST00000555067 WFDC3Q8IUB2 231 aa9.98□□□□□ -0.81
VRK1-203ENST00000555067 ANO2Q9NQ90 1003 aa9.98□□□□□ -0.81
VRK1-203ENST00000555067 CCDC87Q9NVE4 849 aa9.98□□□□□ -0.81
VRK1-203ENST00000555067 ICMTO60725 284 aa9.97□□□□□ -0.81
VRK1-203ENST00000555067 ADH5P11766 374 aa9.96□□□□□ -0.82
VRK1-203ENST00000555067 ACTL7BQ9Y614 415 aa9.96□□□□□ -0.82
VRK1-203ENST00000555067 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.96□□□□□ -0.82
VRK1-203ENST00000555067 H3BRB1 525 aa9.95□□□□□ -0.82
VRK1-203ENST00000555067 DUSP27Q5VZP5 1158 aa9.95□□□□□ -0.82
VRK1-203ENST00000555067 GLYCTKQ8IVS8 523 aa9.95□□□□□ -0.82
VRK1-203ENST00000555067 TUT1Q9H6E5 874 aaKnown RBP9.95□□□□□ -0.82
VRK1-203ENST00000555067 CARMIL2Q6F5E8 1435 aa9.94□□□□□ -0.82
VRK1-203ENST00000555067 EIF4EBP3O60516 100 aaPredicted RBP9.94□□□□□ -0.82
VRK1-203ENST00000555067 CYP27A1Q02318 531 aa9.94□□□□□ -0.82
VRK1-203ENST00000555067 GSTM4Q03013 218 aa9.94□□□□□ -0.82
VRK1-203ENST00000555067 MAP7Q14244 749 aa9.94□□□□□ -0.82
VRK1-203ENST00000555067 ZNF765Q7L2R6 523 aa9.94□□□□□ -0.82
VRK1-203ENST00000555067 BCL7CQ8WUZ0 217 aaPredicted RBP9.94□□□□□ -0.82
VRK1-203ENST00000555067 ZFYVE28Q9HCC9 887 aa9.94□□□□□ -0.82
VRK1-203ENST00000555067 NFICP08651 508 aa9.93□□□□□ -0.82
VRK1-203ENST00000555067 ZNF648Q5T619 568 aaPredicted RBP9.93□□□□□ -0.82
VRK1-203ENST00000555067 PEAR1Q5VY43 1037 aaPredicted RBP9.93□□□□□ -0.82
VRK1-203ENST00000555067 SEZ6L2Q6UXD5 910 aa9.93□□□□□ -0.82
VRK1-203ENST00000555067 ASAP3Q8TDY4 903 aa9.93□□□□□ -0.82
VRK1-203ENST00000555067 SEMA6CQ9H3T2 930 aa9.93□□□□□ -0.82
VRK1-203ENST00000555067 BRPF3Q9ULD4 1205 aa9.93□□□□□ -0.82
VRK1-203ENST00000555067 SERPINB4P48594 390 aa9.92□□□□□ -0.82
VRK1-203ENST00000555067 ACSS3Q9H6R3 686 aa9.92□□□□□ -0.82
VRK1-203ENST00000555067 LATS2Q9NRM7 1088 aa9.92□□□□□ -0.82
VRK1-203ENST00000555067 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.91□□□□□ -0.82
VRK1-203ENST00000555067 NDUFB5O43674 189 aa9.91□□□□□ -0.82
VRK1-203ENST00000555067 NEFLP07196 543 aa9.91□□□□□ -0.82
VRK1-203ENST00000555067 CTSBP07858 339 aa9.91□□□□□ -0.82
VRK1-203ENST00000555067 GSX1Q9H4S2 264 aaPredicted RBP9.91□□□□□ -0.82
VRK1-203ENST00000555067 LRRC4CQ9HCJ2 640 aa9.91□□□□□ -0.82
VRK1-203ENST00000555067 SLC5A6Q9Y289 635 aa9.91□□□□□ -0.82
VRK1-203ENST00000555067 DBX1A6NMT0 343 aa9.9□□□□□ -0.82
VRK1-203ENST00000555067 PDE4CQ08493 712 aa9.9□□□□□ -0.82
VRK1-203ENST00000555067 ZNF792Q3KQV3 632 aa9.9□□□□□ -0.82
VRK1-203ENST00000555067 FBLN7Q53RD9 439 aa9.9□□□□□ -0.82
VRK1-203ENST00000555067 SPOCD1Q6ZMY3 1216 aa9.9□□□□□ -0.82
VRK1-203ENST00000555067 ZNF574Q6ZN55 896 aaPredicted RBP9.9□□□□□ -0.82
VRK1-203ENST00000555067 SPRED2Q7Z698 418 aa9.9□□□□□ -0.82
VRK1-203ENST00000555067 C1GALT1Q9NS00 363 aa9.9□□□□□ -0.82
VRK1-203ENST00000555067 PDE3BQ13370 1112 aa9.89□□□□□ -0.83
VRK1-203ENST00000555067 GALNT12Q8IXK2 581 aa9.89□□□□□ -0.83
VRK1-203ENST00000555067 BIN1O00499 593 aa9.88□□□□□ -0.83
VRK1-203ENST00000555067 RAB6AP20340 208 aa9.88□□□□□ -0.83
VRK1-203ENST00000555067 STK11IPQ8N1F8 1099 aa9.88□□□□□ -0.83
VRK1-203ENST00000555067 FAM105AQ9NUU6 356 aa9.88□□□□□ -0.83
VRK1-203ENST00000555067 METTL12A8MUP2 240 aa9.87□□□□□ -0.83
VRK1-203ENST00000555067 ARHGAP4P98171 946 aa9.87□□□□□ -0.83
VRK1-203ENST00000555067 PLCL1Q15111 1095 aa9.87□□□□□ -0.83
VRK1-203ENST00000555067 ZNF124Q15973 351 aa9.87□□□□□ -0.83
VRK1-203ENST00000555067 ECM1Q16610 540 aa9.87□□□□□ -0.83
VRK1-203ENST00000555067 CITED4Q96RK1 184 aa9.87□□□□□ -0.83
VRK1-203ENST00000555067 ARID3AQ99856 593 aa9.87□□□□□ -0.83
VRK1-203ENST00000555067 POLR3DP05423 398 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms