RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 RBM6P78332 1123 aaKnown RBP11.01□□□□□ -0.65
SYNE2-213ENST00000554805 CFAP100Q494V2 611 aa11.01□□□□□ -0.65
SYNE2-213ENST00000554805 BRAPQ7Z569 592 aa11.01□□□□□ -0.65
SYNE2-213ENST00000554805 ZCRB1Q8TBF4 217 aaKnown RBP11.01□□□□□ -0.65
SYNE2-213ENST00000554805 PUS7LQ9H0K6 701 aaKnown RBP11.01□□□□□ -0.65
SYNE2-213ENST00000554805 CNNM1Q9NRU3 951 aa11.01□□□□□ -0.65
SYNE2-213ENST00000554805 YEATS4O95619 227 aa11.01□□□□□ -0.65
SYNE2-213ENST00000554805 PFKFB1P16118 471 aa11.01□□□□□ -0.65
SYNE2-213ENST00000554805 ATP2B1P20020 1258 aa11.01□□□□□ -0.65
SYNE2-213ENST00000554805 METAP2P50579 478 aaKnown RBP eCLIP11.01□□□□□ -0.65
SYNE2-213ENST00000554805 SCARF1Q14162 830 aa11.01□□□□□ -0.65
SYNE2-213ENST00000554805 HSP90AA4PQ58FG1 418 aa11.01□□□□□ -0.65
SYNE2-213ENST00000554805 FAM177A1Q8N128 213 aaPredicted RBP11.01□□□□□ -0.65
SYNE2-213ENST00000554805 CCDC150Q8NCX0 1101 aa11.01□□□□□ -0.65
SYNE2-213ENST00000554805 APPBP2Q92624 585 aa11.01□□□□□ -0.65
SYNE2-213ENST00000554805 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.01□□□□□ -0.65
SYNE2-213ENST00000554805 SLAIN2Q9P270 581 aa11.01□□□□□ -0.65
SYNE2-213ENST00000554805 NLRP12P59046 1061 aa11□□□□□ -0.65
SYNE2-213ENST00000554805 OLFM4Q6UX06 510 aa11□□□□□ -0.65
SYNE2-213ENST00000554805 AGXT2Q9BYV1 514 aa11□□□□□ -0.65
SYNE2-213ENST00000554805 MEGF6O75095 1541 aa11□□□□□ -0.65
SYNE2-213ENST00000554805 KIF28PB7ZC32 967 aa11□□□□□ -0.65
SYNE2-213ENST00000554805 KIF2AO00139 706 aaPredicted RBP11□□□□□ -0.65
SYNE2-213ENST00000554805 PDILTQ8N807 584 aa11□□□□□ -0.65
SYNE2-213ENST00000554805 JMYQ8N9B5 988 aa11□□□□□ -0.65
SYNE2-213ENST00000554805 ZNF397Q8NF99 534 aaPredicted RBP11□□□□□ -0.65
SYNE2-213ENST00000554805 PHKBQ93100 1093 aa11□□□□□ -0.65
SYNE2-213ENST00000554805 GOLGB1Q14789 3259 aaKnown RBP11□□□□□ -0.65
SYNE2-213ENST00000554805 FANCCQ00597 558 aa11□□□□□ -0.65
SYNE2-213ENST00000554805 SYCP1Q15431 976 aa11□□□□□ -0.65
SYNE2-213ENST00000554805 PTPN21Q16825 1174 aa11□□□□□ -0.65
SYNE2-213ENST00000554805 SLC9C2Q5TAH2 1124 aa11□□□□□ -0.65
SYNE2-213ENST00000554805 UTP14CQ5TAP6 766 aaKnown RBP11□□□□□ -0.65
SYNE2-213ENST00000554805 LDHAL6AQ6ZMR3 332 aa11□□□□□ -0.65
SYNE2-213ENST00000554805 ERO1AQ96HE7 468 aa11□□□□□ -0.65
SYNE2-213ENST00000554805 UBASH3AP57075 661 aa10.99□□□□□ -0.65
SYNE2-213ENST00000554805 KIF6Q6ZMV9 814 aa10.99□□□□□ -0.65
SYNE2-213ENST00000554805 POLR3EQ9NVU0 708 aa10.99□□□□□ -0.65
SYNE2-213ENST00000554805 SALL1Q9NSC2 1324 aa10.99□□□□□ -0.65
SYNE2-213ENST00000554805 KIF23Q02241 960 aaPredicted RBP10.99□□□□□ -0.65
SYNE2-213ENST00000554805 RRP12Q5JTH9 1297 aaKnown RBP10.99□□□□□ -0.65
SYNE2-213ENST00000554805 CCDC82Q8N4S0 544 aa10.99□□□□□ -0.65
SYNE2-213ENST00000554805 MYL10Q9BUA6 226 aa10.99□□□□□ -0.65
SYNE2-213ENST00000554805 IMPACTQ9P2X3 320 aa10.99□□□□□ -0.65
SYNE2-213ENST00000554805 CDKL5O76039 1030 aa10.99□□□□□ -0.65
SYNE2-213ENST00000554805 CIAO1O76071 339 aa10.99□□□□□ -0.65
SYNE2-213ENST00000554805 ATP1A3P13637 1013 aa10.99□□□□□ -0.65
SYNE2-213ENST00000554805 CDK11BP21127 795 aaKnown RBP10.99□□□□□ -0.65
SYNE2-213ENST00000554805 DNAI1Q9UI46 699 aa10.99□□□□□ -0.65
SYNE2-213ENST00000554805 B4E1Z4 1266 aa10.98□□□□□ -0.65
SYNE2-213ENST00000554805 KRT40Q6A162 431 aa10.98□□□□□ -0.65
SYNE2-213ENST00000554805 NYAP1Q6ZVC0 841 aa10.98□□□□□ -0.65
SYNE2-213ENST00000554805 MB21D2Q8IYB1 491 aaPredicted RBP10.98□□□□□ -0.65
SYNE2-213ENST00000554805 MNS1Q8NEH6 495 aa10.98□□□□□ -0.65
SYNE2-213ENST00000554805 DENND2AQ9ULE3 1009 aa10.98□□□□□ -0.65
SYNE2-213ENST00000554805 GOLGA8AA7E2F4 631 aa10.98□□□□□ -0.65
SYNE2-213ENST00000554805 CMA1P23946 247 aa10.98□□□□□ -0.65
SYNE2-213ENST00000554805 IARSP41252 1262 aaKnown RBP10.98□□□□□ -0.65
SYNE2-213ENST00000554805 ANTXR2P58335 489 aa10.98□□□□□ -0.65
SYNE2-213ENST00000554805 PNOCQ13519 176 aa10.98□□□□□ -0.65
SYNE2-213ENST00000554805 ARMCX5Q6P1M9 558 aa10.98□□□□□ -0.65
SYNE2-213ENST00000554805 NBPF11Q86T75 865 aa10.98□□□□□ -0.65
SYNE2-213ENST00000554805 VPS37DQ86XT2 251 aa10.98□□□□□ -0.65
SYNE2-213ENST00000554805 CLIC6Q96NY7 704 aa10.98□□□□□ -0.65
SYNE2-213ENST00000554805 TMX1Q9H3N1 280 aa10.98□□□□□ -0.65
SYNE2-213ENST00000554805 TBC1D2BQ9UPU7 963 aa10.98□□□□□ -0.65
SYNE2-213ENST00000554805 HPS5Q9UPZ3 1129 aa10.98□□□□□ -0.65
SYNE2-213ENST00000554805 WDHD1O75717 1129 aaPredicted RBP10.97□□□□□ -0.65
SYNE2-213ENST00000554805 GOLGA8FQ08AF8 430 aa10.97□□□□□ -0.65
SYNE2-213ENST00000554805 GOLGA8DPQ0D2H9 430 aa10.97□□□□□ -0.65
SYNE2-213ENST00000554805 SPECC1Q5M775 1068 aa10.97□□□□□ -0.65
SYNE2-213ENST00000554805 KRT222Q8N1A0 295 aa10.97□□□□□ -0.65
SYNE2-213ENST00000554805 SYNE4Q8N205 404 aa10.97□□□□□ -0.65
SYNE2-213ENST00000554805 CNNM3Q8NE01 707 aa10.97□□□□□ -0.65
SYNE2-213ENST00000554805 PPP1R13BQ96KQ4 1090 aa10.97□□□□□ -0.65
SYNE2-213ENST00000554805 SLC26A6Q9BXS9 759 aa10.97□□□□□ -0.65
SYNE2-213ENST00000554805 OSBPL5Q9H0X9 879 aaPredicted RBP10.97□□□□□ -0.65
SYNE2-213ENST00000554805 ANGEL1Q9UNK9 670 aaKnown RBP10.97□□□□□ -0.65
SYNE2-213ENST00000554805 CBFA2T2O43439 604 aa10.97□□□□□ -0.65
SYNE2-213ENST00000554805 URI1O94763 535 aaPredicted RBP10.97□□□□□ -0.65
SYNE2-213ENST00000554805 TOP1P11387 765 aaKnown RBP10.97□□□□□ -0.65
SYNE2-213ENST00000554805 TCIRG1Q13488 830 aa10.97□□□□□ -0.65
SYNE2-213ENST00000554805 ERCC6LQ2NKX8 1250 aa10.97□□□□□ -0.65
SYNE2-213ENST00000554805 KMT5BQ4FZB7 885 aa10.97□□□□□ -0.65
SYNE2-213ENST00000554805 TMEM67Q5HYA8 995 aa10.97□□□□□ -0.65
SYNE2-213ENST00000554805 AIDAQ96BJ3 306 aa10.97□□□□□ -0.65
SYNE2-213ENST00000554805 DDX41Q9UJV9 622 aaKnown RBP10.97□□□□□ -0.65
SYNE2-213ENST00000554805 MYH15Q9Y2K3 1946 aa10.97□□□□□ -0.65
SYNE2-213ENST00000554805 C1orf167Q5SNV9 1468 aa10.97□□□□□ -0.65
SYNE2-213ENST00000554805 ZBTB43O43298 467 aa10.97□□□□□ -0.65
SYNE2-213ENST00000554805 SLC39A14Q15043 492 aa10.97□□□□□ -0.65
SYNE2-213ENST00000554805 E4F1Q66K89 784 aaPredicted RBP10.97□□□□□ -0.65
SYNE2-213ENST00000554805 FBXO38Q6PIJ6 1188 aa10.97□□□□□ -0.65
SYNE2-213ENST00000554805 BRINP3Q76B58 766 aa10.97□□□□□ -0.65
SYNE2-213ENST00000554805 MRC1P22897 1456 aa10.96□□□□□ -0.65
SYNE2-213ENST00000554805 SAFBQ15424 915 aaKnown RBP eCLIP10.96□□□□□ -0.65
SYNE2-213ENST00000554805 HELBQ8NG08 1087 aaPredicted RBP10.96□□□□□ -0.65
SYNE2-213ENST00000554805 IFIT3O14879 490 aaKnown RBP10.96□□□□□ -0.66
SYNE2-213ENST00000554805 MYL5Q02045 173 aa10.96□□□□□ -0.66
SYNE2-213ENST00000554805 CCDC102BQ68D86 513 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms