RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 CANXP27824 592 aaKnown RBP7.36□□□□□ -1.23
ATXN3-230ENST00000554673 MMP16P51512 607 aa7.36□□□□□ -1.23
ATXN3-230ENST00000554673 KLHDC4Q8TBB5 520 aa7.36□□□□□ -1.23
ATXN3-230ENST00000554673 SSH3Q8TE77 659 aa7.36□□□□□ -1.23
ATXN3-230ENST00000554673 FBXO41Q8TF61 875 aa7.36□□□□□ -1.23
ATXN3-230ENST00000554673 MYD88Q99836 296 aa7.36□□□□□ -1.23
ATXN3-230ENST00000554673 ZBTB3Q9H5J0 574 aa7.36□□□□□ -1.23
ATXN3-230ENST00000554673 HYPKQ9NX55 129 aa7.36□□□□□ -1.23
ATXN3-230ENST00000554673 PA2G4Q9UQ80 394 aaKnown RBP7.36□□□□□ -1.23
ATXN3-230ENST00000554673 RIC1Q4ADV7 1423 aa7.35□□□□□ -1.23
ATXN3-230ENST00000554673 COL15A1P39059 1388 aa7.35□□□□□ -1.23
ATXN3-230ENST00000554673 CACNA1SQ13698 1873 aa7.35□□□□□ -1.23
ATXN3-230ENST00000554673 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-230ENST00000554673 H7C1W4 665 aa7.35□□□□□ -1.23
ATXN3-230ENST00000554673 GSPT1P15170 499 aaKnown RBP7.35□□□□□ -1.23
ATXN3-230ENST00000554673 SKOR1P84550 965 aa7.35□□□□□ -1.23
ATXN3-230ENST00000554673 ATP8B2P98198 1209 aa7.35□□□□□ -1.23
ATXN3-230ENST00000554673 NUCB1Q02818 461 aa7.35□□□□□ -1.23
ATXN3-230ENST00000554673 MTX1Q13505 466 aa7.35□□□□□ -1.23
ATXN3-230ENST00000554673 GCKRQ14397 625 aa7.35□□□□□ -1.23
ATXN3-230ENST00000554673 LINS1Q8NG48 757 aa7.35□□□□□ -1.23
ATXN3-230ENST00000554673 PLBD2Q8NHP8 589 aa7.35□□□□□ -1.23
ATXN3-230ENST00000554673 IRF7Q92985 503 aa7.35□□□□□ -1.23
ATXN3-230ENST00000554673 SYTL4Q96C24 671 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-230ENST00000554673 USB1Q9BQ65 265 aaKnown RBP7.35□□□□□ -1.23
ATXN3-230ENST00000554673 STK31Q9BXU1 1019 aa7.35□□□□□ -1.23
ATXN3-230ENST00000554673 SRP68Q9UHB9 627 aaKnown RBP7.35□□□□□ -1.23
ATXN3-230ENST00000554673 ABCC12Q96J65 1359 aa7.34□□□□□ -1.23
ATXN3-230ENST00000554673 MAP3K15Q6ZN16 1313 aa7.34□□□□□ -1.23
ATXN3-230ENST00000554673 GRM8O00222 908 aa7.34□□□□□ -1.23
ATXN3-230ENST00000554673 SPTLC1O15269 473 aa7.34□□□□□ -1.23
ATXN3-230ENST00000554673 ALDH1L1O75891 902 aa7.34□□□□□ -1.23
ATXN3-230ENST00000554673 SASH1O94885 1247 aa7.34□□□□□ -1.23
ATXN3-230ENST00000554673 CCT4P50991 539 aaKnown RBP7.34□□□□□ -1.23
ATXN3-230ENST00000554673 ZNF827Q17R98 1081 aa7.34□□□□□ -1.23
ATXN3-230ENST00000554673 RABL6Q3YEC7 729 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-230ENST00000554673 MEX3CQ5U5Q3 659 aaKnown RBP7.34□□□□□ -1.23
ATXN3-230ENST00000554673 SND1Q7KZF4 910 aaKnown RBP eCLIP7.34□□□□□ -1.23
ATXN3-230ENST00000554673 PPP1R42Q7Z4L9 355 aa7.34□□□□□ -1.23
ATXN3-230ENST00000554673 RIC3Q7Z5B4 369 aa7.34□□□□□ -1.23
ATXN3-230ENST00000554673 ZNF34Q8IZ26 560 aa7.34□□□□□ -1.23
ATXN3-230ENST00000554673 TTC5Q8N0Z6 440 aa7.34□□□□□ -1.23
ATXN3-230ENST00000554673 SRCIN1Q9C0H9 1055 aa7.34□□□□□ -1.23
ATXN3-230ENST00000554673 BICC1Q9H694 974 aaKnown RBP7.34□□□□□ -1.23
ATXN3-230ENST00000554673 EXOC6BQ9Y2D4 811 aa7.34□□□□□ -1.23
ATXN3-230ENST00000554673 LRRC37AA6NMS7 1700 aa7.33□□□□□ -1.24
ATXN3-230ENST00000554673 CHD4Q14839 1912 aa7.33□□□□□ -1.24
ATXN3-230ENST00000554673 DXOO77932 396 aaKnown RBP7.33□□□□□ -1.24
ATXN3-230ENST00000554673 RGS3P49796 1198 aa7.33□□□□□ -1.24
ATXN3-230ENST00000554673 TSHZ3Q63HK5 1081 aa7.33□□□□□ -1.24
ATXN3-230ENST00000554673 NLRP10Q86W26 655 aa7.33□□□□□ -1.24
ATXN3-230ENST00000554673 PLEKHM2Q8IWE5 1019 aa7.33□□□□□ -1.24
ATXN3-230ENST00000554673 SPIRE2Q8WWL2 714 aa7.33□□□□□ -1.24
ATXN3-230ENST00000554673 LNPKQ9C0E8 428 aa7.33□□□□□ -1.24
ATXN3-230ENST00000554673 IL25Q9H293 177 aa7.33□□□□□ -1.24
ATXN3-230ENST00000554673 PRM3Q9NNZ6 103 aa7.33□□□□□ -1.24
ATXN3-230ENST00000554673 CCDC87Q9NVE4 849 aa7.33□□□□□ -1.24
ATXN3-230ENST00000554673 MYH7P12883 1935 aa7.33□□□□□ -1.24
ATXN3-230ENST00000554673 CARMIL3Q8ND23 1372 aa7.33□□□□□ -1.24
ATXN3-230ENST00000554673 CNTNAP4Q9C0A0 1308 aa7.32□□□□□ -1.24
ATXN3-230ENST00000554673 DOCK2Q92608 1830 aa7.32□□□□□ -1.24
ATXN3-230ENST00000554673 WTIPA6NIX2 430 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-230ENST00000554673 CAPN5O15484 640 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-230ENST00000554673 TRIM37O94972 964 aa7.32□□□□□ -1.24
ATXN3-230ENST00000554673 RBM6P78332 1123 aaKnown RBP7.32□□□□□ -1.24
ATXN3-230ENST00000554673 TCIRG1Q13488 830 aa7.32□□□□□ -1.24
ATXN3-230ENST00000554673 RTL5Q5HYW3 569 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-230ENST00000554673 ATG9AQ7Z3C6 839 aa7.32□□□□□ -1.24
ATXN3-230ENST00000554673 UBE3BQ7Z3V4 1068 aa7.32□□□□□ -1.24
ATXN3-230ENST00000554673 KRT27Q7Z3Y8 459 aa7.32□□□□□ -1.24
ATXN3-230ENST00000554673 TRIM46Q7Z4K8 759 aa7.32□□□□□ -1.24
ATXN3-230ENST00000554673 HLA-CQ95604 372 aa7.32□□□□□ -1.24
ATXN3-230ENST00000554673 TLR7Q9NYK1 1049 aaKnown RBP7.32□□□□□ -1.24
ATXN3-230ENST00000554673 WASF2Q9Y6W5 498 aa7.32□□□□□ -1.24
ATXN3-230ENST00000554673 IVNS1ABPQ9Y6Y0 642 aa7.32□□□□□ -1.24
ATXN3-230ENST00000554673 LOC100996750A0A140TA64 210 aa7.31□□□□□ -1.24
ATXN3-230ENST00000554673 GPR37L1O60883 481 aa7.31□□□□□ -1.24
ATXN3-230ENST00000554673 LILRB3O75022 631 aa7.31□□□□□ -1.24
ATXN3-230ENST00000554673 NTSR2O95665 410 aa7.31□□□□□ -1.24
ATXN3-230ENST00000554673 GNAI2P04899 355 aa7.31□□□□□ -1.24
ATXN3-230ENST00000554673 CHGBP05060 677 aa7.31□□□□□ -1.24
ATXN3-230ENST00000554673 LORP23490 312 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-230ENST00000554673 GPTP24298 496 aa7.31□□□□□ -1.24
ATXN3-230ENST00000554673 IL6STP40189 918 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-230ENST00000554673 WNT7BP56706 349 aa7.31□□□□□ -1.24
ATXN3-230ENST00000554673 TRIM28Q13263 835 aaKnown RBP7.31□□□□□ -1.24
ATXN3-230ENST00000554673 SUSD4Q5VX71 490 aa7.31□□□□□ -1.24
ATXN3-230ENST00000554673 RSBN1LQ6PCB5 846 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-230ENST00000554673 EHBP1Q8NDI1 1231 aa7.31□□□□□ -1.24
ATXN3-230ENST00000554673 KRTAP4-6Q9BYQ5 205 aa7.31□□□□□ -1.24
ATXN3-230ENST00000554673 BACH2Q9BYV9 841 aa7.31□□□□□ -1.24
ATXN3-230ENST00000554673 PUS3Q9BZE2 481 aaKnown RBP7.31□□□□□ -1.24
ATXN3-230ENST00000554673 PDGFDQ9GZP0 370 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-230ENST00000554673 NOP58Q9Y2X3 529 aaKnown RBP7.31□□□□□ -1.24
ATXN3-230ENST00000554673 LAMA4Q16363 1823 aa7.3□□□□□ -1.24
ATXN3-230ENST00000554673 CARNS1A5YM72 827 aa7.3□□□□□ -1.24
ATXN3-230ENST00000554673 GJA5P36382 358 aa7.3□□□□□ -1.24
ATXN3-230ENST00000554673 PTPN12Q05209 780 aaKnown RBP7.3□□□□□ -1.24
ATXN3-230ENST00000554673 AAMPQ13685 434 aa7.3□□□□□ -1.24
ATXN3-230ENST00000554673 CHD1LQ86WJ1 897 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms