RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 CADPS2Q86UW7 1296 aa15.75■□□□□ 0.11
VTI1B-204ENST00000554659 SGSM2O43147 1006 aa15.75■□□□□ 0.11
VTI1B-204ENST00000554659 NBPF6Q5VWK0 638 aa15.75■□□□□ 0.11
VTI1B-204ENST00000554659 DTHD1Q6ZMT9 781 aa15.75■□□□□ 0.11
VTI1B-204ENST00000554659 NBPF5PQ86XG9 351 aaPredicted RBP15.75■□□□□ 0.11
VTI1B-204ENST00000554659 NBPF4Q96M43 638 aa15.75■□□□□ 0.11
VTI1B-204ENST00000554659 PZPP20742 1482 aa15.75■□□□□ 0.11
VTI1B-204ENST00000554659 SBNO2Q9Y2G9 1366 aa15.74■□□□□ 0.11
VTI1B-204ENST00000554659 PHACTR2O75167 634 aa15.74■□□□□ 0.11
VTI1B-204ENST00000554659 TNNC1P63316 161 aa15.74■□□□□ 0.11
VTI1B-204ENST00000554659 GRIPAP1Q4V328 841 aa15.74■□□□□ 0.11
VTI1B-204ENST00000554659 IMPACTQ9P2X3 320 aa15.74■□□□□ 0.11
VTI1B-204ENST00000554659 ZMYM3Q14202 1370 aa15.74■□□□□ 0.11
VTI1B-204ENST00000554659 FAM76AQ8TAV0 307 aa15.74■□□□□ 0.11
VTI1B-204ENST00000554659 RRP36Q96EU6 259 aaKnown RBP15.74■□□□□ 0.11
VTI1B-204ENST00000554659 BICD1Q96G01 975 aa15.74■□□□□ 0.11
VTI1B-204ENST00000554659 DDX23Q9BUQ8 820 aaKnown RBP15.74■□□□□ 0.11
VTI1B-204ENST00000554659 LMBRD1Q9NUN5 540 aa15.74■□□□□ 0.11
VTI1B-204ENST00000554659 GNA11P29992 359 aa15.73■□□□□ 0.11
VTI1B-204ENST00000554659 MCM7P33993 719 aa15.73■□□□□ 0.11
VTI1B-204ENST00000554659 RIOK3O14730 519 aaKnown RBP15.73■□□□□ 0.11
VTI1B-204ENST00000554659 TTC31Q49AM3 519 aaPredicted RBP15.73■□□□□ 0.11
VTI1B-204ENST00000554659 ANO1Q5XXA6 986 aa15.73■□□□□ 0.11
VTI1B-204ENST00000554659 IQSEC3Q9UPP2 1182 aaPredicted RBP15.73■□□□□ 0.11
VTI1B-204ENST00000554659 HOXB7P09629 217 aa15.73■□□□□ 0.11
VTI1B-204ENST00000554659 CCDC122Q5T0U0 273 aa15.73■□□□□ 0.11
VTI1B-204ENST00000554659 MAGEB6Q8N7X4 407 aa15.73■□□□□ 0.11
VTI1B-204ENST00000554659 DDX21Q9NR30 783 aaKnown RBP eCLIP15.73■□□□□ 0.11
VTI1B-204ENST00000554659 TTF2Q9UNY4 1162 aaKnown RBP15.73■□□□□ 0.11
VTI1B-204ENST00000554659 ZBTB16Q05516 673 aa15.73■□□□□ 0.11
VTI1B-204ENST00000554659 CBX8Q9HC52 389 aa15.73■□□□□ 0.11
VTI1B-204ENST00000554659 ZEB2O60315 1214 aa15.72■□□□□ 0.11
VTI1B-204ENST00000554659 TMEM87BQ96K49 555 aa15.72■□□□□ 0.11
VTI1B-204ENST00000554659 KIF24Q5T7B8 1368 aa15.72■□□□□ 0.11
VTI1B-204ENST00000554659 ADAMTS2O95450 1211 aa15.72■□□□□ 0.11
VTI1B-204ENST00000554659 G2E3Q7L622 706 aa15.72■□□□□ 0.11
VTI1B-204ENST00000554659 ATP2A1O14983 1001 aa15.72■□□□□ 0.11
VTI1B-204ENST00000554659 C10orf67Q8IYJ2 551 aa15.72■□□□□ 0.11
VTI1B-204ENST00000554659 CEP83Q9Y592 693 aa15.72■□□□□ 0.11
VTI1B-204ENST00000554659 WDR62O43379 1518 aa15.72■□□□□ 0.11
VTI1B-204ENST00000554659 ARID5AQ03989 594 aa15.72■□□□□ 0.11
VTI1B-204ENST00000554659 FMNL3Q8IVF7 1028 aa15.72■□□□□ 0.11
VTI1B-204ENST00000554659 GTF3C6Q969F1 213 aa15.72■□□□□ 0.11
VTI1B-204ENST00000554659 CFAP57Q96MR6 1250 aa15.72■□□□□ 0.11
VTI1B-204ENST00000554659 SMC6Q96SB8 1091 aa15.72■□□□□ 0.11
VTI1B-204ENST00000554659 DNAJC21Q5F1R6 531 aaKnown RBP15.72■□□□□ 0.11
VTI1B-204ENST00000554659 IGSF22Q8N9C0 903 aa15.72■□□□□ 0.11
VTI1B-204ENST00000554659 NAPGQ99747 312 aaPredicted RBP15.72■□□□□ 0.11
VTI1B-204ENST00000554659 SELENOSQ9BQE4 189 aa15.72■□□□□ 0.11
VTI1B-204ENST00000554659 TRPM2O94759 1503 aa15.72■□□□□ 0.11
VTI1B-204ENST00000554659 IRX3P78415 501 aaPredicted RBP15.71■□□□□ 0.11
VTI1B-204ENST00000554659 CFAP58Q5T655 872 aa15.71■□□□□ 0.11
VTI1B-204ENST00000554659 APBB1IPQ7Z5R6 666 aaPredicted RBP15.71■□□□□ 0.11
VTI1B-204ENST00000554659 NFATC2IPQ8NCF5 419 aa15.71■□□□□ 0.11
VTI1B-204ENST00000554659 LEO1Q8WVC0 666 aaPredicted RBP15.71■□□□□ 0.11
VTI1B-204ENST00000554659 TRIM35Q9UPQ4 493 aa15.71■□□□□ 0.11
VTI1B-204ENST00000554659 TRAPPC8Q9Y2L5 1435 aa15.71■□□□□ 0.11
VTI1B-204ENST00000554659 RNMTO43148 476 aaKnown RBP15.71■□□□□ 0.11
VTI1B-204ENST00000554659 NLRP3Q96P20 1036 aa15.71■□□□□ 0.11
VTI1B-204ENST00000554659 KCNH3Q9ULD8 1083 aa15.71■□□□□ 0.11
VTI1B-204ENST00000554659 DNMT1P26358 1616 aaKnown RBP15.71■□□□□ 0.11
VTI1B-204ENST00000554659 ST5P78524 1137 aa15.71■□□□□ 0.11
VTI1B-204ENST00000554659 DCAF5Q96JK2 942 aa15.71■□□□□ 0.11
VTI1B-204ENST00000554659 CCDC114Q96M63 670 aa15.71■□□□□ 0.11
VTI1B-204ENST00000554659 U2AF2P26368 475 aaKnown RBP eCLIP15.71■□□□□ 0.1
VTI1B-204ENST00000554659 FANCCQ00597 558 aa15.71■□□□□ 0.1
VTI1B-204ENST00000554659 DEXIO95424 95 aa15.7■□□□□ 0.1
VTI1B-204ENST00000554659 RXRAP19793 462 aa15.7■□□□□ 0.1
VTI1B-204ENST00000554659 IL13P35225 146 aa15.7■□□□□ 0.1
VTI1B-204ENST00000554659 TNNI3KQ59H18 835 aa15.7■□□□□ 0.1
VTI1B-204ENST00000554659 SREK1Q8WXA9 508 aaKnown RBP15.7■□□□□ 0.1
VTI1B-204ENST00000554659 IFT81Q8WYA0 676 aa15.7■□□□□ 0.1
VTI1B-204ENST00000554659 MTRF1LQ9UGC7 380 aaKnown RBP15.7■□□□□ 0.1
VTI1B-204ENST00000554659 MRVI1Q9Y6F6 885 aa15.7■□□□□ 0.1
VTI1B-204ENST00000554659 FPGT-TNNI3KV9GXZ4 949 aa15.7■□□□□ 0.1
VTI1B-204ENST00000554659 TEX14Q8IWB6 1497 aa15.7■□□□□ 0.1
VTI1B-204ENST00000554659 CHL1O00533 1208 aa15.7■□□□□ 0.1
VTI1B-204ENST00000554659 RFC4P35249 363 aa15.7■□□□□ 0.1
VTI1B-204ENST00000554659 PPM1FP49593 454 aaPredicted RBP15.7■□□□□ 0.1
VTI1B-204ENST00000554659 GABPB1Q06547 395 aaPredicted RBP15.7■□□□□ 0.1
VTI1B-204ENST00000554659 CPLX4Q7Z7G2 160 aa15.7■□□□□ 0.1
VTI1B-204ENST00000554659 LRRC59Q96AG4 307 aaKnown RBP15.7■□□□□ 0.1
VTI1B-204ENST00000554659 CUTAO60888 179 aa15.7■□□□□ 0.1
VTI1B-204ENST00000554659 HS2ST1Q7LGA3 356 aa15.7■□□□□ 0.1
VTI1B-204ENST00000554659 SMARCC2Q8TAQ2 1214 aa15.7■□□□□ 0.1
VTI1B-204ENST00000554659 IRS4O14654 1257 aaPredicted RBP15.7■□□□□ 0.1
VTI1B-204ENST00000554659 PLCG2P16885 1265 aa15.7■□□□□ 0.1
VTI1B-204ENST00000554659 HOXC9P31274 260 aa15.7■□□□□ 0.1
VTI1B-204ENST00000554659 PLCD1P51178 756 aa15.7■□□□□ 0.1
VTI1B-204ENST00000554659 CYP26C1Q6V0L0 522 aa15.7■□□□□ 0.1
VTI1B-204ENST00000554659 ZNF804AQ7Z570 1209 aa15.7■□□□□ 0.1
VTI1B-204ENST00000554659 MLKLQ8NB16 471 aa15.69■□□□□ 0.1
VTI1B-204ENST00000554659 RGS22Q8NE09 1264 aa15.69■□□□□ 0.1
VTI1B-204ENST00000554659 YTHDC2Q9H6S0 1430 aaKnown RBP15.69■□□□□ 0.1
VTI1B-204ENST00000554659 VWA3AA6NCI4 1184 aa15.69■□□□□ 0.1
VTI1B-204ENST00000554659 BRD1O95696 1058 aa15.69■□□□□ 0.1
VTI1B-204ENST00000554659 MIGA1Q8NAN2 632 aa15.69■□□□□ 0.1
VTI1B-204ENST00000554659 SETDB2Q96T68 719 aa15.69■□□□□ 0.1
VTI1B-204ENST00000554659 NAP1L4Q99733 375 aaKnown RBP15.69■□□□□ 0.1
VTI1B-204ENST00000554659 MCM9Q9NXL9 1143 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms