RNA–Protein interactions for RNA: ENST00000554511.1

PPP4R3A-203, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 3

Gene PPP4R3A, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-203ENST00000554511 GMPSP49915 693 aaPredicted RBP22.12■■□□□ 1.13
PPP4R3A-203ENST00000554511 FMR1Q06787 632 aaKnown RBP eCLIP22.12■■□□□ 1.135e-7■■■■□ 19.4
PPP4R3A-203ENST00000554511 TSHZ3Q63HK5 1081 aa22.12■■□□□ 1.13
PPP4R3A-203ENST00000554511 PAG1Q9NWQ8 432 aa22.12■■□□□ 1.13
PPP4R3A-203ENST00000554511 ABT1Q9ULW3 272 aaKnown RBP22.12■■□□□ 1.13
PPP4R3A-203ENST00000554511 SUGT1Q9Y2Z0 365 aa22.12■■□□□ 1.13
PPP4R3A-203ENST00000554511 MYO3BQ8WXR4 1341 aa22.11■■□□□ 1.13
PPP4R3A-203ENST00000554511 SALL1Q9NSC2 1324 aa22.11■■□□□ 1.13
PPP4R3A-203ENST00000554511 YDJCA8MPS7 323 aa22.11■■□□□ 1.13
PPP4R3A-203ENST00000554511 TRIM6-TRIM34B2RNG4 842 aa22.11■■□□□ 1.13
PPP4R3A-203ENST00000554511 SCARF1Q14162 830 aa22.11■■□□□ 1.13
PPP4R3A-203ENST00000554511 TTC22Q5TAA0 569 aa22.11■■□□□ 1.13
PPP4R3A-203ENST00000554511 EVI5LQ96CN4 794 aa22.11■■□□□ 1.13
PPP4R3A-203ENST00000554511 FOXN1O15353 648 aa22.1■■□□□ 1.13
PPP4R3A-203ENST00000554511 MFSD14BQ5SR56 506 aa22.1■■□□□ 1.13
PPP4R3A-203ENST00000554511 TICAM2Q86XR7 235 aa22.1■■□□□ 1.13
PPP4R3A-203ENST00000554511 LRP2BPQ9P2M1 347 aa22.1■■□□□ 1.13
PPP4R3A-203ENST00000554511 ABCF2Q9UG63 623 aa22.1■■□□□ 1.13
PPP4R3A-203ENST00000554511 GOLIM4O00461 696 aa22.09■■□□□ 1.13
PPP4R3A-203ENST00000554511 CAPN15O75808 1086 aa22.09■■□□□ 1.13
PPP4R3A-203ENST00000554511 CYP2E1P05181 493 aaPredicted RBP22.09■■□□□ 1.13
PPP4R3A-203ENST00000554511 VIL1P09327 827 aaKnown RBP22.09■■□□□ 1.13
PPP4R3A-203ENST00000554511 MMP14P50281 582 aa22.09■■□□□ 1.13
PPP4R3A-203ENST00000554511 ZSCAN25Q6NSZ9 544 aa22.09■■□□□ 1.13
PPP4R3A-203ENST00000554511 TMED8Q6PL24 325 aaPredicted RBP22.09■■□□□ 1.13
PPP4R3A-203ENST00000554511 ERICH6Q7L0X2 663 aa22.09■■□□□ 1.13
PPP4R3A-203ENST00000554511 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.09■■□□□ 1.134e-6■■■■□ 23.9
PPP4R3A-203ENST00000554511 TRAF5O00463 557 aa22.08■■□□□ 1.13
PPP4R3A-203ENST00000554511 LDHBP07195 334 aaKnown RBP22.08■■□□□ 1.13
PPP4R3A-203ENST00000554511 RPS12P25398 132 aaKnown RBP22.08■■□□□ 1.13
PPP4R3A-203ENST00000554511 MAP3K12Q12852 859 aa22.08■■□□□ 1.13
PPP4R3A-203ENST00000554511 DACT2Q5SW24 774 aa22.08■■□□□ 1.13
PPP4R3A-203ENST00000554511 RSBN1LQ6PCB5 846 aaPredicted RBP22.08■■□□□ 1.13
PPP4R3A-203ENST00000554511 AGBL3Q8NEM8 1001 aa22.08■■□□□ 1.13
PPP4R3A-203ENST00000554511 KCNQ5Q9NR82 932 aa22.08■■□□□ 1.13
PPP4R3A-203ENST00000554511 PSMD14O00487 310 aa22.07■■□□□ 1.12
PPP4R3A-203ENST00000554511 PI16Q6UXB8 463 aa22.07■■□□□ 1.12
PPP4R3A-203ENST00000554511 SLF2Q8IX21 1173 aa22.07■■□□□ 1.12
PPP4R3A-203ENST00000554511 RILPL2Q969X0 211 aa22.07■■□□□ 1.12
PPP4R3A-203ENST00000554511 AIDAQ96BJ3 306 aa22.07■■□□□ 1.12
PPP4R3A-203ENST00000554511 JAG2Q9Y219 1238 aa22.07■■□□□ 1.12
PPP4R3A-203ENST00000554511 MAST3O60307 1309 aa22.06■■□□□ 1.12
PPP4R3A-203ENST00000554511 WDR33Q9C0J8 1336 aaKnown RBP22.06■■□□□ 1.12
PPP4R3A-203ENST00000554511 BMP2KLQ5H9B9 411 aa22.06■■□□□ 1.12
PPP4R3A-203ENST00000554511 CST9Q5W186 159 aa22.06■■□□□ 1.12
PPP4R3A-203ENST00000554511 RAI14Q9P0K7 980 aa22.06■■□□□ 1.12
PPP4R3A-203ENST00000554511 MAP4K4O95819 1239 aaPredicted RBP22.05■■□□□ 1.12
PPP4R3A-203ENST00000554511 GSTO1P78417 241 aa22.05■■□□□ 1.12
PPP4R3A-203ENST00000554511 TBC1D9Q6ZT07 1266 aa22.05■■□□□ 1.12
PPP4R3A-203ENST00000554511 OGFOD1Q8N543 542 aa22.05■■□□□ 1.12
PPP4R3A-203ENST00000554511 KBTBD3Q8NAB2 608 aa22.05■■□□□ 1.12
PPP4R3A-203ENST00000554511 FSD1Q9BTV5 496 aa22.05■■□□□ 1.12
PPP4R3A-203ENST00000554511 WBP1LQ9NX94 342 aa22.05■■□□□ 1.12
PPP4R3A-203ENST00000554511 CNOT7Q9UIV1 285 aaKnown RBP22.05■■□□□ 1.12
PPP4R3A-203ENST00000554511 HDAC9Q9UKV0 1011 aa22.05■■□□□ 1.12
PPP4R3A-203ENST00000554511 NDUFB9Q9Y6M9 179 aa22.05■■□□□ 1.12
PPP4R3A-203ENST00000554511 IDH1O75874 414 aaKnown RBP22.04■■□□□ 1.12
PPP4R3A-203ENST00000554511 LDHCP07864 332 aa22.04■■□□□ 1.12
PPP4R3A-203ENST00000554511 ZFYP08048 801 aaPredicted RBP22.04■■□□□ 1.12
PPP4R3A-203ENST00000554511 CTCFP49711 727 aaPredicted RBP22.04■■□□□ 1.12
PPP4R3A-203ENST00000554511 HIRAP54198 1017 aaPredicted RBP22.04■■□□□ 1.12
PPP4R3A-203ENST00000554511 SKAP1Q86WV1 359 aa22.04■■□□□ 1.12
PPP4R3A-203ENST00000554511 DZIP1Q86YF9 867 aaKnown RBP22.04■■□□□ 1.12
PPP4R3A-203ENST00000554511 ANTXR1Q9H6X2 564 aa22.04■■□□□ 1.12
PPP4R3A-203ENST00000554511 PGAP2Q9UHJ9 254 aa22.04■■□□□ 1.12
PPP4R3A-203ENST00000554511 SHTN1A0MZ66 631 aa22.03■■□□□ 1.12
PPP4R3A-203ENST00000554511 H7C1D1 291 aa22.03■■□□□ 1.12
PPP4R3A-203ENST00000554511 HIP1O00291 1037 aa22.03■■□□□ 1.12
PPP4R3A-203ENST00000554511 PAXIP1Q6ZW49 1069 aaPredicted RBP22.03■■□□□ 1.12
PPP4R3A-203ENST00000554511 TRPM4Q8TD43 1214 aa22.03■■□□□ 1.12
PPP4R3A-203ENST00000554511 DPF2Q92785 391 aa22.03■■□□□ 1.12
PPP4R3A-203ENST00000554511 MRIQ9BWK5 157 aa22.03■■□□□ 1.12
PPP4R3A-203ENST00000554511 GLIS2Q9BZE0 524 aaPredicted RBP22.03■■□□□ 1.12
PPP4R3A-203ENST00000554511 PIH1D3Q9NQM4 214 aaKnown RBP22.03■■□□□ 1.12
PPP4R3A-203ENST00000554511 ZBTB12Q9Y330 459 aaPredicted RBP22.03■■□□□ 1.12
PPP4R3A-203ENST00000554511 COL1A1P02452 1464 aaPredicted RBP22.03■■□□□ 1.12
PPP4R3A-203ENST00000554511 GSPT1P15170 499 aaKnown RBP22.02■■□□□ 1.12
PPP4R3A-203ENST00000554511 MICALL2Q8IY33 904 aa22.02■■□□□ 1.12
PPP4R3A-203ENST00000554511 ZC3H15Q8WU90 426 aaKnown RBP22.02■■□□□ 1.12
PPP4R3A-203ENST00000554511 PRDM10Q9NQV6 1147 aa22.02■■□□□ 1.12
PPP4R3A-203ENST00000554511 TTF2Q9UNY4 1162 aaKnown RBP22.02■■□□□ 1.12
PPP4R3A-203ENST00000554511 MYH13Q9UKX3 1938 aa22.02■■□□□ 1.11
PPP4R3A-203ENST00000554511 USP17L8P0C7I0 530 aa22.01■■□□□ 1.11
PPP4R3A-203ENST00000554511 SDSP20132 328 aa22.01■■□□□ 1.11
PPP4R3A-203ENST00000554511 HDLBPQ00341 1268 aaKnown RBP22.01■■□□□ 1.11
PPP4R3A-203ENST00000554511 MAP2K1Q02750 393 aaPredicted RBP22.01■■□□□ 1.11
PPP4R3A-203ENST00000554511 SLC9C2Q5TAH2 1124 aa22.01■■□□□ 1.11
PPP4R3A-203ENST00000554511 CERS5Q8N5B7 392 aa22.01■■□□□ 1.11
PPP4R3A-203ENST00000554511 EDC3Q96F86 508 aaKnown RBP22.01■■□□□ 1.11
PPP4R3A-203ENST00000554511 CAPNS2Q96L46 248 aa22.01■■□□□ 1.11
PPP4R3A-203ENST00000554511 TLL2Q9Y6L7 1015 aa22.01■■□□□ 1.11
PPP4R3A-203ENST00000554511 AKAP11Q9UKA4 1901 aa22■■□□□ 1.11
PPP4R3A-203ENST00000554511 CELF2O95319 508 aaKnown RBP22■■□□□ 1.11
PPP4R3A-203ENST00000554511 PRDX5P30044 214 aa22■■□□□ 1.11
PPP4R3A-203ENST00000554511 ECE1P42892 770 aa22■■□□□ 1.11
PPP4R3A-203ENST00000554511 GRM1Q13255 1194 aa22■■□□□ 1.11
PPP4R3A-203ENST00000554511 NAA16Q6N069 864 aaPredicted RBP22■■□□□ 1.11
PPP4R3A-203ENST00000554511 CYP4F22Q6NT55 531 aa22■■□□□ 1.11
PPP4R3A-203ENST00000554511 CASC1Q6TDU7 716 aa22■■□□□ 1.11
PPP4R3A-203ENST00000554511 KIAA0825Q8IV33 1275 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms