RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 IRX3P78415 501 aaPredicted RBP19.56■□□□□ 0.72
PPP4R3A-202ENST00000554390 SCARF1Q14162 830 aa19.56■□□□□ 0.72
PPP4R3A-202ENST00000554390 STK38Q15208 465 aa19.56■□□□□ 0.72
PPP4R3A-202ENST00000554390 TRIM65Q6PJ69 517 aa19.56■□□□□ 0.72
PPP4R3A-202ENST00000554390 ATG9AQ7Z3C6 839 aa19.56■□□□□ 0.72
PPP4R3A-202ENST00000554390 KIF28PB7ZC32 967 aa19.56■□□□□ 0.72
PPP4R3A-202ENST00000554390 PHKG2P15735 406 aa19.56■□□□□ 0.72
PPP4R3A-202ENST00000554390 CCDC158Q5M9N0 1113 aa19.56■□□□□ 0.72
PPP4R3A-202ENST00000554390 SYNE4Q8N205 404 aa19.56■□□□□ 0.72
PPP4R3A-202ENST00000554390 ZFP91Q96JP5 570 aaPredicted RBP19.56■□□□□ 0.72
PPP4R3A-202ENST00000554390 SRRTQ9BXP5 876 aaKnown RBP19.56■□□□□ 0.72
PPP4R3A-202ENST00000554390 INCENPQ9NQS7 918 aa19.56■□□□□ 0.72
PPP4R3A-202ENST00000554390 KDM6AO15550 1401 aaPredicted RBP19.56■□□□□ 0.72
PPP4R3A-202ENST00000554390 EVCP57679 992 aa19.56■□□□□ 0.72
PPP4R3A-202ENST00000554390 CC2D1AQ6P1N0 951 aaPredicted RBP19.56■□□□□ 0.72
PPP4R3A-202ENST00000554390 LRP10Q7Z4F1 713 aa19.56■□□□□ 0.72
PPP4R3A-202ENST00000554390 SPECC1Q5M775 1068 aa19.55■□□□□ 0.72
PPP4R3A-202ENST00000554390 EFCC1Q9HA90 598 aa19.55■□□□□ 0.72
PPP4R3A-202ENST00000554390 A0A1B0GUL7 405 aa19.55■□□□□ 0.72
PPP4R3A-202ENST00000554390 NBPF26B4DH59 902 aa19.55■□□□□ 0.72
PPP4R3A-202ENST00000554390 GYS2P54840 703 aa19.55■□□□□ 0.72
PPP4R3A-202ENST00000554390 NBPF14Q5TI25 921 aa19.55■□□□□ 0.72
PPP4R3A-202ENST00000554390 NBPF10Q6P3W6 841 aaKnown RBP19.55■□□□□ 0.72
PPP4R3A-202ENST00000554390 NBPF15Q8N660 670 aa19.55■□□□□ 0.72
PPP4R3A-202ENST00000554390 CARMIL3Q8ND23 1372 aa19.54■□□□□ 0.72
PPP4R3A-202ENST00000554390 KLF18A0A0U1RQI7 1052 aa19.54■□□□□ 0.72
PPP4R3A-202ENST00000554390 TPM1P09493 284 aa19.54■□□□□ 0.72
PPP4R3A-202ENST00000554390 REXO1L1PQ8IX06 675 aa19.54■□□□□ 0.72
PPP4R3A-202ENST00000554390 EXOSC10Q01780 885 aaKnown RBP19.54■□□□□ 0.72
PPP4R3A-202ENST00000554390 LRRFIP1Q32MZ4 808 aaKnown RBP19.54■□□□□ 0.72
PPP4R3A-202ENST00000554390 TAF7LQ5H9L4 462 aa19.54■□□□□ 0.72
PPP4R3A-202ENST00000554390 GOLGA8BA8MQT2 603 aa19.53■□□□□ 0.72
PPP4R3A-202ENST00000554390 SNRPA1P09661 255 aaKnown RBP19.53■□□□□ 0.72
PPP4R3A-202ENST00000554390 ZRSR1Q15695 479 aaKnown RBP19.53■□□□□ 0.72
PPP4R3A-202ENST00000554390 MYL10Q9BUA6 226 aa19.53■□□□□ 0.72
PPP4R3A-202ENST00000554390 PARP3Q9Y6F1 533 aa19.53■□□□□ 0.72
PPP4R3A-202ENST00000554390 USP54Q70EL1 1684 aa19.53■□□□□ 0.72
PPP4R3A-202ENST00000554390 CCP110O43303 1012 aa19.53■□□□□ 0.72
PPP4R3A-202ENST00000554390 TATP17735 454 aaPredicted RBP19.53■□□□□ 0.72
PPP4R3A-202ENST00000554390 FOXO4P98177 505 aa19.53■□□□□ 0.72
PPP4R3A-202ENST00000554390 SENP2Q9HC62 589 aa19.53■□□□□ 0.72
PPP4R3A-202ENST00000554390 NCAPD2Q15021 1401 aa19.53■□□□□ 0.72
PPP4R3A-202ENST00000554390 FMR1NBQ8N0W7 255 aaPredicted RBP19.53■□□□□ 0.72
PPP4R3A-202ENST00000554390 MRPS27Q92552 414 aaKnown RBP19.53■□□□□ 0.72
PPP4R3A-202ENST00000554390 CWC15Q9P013 229 aaKnown RBP19.53■□□□□ 0.72
PPP4R3A-202ENST00000554390 PALLDQ8WX93 1383 aa19.52■□□□□ 0.72
PPP4R3A-202ENST00000554390 PHKBQ93100 1093 aa19.52■□□□□ 0.72
PPP4R3A-202ENST00000554390 C8orf76Q96K31 380 aa19.52■□□□□ 0.72
PPP4R3A-202ENST00000554390 CABP4P57796 275 aa19.52■□□□□ 0.71
PPP4R3A-202ENST00000554390 CCDC82Q8N4S0 544 aa19.52■□□□□ 0.71
PPP4R3A-202ENST00000554390 ZNF396Q96N95 335 aaPredicted RBP19.52■□□□□ 0.71
PPP4R3A-202ENST00000554390 PUS7LQ9H0K6 701 aaKnown RBP19.52■□□□□ 0.71
PPP4R3A-202ENST00000554390 JCADQ9P266 1359 aa19.52■□□□□ 0.71
PPP4R3A-202ENST00000554390 NOP2P46087 812 aaKnown RBP19.51■□□□□ 0.71
PPP4R3A-202ENST00000554390 LMAN1P49257 510 aa19.51■□□□□ 0.71
PPP4R3A-202ENST00000554390 NAA16Q6N069 864 aaPredicted RBP19.51■□□□□ 0.71
PPP4R3A-202ENST00000554390 FBXO18Q8NFZ0 1043 aa19.51■□□□□ 0.71
PPP4R3A-202ENST00000554390 DPF2Q92785 391 aa19.51■□□□□ 0.71
PPP4R3A-202ENST00000554390 AK7Q96M32 723 aa19.51■□□□□ 0.71
PPP4R3A-202ENST00000554390 CLIC6Q96NY7 704 aa19.51■□□□□ 0.71
PPP4R3A-202ENST00000554390 KIAA1468Q9P260 1216 aa19.51■□□□□ 0.71
PPP4R3A-202ENST00000554390 FER1L4A9Z1Z3 1794 aa19.51■□□□□ 0.71
PPP4R3A-202ENST00000554390 GNL2Q13823 731 aaKnown RBP19.51■□□□□ 0.71
PPP4R3A-202ENST00000554390 GOLGA5Q8TBA6 731 aa19.51■□□□□ 0.71
PPP4R3A-202ENST00000554390 ADAM21Q9UKJ8 722 aa19.51■□□□□ 0.71
PPP4R3A-202ENST00000554390 FOXP2O15409 715 aa19.5■□□□□ 0.71
PPP4R3A-202ENST00000554390 CASQ1P31415 396 aa19.5■□□□□ 0.71
PPP4R3A-202ENST00000554390 DHX8Q14562 1220 aaKnown RBP19.5■□□□□ 0.71
PPP4R3A-202ENST00000554390 ANKLE2Q86XL3 938 aa19.5■□□□□ 0.71
PPP4R3A-202ENST00000554390 UTP14AQ9BVJ6 771 aaKnown RBP19.5■□□□□ 0.71
PPP4R3A-202ENST00000554390 ARFGAP3Q9NP61 516 aa19.5■□□□□ 0.71
PPP4R3A-202ENST00000554390 CPLX1O14810 134 aa19.5■□□□□ 0.71
PPP4R3A-202ENST00000554390 PRC1O43663 620 aa19.5■□□□□ 0.71
PPP4R3A-202ENST00000554390 DHX16O60231 1041 aaKnown RBP19.5■□□□□ 0.71
PPP4R3A-202ENST00000554390 FGAP02671 866 aa19.5■□□□□ 0.71
PPP4R3A-202ENST00000554390 CASP7P55210 303 aa19.5■□□□□ 0.71
PPP4R3A-202ENST00000554390 ZMYM1Q5SVZ6 1142 aa19.5■□□□□ 0.71
PPP4R3A-202ENST00000554390 SRLQ86TD4 932 aa19.5■□□□□ 0.71
PPP4R3A-202ENST00000554390 LINC00301Q8NCQ3 95 aa19.5■□□□□ 0.71
PPP4R3A-202ENST00000554390 BPIFA3Q9BQP9 254 aa19.5■□□□□ 0.71
PPP4R3A-202ENST00000554390 ATG3Q9NT62 314 aa19.5■□□□□ 0.71
PPP4R3A-202ENST00000554390 WDHD1O75717 1129 aaPredicted RBP19.5■□□□□ 0.71
PPP4R3A-202ENST00000554390 RABL6Q3YEC7 729 aaPredicted RBP19.5■□□□□ 0.71
PPP4R3A-202ENST00000554390 GPR161Q8N6U8 529 aaKnown RBP19.5■□□□□ 0.71
PPP4R3A-202ENST00000554390 MROH7-TTC4A0A0A0MT08 1334 aa19.49■□□□□ 0.71
PPP4R3A-202ENST00000554390 FUT8Q9BYC5 575 aa19.49■□□□□ 0.71
PPP4R3A-202ENST00000554390 ZNF202O95125 648 aa19.49■□□□□ 0.71
PPP4R3A-202ENST00000554390 ZAP70P43403 619 aa19.49■□□□□ 0.71
PPP4R3A-202ENST00000554390 FANCCQ00597 558 aa19.49■□□□□ 0.71
PPP4R3A-202ENST00000554390 NCAPHQ15003 741 aa19.49■□□□□ 0.71
PPP4R3A-202ENST00000554390 EXOC4Q96A65 974 aa19.49■□□□□ 0.71
PPP4R3A-202ENST00000554390 FAM89AQ96GI7 184 aa19.49■□□□□ 0.71
PPP4R3A-202ENST00000554390 RRP15Q9Y3B9 282 aaKnown RBP19.49■□□□□ 0.71
PPP4R3A-202ENST00000554390 RNF113AO15541 343 aaKnown RBP19.48■□□□□ 0.71
PPP4R3A-202ENST00000554390 IFNL2Q8IZJ0 200 aa19.48■□□□□ 0.71
PPP4R3A-202ENST00000554390 PARD6BQ9BYG5 372 aa19.48■□□□□ 0.71
PPP4R3A-202ENST00000554390 MEGF6O75095 1541 aa19.48■□□□□ 0.71
PPP4R3A-202ENST00000554390 C5P01031 1676 aa19.48■□□□□ 0.71
PPP4R3A-202ENST00000554390 SPTLC2O15270 562 aa19.48■□□□□ 0.71
PPP4R3A-202ENST00000554390 FOXN1O15353 648 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms