RNA–Protein interactions for RNA: ENST00000554306.1

KTN1-213, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-213ENST00000554306 SPOCK3Q9BQ16 436 aa9.05□□□□□ -0.96
KTN1-213ENST00000554306 ROBO1Q9Y6N7 1651 aa9.04□□□□□ -0.96
KTN1-213ENST00000554306 CC2D1BQ5T0F9 858 aaKnown RBP9.04□□□□□ -0.96
KTN1-213ENST00000554306 BRINP3Q76B58 766 aa9.04□□□□□ -0.96
KTN1-213ENST00000554306 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.04□□□□□ -0.96
KTN1-213ENST00000554306 ANKRD26Q9UPS8 1709 aa9.04□□□□□ -0.96
KTN1-213ENST00000554306 USP6P35125 1406 aa9.04□□□□□ -0.96
KTN1-213ENST00000554306 TTC21BQ7Z4L5 1316 aa9.04□□□□□ -0.96
KTN1-213ENST00000554306 TTC21AQ8NDW8 1320 aa9.04□□□□□ -0.96
KTN1-213ENST00000554306 NHSL1Q5SYE7 1610 aa9.03□□□□□ -0.96
KTN1-213ENST00000554306 KRBA1A5PL33 1030 aa9.03□□□□□ -0.96
KTN1-213ENST00000554306 ADARB2-AS1A8MUL3 147 aa9.03□□□□□ -0.96
KTN1-213ENST00000554306 ITGB2P05107 769 aa9.03□□□□□ -0.96
KTN1-213ENST00000554306 IGFBP4P22692 258 aa9.03□□□□□ -0.96
KTN1-213ENST00000554306 PIP4K2BP78356 416 aa9.03□□□□□ -0.96
KTN1-213ENST00000554306 TYRO3Q06418 890 aa9.03□□□□□ -0.96
KTN1-213ENST00000554306 SPEM2Q0P670 501 aa9.03□□□□□ -0.96
KTN1-213ENST00000554306 ZNF280CQ8ND82 737 aa9.03□□□□□ -0.96
KTN1-213ENST00000554306 TNFRSF25Q93038 417 aa9.03□□□□□ -0.96
KTN1-213ENST00000554306 SLC30A3Q99726 388 aa9.03□□□□□ -0.96
KTN1-213ENST00000554306 SUV39H2Q9H5I1 410 aa9.03□□□□□ -0.96
KTN1-213ENST00000554306 KCNH4Q9UQ05 1017 aa9.03□□□□□ -0.96
KTN1-213ENST00000554306 NRKQ7Z2Y5 1582 aa9.03□□□□□ -0.96
KTN1-213ENST00000554306 NSD2O96028 1365 aa9.02□□□□□ -0.97
KTN1-213ENST00000554306 XPCQ01831 940 aaPredicted RBP9.02□□□□□ -0.97
KTN1-213ENST00000554306 RALBP1Q15311 655 aa9.02□□□□□ -0.97
KTN1-213ENST00000554306 MORC1Q86VD1 984 aa9.02□□□□□ -0.97
KTN1-213ENST00000554306 ABTB2Q8N961 1025 aa9.02□□□□□ -0.97
KTN1-213ENST00000554306 NGLY1Q96IV0 654 aa9.02□□□□□ -0.97
KTN1-213ENST00000554306 MDFIQ99750 246 aa9.02□□□□□ -0.97
KTN1-213ENST00000554306 TRPM3Q9HCF6 1732 aaPredicted RBP9.02□□□□□ -0.97
KTN1-213ENST00000554306 NPC1L1Q9UHC9 1359 aa9.01□□□□□ -0.97
KTN1-213ENST00000554306 FYB1O15117 783 aa9.01□□□□□ -0.97
KTN1-213ENST00000554306 PHLPP1O60346 1717 aa9.01□□□□□ -0.97
KTN1-213ENST00000554306 PROCP04070 461 aa9.01□□□□□ -0.97
KTN1-213ENST00000554306 RTN1Q16799 776 aa9.01□□□□□ -0.97
KTN1-213ENST00000554306 BTLAQ7Z6A9 289 aa9.01□□□□□ -0.97
KTN1-213ENST00000554306 COG3Q96JB2 828 aa9.01□□□□□ -0.97
KTN1-213ENST00000554306 GGNBP2Q9H3C7 697 aa9.01□□□□□ -0.97
KTN1-213ENST00000554306 SBNO1A3KN83 1393 aa9□□□□□ -0.97
KTN1-213ENST00000554306 SSH2Q76I76 1423 aa9□□□□□ -0.97
KTN1-213ENST00000554306 IER5Q5VY09 327 aa9□□□□□ -0.97
KTN1-213ENST00000554306 NME9Q86XW9 330 aa9□□□□□ -0.97
KTN1-213ENST00000554306 DDX17Q92841 729 aaKnown RBP9□□□□□ -0.97
KTN1-213ENST00000554306 EFCC1Q9HA90 598 aa9□□□□□ -0.97
KTN1-213ENST00000554306 AHDC1Q5TGY3 1603 aaPredicted RBP8.99□□□□□ -0.97
KTN1-213ENST00000554306 NLRP13Q86W25 1043 aa8.99□□□□□ -0.97
KTN1-213ENST00000554306 ARXQ96QS3 562 aa8.99□□□□□ -0.97
KTN1-213ENST00000554306 PRKRIP1Q9H875 184 aaPredicted RBP8.99□□□□□ -0.97
KTN1-213ENST00000554306 PXDNQ92626 1479 aa8.99□□□□□ -0.97
KTN1-213ENST00000554306 PIK3C2AO00443 1686 aa8.99□□□□□ -0.97
KTN1-213ENST00000554306 ALS2Q96Q42 1657 aa8.99□□□□□ -0.97
KTN1-213ENST00000554306 MAP2P11137 1827 aaKnown RBP8.98□□□□□ -0.97
KTN1-213ENST00000554306 SPDYE3A6NKU9 549 aa8.98□□□□□ -0.97
KTN1-213ENST00000554306 NUTM2GQ5VZR2 741 aa8.98□□□□□ -0.97
KTN1-213ENST00000554306 LRRC59Q96AG4 307 aaKnown RBP8.98□□□□□ -0.97
KTN1-213ENST00000554306 SPATA31A3Q5VYP0 1347 aa8.98□□□□□ -0.97
KTN1-213ENST00000554306 ARHGEF10O15013 1369 aa8.98□□□□□ -0.97
KTN1-213ENST00000554306 USP31Q70CQ4 1352 aa8.98□□□□□ -0.97
KTN1-213ENST00000554306 USP54Q70EL1 1684 aa8.97□□□□□ -0.97
KTN1-213ENST00000554306 TNS3Q68CZ2 1445 aa8.97□□□□□ -0.97
KTN1-213ENST00000554306 TGFBR3LH3BV60 316 aa8.97□□□□□ -0.97
KTN1-213ENST00000554306 ADH7P40394 386 aa8.97□□□□□ -0.97
KTN1-213ENST00000554306 TNNT2P45379 298 aaPredicted RBP8.97□□□□□ -0.97
KTN1-213ENST00000554306 FAM200AQ8TCP9 573 aa8.97□□□□□ -0.97
KTN1-213ENST00000554306 TRIM11Q96F44 468 aa8.97□□□□□ -0.97
KTN1-213ENST00000554306 PLVAPQ9BX97 442 aa8.97□□□□□ -0.97
KTN1-213ENST00000554306 PRDM6Q9NQX0 595 aa8.97□□□□□ -0.97
KTN1-213ENST00000554306 MYBBP1AQ9BQG0 1328 aaKnown RBP8.97□□□□□ -0.97
KTN1-213ENST00000554306 PARD3Q8TEW0 1356 aa8.97□□□□□ -0.97
KTN1-213ENST00000554306 EPB42P16452 691 aa8.96□□□□□ -0.98
KTN1-213ENST00000554306 RFX1P22670 979 aa8.96□□□□□ -0.98
KTN1-213ENST00000554306 WEE1P30291 646 aa8.96□□□□□ -0.98
KTN1-213ENST00000554306 RAB44Q7Z6P3 723 aaPredicted RBP8.96□□□□□ -0.98
KTN1-213ENST00000554306 KCNH5Q8NCM2 988 aa8.96□□□□□ -0.98
KTN1-213ENST00000554306 BHMTQ93088 406 aa8.96□□□□□ -0.98
KTN1-213ENST00000554306 VTI1AQ96AJ9 217 aa8.96□□□□□ -0.98
KTN1-213ENST00000554306 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.96□□□□□ -0.98
KTN1-213ENST00000554306 MARF1Q9Y4F3 1742 aaKnown RBP8.95□□□□□ -0.98
KTN1-213ENST00000554306 M0R082 166 aa8.95□□□□□ -0.98
KTN1-213ENST00000554306 LGR5O75473 907 aa8.95□□□□□ -0.98
KTN1-213ENST00000554306 SPATA31C1P0DKV0 1188 aa8.95□□□□□ -0.98
KTN1-213ENST00000554306 PPP2R1AP30153 589 aa8.95□□□□□ -0.98
KTN1-213ENST00000554306 ZNF417Q8TAU3 575 aa8.95□□□□□ -0.98
KTN1-213ENST00000554306 ZNF587Q96SQ5 575 aaPredicted RBP8.95□□□□□ -0.98
KTN1-213ENST00000554306 OVOS2A0A0J9YW53 1432 aa8.95□□□□□ -0.98
KTN1-213ENST00000554306 OVOS2Q6IE36 1432 aa8.95□□□□□ -0.98
KTN1-213ENST00000554306 COL16A1Q07092 1604 aaPredicted RBP8.94□□□□□ -0.98
KTN1-213ENST00000554306 LTN1O94822 1766 aa8.94□□□□□ -0.98
KTN1-213ENST00000554306 C1QTNF9BB2RNN3 333 aa8.94□□□□□ -0.98
KTN1-213ENST00000554306 CFAP53Q96M91 514 aa8.94□□□□□ -0.98
KTN1-213ENST00000554306 PNMA5Q96PV4 448 aa8.94□□□□□ -0.98
KTN1-213ENST00000554306 PHRF1Q9P1Y6 1649 aaKnown RBP8.94□□□□□ -0.98
KTN1-213ENST00000554306 LOC100996750A0A140TA64 210 aa8.93□□□□□ -0.98
KTN1-213ENST00000554306 CCER2I3L3R5 266 aa8.93□□□□□ -0.98
KTN1-213ENST00000554306 PPM1GO15355 546 aaPredicted RBP8.93□□□□□ -0.98
KTN1-213ENST00000554306 BAG6P46379 1132 aa8.93□□□□□ -0.98
KTN1-213ENST00000554306 PRRT3Q5FWE3 981 aa8.93□□□□□ -0.98
KTN1-213ENST00000554306 MICALL1Q8N3F8 863 aa8.93□□□□□ -0.98
KTN1-213ENST00000554306 KRTAP4-6Q9BYQ5 205 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms